| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899667
Identifier: 159899667
GI number: 159899667
Start: 3976873
End: 3978468
Strand: Reverse
Name: 159899667
Synonym: Haur_3149
Alternate gene names: NA
Gene position: 3978468-3976873 (Counterclockwise)
Preceding gene: 159899669
Following gene: 159899659
Centisome position: 62.69
GC content: 49.37
Gene sequence:
>1596_bases ATGCCACATCCTTGGCCAAATAAAATGCTCCGCCAATTACTCCGCGGCGAGATGTTATCGCAAACGTTGCAGCAGTGGGT CGATAATCATGGTGGTCGGCAGGTAGTTGTGCAAACGTTGCGCGATGGCATGAGCCACGATGTTGATGCACTTGCCTTCT TTGAACAGCAGGTAAATCGTTATACCACAGAAAGCCAAAAAGCTGCAAATCTTAATATGGCCGATAGCACCTACTATGCC AAACGTGGCCGTTTTTATGAGCAATTACGCCATTTGCTCGATCATCTGCCTAGCCTGCGTCCTACCACGATCATTGGTCT GCCGATTCCGCTTACGCCGTTGGTTGGCCGCCAAGCAGTGTTGCAAGAGTTGCTTGAGCTTTGCCGCGAATATCGCCTAG TAACCTTGCATGGCATTGGTGGGATCGGCAAAACCCGCCTCGCGATTGCCCTCGCTAGCTATATTGCTAATGCTGGCTTT GCCCAAGAAGTCGTTTTTATCGATTTACGCAATGAATATACGGTGCATGATAGCTGGCATGCCTTGCTTAATCGCTGGCT CGGCGACCCGAAAGCCGATTTAACCAGTTATATTCAGCAATCCAATCGCCGCACGGTCTTGATTATCGATAATTGTGAGC ATATTCGGGCAGTTGCTGAGATGCTGCTGCCATTGCTCAATTTTGGCAATATTTCGATTATTACCACCACGCAAATTGCC TTGAGCATCAATGGCGAACGACGCTTTCCCGTGCCAGCCTTGAGCCTCGAAGAAGGCATTTTGTTGTTTGAGCAACGTGC TCGCGATTTGAACCGTCAGGTTGAGCGCCGTCAAACTGAGCAAATTGTCCAGCGGTTGGCGGGGCATCCCTTGGCGATTG AAATTGCCGCTTCACAATTGTTGTTGGTTTCGCTCAACGATATTTTGGCCATGACCAACGTCGAAATGCTGGAGATCGAA TCGTTGGCGAATGGCTCGGCCTCGCATCGCACCTTGCGCCAAATGGