| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is fabG [H]
Identifier: 159899675
GI number: 159899675
Start: 3985844
End: 3986671
Strand: Reverse
Name: fabG [H]
Synonym: Haur_3157
Alternate gene names: 159899675
Gene position: 3986671-3985844 (Counterclockwise)
Preceding gene: 159899676
Following gene: 159899672
Centisome position: 62.82
GC content: 53.26
Gene sequence:
>828_bases ATGGCGTTATTGGCCGAGAAAGTGGCGTTAATTACTGGGGCTGGGCGTGGGATTGGAGCGGCGGCAGCGCGATTGTTTAG CCAACACGGGGCGCGGGTAGTCTTGTGCGATTTGGATGCTGCGCCCGTTGAGCAATTAGCGGCTGAATTAAAAGCTGCTG GCGGCCAAGCCTTAGCGTTTGCTGGCGATGTGACCAGTGCTGAATTTGCGCCGCAAGCAATTGCCGCCACTTTGGAGCAC TTCGGCGGCTTAGATGTATTGGTCAACAATGCTGGCTATACGTGGGATGGCGTGTTGCACACCATGGATGATGCCCAATG GCAAGCCATGCTCGATGTGCATTTATCGGCTCCCTTTCGGCTGATTCGGGCAGCGGCTCCCTATTTGCGCGATACCGCCA AAGCCGAAATTAAGGCTCATGGCGCGGCCAAAGCCCGTAAAATTATCAATGTTTCTTCGGTTTCGGGCGTGTATGGCAAT GCTGGGCAGGTCAATTATTCGGCGGCTAAATCAGGTGTGATTGGCCTAACCAAAACTCTTGCCAAGGAATGGGGCCGTTT TAATGTCCAAACCAATGCGGTTTGCTATGGCTTTATTGAAACTCGCTTGACCGCTGCCAAAGAGCAGGGCGAGACGATTC AACGCGGCGATCAGGCGATTAAACTTGGTGTGCCCGAAAATCTCATGGCTGGAATTACCATGTTTCATCCCATGGGGCGG GCTGGTACACCGGAAGAAGCGGCTGGCCCGATGGTCTTTTTAGCTTCGAGCTTGGCTAATTATGTGAACGGCGAAATTCT CGAGGTAACTGGTGGTATGGGGATTTAG
Upstream 100 bases:
>100_bases TGGAAGTAACGCCTAAAACAAGCATTAGCAATTGCTCAATGGCATTTTGGCCCAAGGTTTAGTATGATCTCCATATACTA GCTGTTTTTGGAGGTAGACA
Downstream 100 bases:
>100_bases TTAATCTAAAATATTTAAGGTGCAGGGAAAATAGCCCCTGCACCTCTGTTTTATAGATTGCGAATTGCTCTTAGTAACGC TAATCCTTAATTTCGTGCCC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MALLAEKVALITGAGRGIGAAAARLFSQHGARVVLCDLDAAPVEQLAAELKAAGGQALAFAGDVTSAEFAPQAIAATLEH FGGLDVLVNNAGYTWDGVLHTMDDAQWQAMLDVHLSAPFRLIRAAAPYLRDTAKAEIKAHGAAKARKIINVSSVSGVYGN AGQVNYSAAKSGVIGLTKTLAKEWGRFNVQTNAVCYGFIETRLTAAKEQGETIQRGDQAIKLGVPENLMAGITMFHPMGR AGTPEEAAGPMVFLASSLANYVNGEILEVTGGMGI
Sequences:
>Translated_275_residues MALLAEKVALITGAGRGIGAAAARLFSQHGARVVLCDLDAAPVEQLAAELKAAGGQALAFAGDVTSAEFAPQAIAATLEH FGGLDVLVNNAGYTWDGVLHTMDDAQWQAMLDVHLSAPFRLIRAAAPYLRDTAKAEIKAHGAAKARKIINVSSVSGVYGN AGQVNYSAAKSGVIGLTKTLAKEWGRFNVQTNAVCYGFIETRLTAAKEQGETIQRGDQAIKLGVPENLMAGITMFHPMGR AGTPEEAAGPMVFLASSLANYVNGEILEVTGGMGI >Mature_274_residues ALLAEKVALITGAGRGIGAAAARLFSQHGARVVLCDLDAAPVEQLAAELKAAGGQALAFAGDVTSAEFAPQAIAATLEHF GGLDVLVNNAGYTWDGVLHTMDDAQWQAMLDVHLSAPFRLIRAAAPYLRDTAKAEIKAHGAAKARKIINVSSVSGVYGNA GQVNYSAAKSGVIGLTKTLAKEWGRFNVQTNAVCYGFIETRLTAAKEQGETIQRGDQAIKLGVPENLMAGITMFHPMGRA GTPEEAAGPMVFLASSLANYVNGEILEVTGGMGI
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=278, Percent_Identity=35.9712230215827, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI4504505, Length=197, Percent_Identity=35.5329949238579, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI32483357, Length=274, Percent_Identity=30.6569343065693, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI40254992, Length=268, Percent_Identity=30.5970149253731, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI5031737, Length=270, Percent_Identity=30.3703703703704, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI10190704, Length=272, Percent_Identity=30.1470588235294, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI59889578, Length=250, Percent_Identity=33.2, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI19923817, Length=278, Percent_Identity=26.978417266187, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI66933014, Length=273, Percent_Identity=31.5018315018315, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI33667109, Length=200, Percent_Identity=31, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI4758504, Length=278, Percent_Identity=29.4964028776978, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI31542939, Length=277, Percent_Identity=28.8808664259928, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI126723191, Length=213, Percent_Identity=29.5774647887324, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI109715829, Length=204, Percent_Identity=31.3725490196078, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI210032110, Length=204, Percent_Identity=26.9607843137255, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI126723750, Length=278, Percent_Identity=27.6978417266187, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI83715985, Length=185, Percent_Identity=34.5945945945946, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI142976729, Length=198, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4503301, Length=270, Percent_Identity=27.037037037037, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI20149619, Length=212, Percent_Identity=27.3584905660377, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI157739938, Length=209, Percent_Identity=25.3588516746411, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI224922801, Length=177, Percent_Identity=31.0734463276836, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI40254986, Length=143, Percent_Identity=32.8671328671329, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787335, Length=267, Percent_Identity=37.8277153558052, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI87082100, Length=273, Percent_Identity=31.5018315018315, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1789208, Length=269, Percent_Identity=30.4832713754647, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI87082160, Length=271, Percent_Identity=33.5793357933579, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1790717, Length=270, Percent_Identity=29.6296296296296, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787905, Length=270, Percent_Identity=27.7777777777778, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789378, Length=277, Percent_Identity=27.7978339350181, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI2367175, Length=270, Percent_Identity=29.6296296296296, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1789057, Length=271, Percent_Identity=26.5682656826568, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788459, Length=268, Percent_Identity=27.9850746268657, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786812, Length=268, Percent_Identity=27.9850746268657, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI2367365, Length=278, Percent_Identity=26.978417266187, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787526, Length=231, Percent_Identity=25.974025974026, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI25147288, Length=274, Percent_Identity=37.5912408759124, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17555706, Length=278, Percent_Identity=36.3309352517986, Blast_Score=150, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17568967, Length=198, Percent_Identity=34.3434343434343, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71994604, Length=271, Percent_Identity=30.9963099630996, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17560676, Length=273, Percent_Identity=29.3040293040293, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71994600, Length=273, Percent_Identity=31.8681318681319, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17562910, Length=286, Percent_Identity=28.6713286713287, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562904, Length=291, Percent_Identity=28.5223367697594, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17561402, Length=269, Percent_Identity=28.6245353159851, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17559104, Length=288, Percent_Identity=29.8611111111111, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17560332, Length=288, Percent_Identity=28.4722222222222, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17562990, Length=286, Percent_Identity=30.0699300699301, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17538486, Length=292, Percent_Identity=28.0821917808219, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17560150, Length=286, Percent_Identity=29.3706293706294, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17544670, Length=285, Percent_Identity=28.4210526315789, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17560220, Length=288, Percent_Identity=30.2083333333333, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17536025, Length=274, Percent_Identity=28.8321167883212, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17562908, Length=282, Percent_Identity=26.9503546099291, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17536651, Length=271, Percent_Identity=28.0442804428044, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI193204405, Length=290, Percent_Identity=27.9310344827586, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17562906, Length=288, Percent_Identity=26.0416666666667, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17564282, Length=198, Percent_Identity=30.3030303030303, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538182, Length=273, Percent_Identity=26.3736263736264, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17563726, Length=289, Percent_Identity=26.643598615917, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI72000259, Length=282, Percent_Identity=25.886524822695, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI193203117, Length=197, Percent_Identity=29.4416243654822, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI193203115, Length=197, Percent_Identity=29.4416243654822, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17531453, Length=287, Percent_Identity=27.1777003484321, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17508895, Length=207, Percent_Identity=26.5700483091787, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17551412, Length=277, Percent_Identity=26.7148014440433, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538480, Length=274, Percent_Identity=26.6423357664234, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17565030, Length=288, Percent_Identity=28.4722222222222, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17508651, Length=267, Percent_Identity=29.5880149812734, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17561272, Length=273, Percent_Identity=27.8388278388278, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=200, Percent_Identity=36.5, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6324126, Length=275, Percent_Identity=26.5454545454545, Blast_Score=69, Evalue=7e-13, Organism=Drosophila melanogaster, GI24639444, Length=272, Percent_Identity=34.9264705882353, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI18859837, Length=197, Percent_Identity=39.5939086294416, Blast_Score=120, Evalue=8e-28, Organism=Drosophila melanogaster, GI23397609, Length=274, Percent_Identity=32.8467153284672, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI21355319, Length=275, Percent_Identity=31.6363636363636, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24644339, Length=271, Percent_Identity=32.4723247232472, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI21357041, Length=275, Percent_Identity=31.2727272727273, Blast_Score=100, Evalue=7e-22, Organism=Drosophila melanogaster, GI28571526, Length=277, Percent_Identity=30.3249097472924, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24644337, Length=272, Percent_Identity=32.3529411764706, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI17737361, Length=280, Percent_Identity=25.7142857142857, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24643142, Length=272, Percent_Identity=28.3088235294118, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24640492, Length=187, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24649181, Length=218, Percent_Identity=25.2293577981651, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 28608; Mature: 28477
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLAEKVALITGAGRGIGAAAARLFSQHGARVVLCDLDAAPVEQLAAELKAAGGQALAF CCCHHHHHHEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEE AGDVTSAEFAPQAIAATLEHFGGLDVLVNNAGYTWDGVLHTMDDAQWQAMLDVHLSAPFR ECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEECCEEECCCCHHHHHEEEECCCCHHH LIRAAAPYLRDTAKAEIKAHGAAKARKIINVSSVSGVYGNAGQVNYSAAKSGVIGLTKTL HHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEHHCCCCCCCCCCEEHHHHCCCCHHHHHHH AKEWGRFNVQTNAVCYGFIETRLTAAKEQGETIQRGDQAIKLGVPENLMAGITMFHPMGR HHHCCCCCEEECCEEEEHHHHHHHHHHHCCCHHHCCCCEEEECCCHHHHHHHHHHCCCCC AGTPEEAAGPMVFLASSLANYVNGEILEVTGGMGI CCCCCHHCCCHHHHHHHHHHHHCCEEEEECCCCCC >Mature Secondary Structure ALLAEKVALITGAGRGIGAAAARLFSQHGARVVLCDLDAAPVEQLAAELKAAGGQALAF CCHHHHHHEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEE AGDVTSAEFAPQAIAATLEHFGGLDVLVNNAGYTWDGVLHTMDDAQWQAMLDVHLSAPFR ECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEECCEEECCCCHHHHHEEEECCCCHHH LIRAAAPYLRDTAKAEIKAHGAAKARKIINVSSVSGVYGNAGQVNYSAAKSGVIGLTKTL HHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEHHCCCCCCCCCCEEHHHHCCCCHHHHHHH AKEWGRFNVQTNAVCYGFIETRLTAAKEQGETIQRGDQAIKLGVPENLMAGITMFHPMGR HHHCCCCCEEECCEEEEHHHHHHHHHHHCCCHHHCCCCEEEECCCHHHHHHHHHHCCCCC AGTPEEAAGPMVFLASSLANYVNGEILEVTGGMGI CCCCCHHCCCHHHHHHHHHHHHCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]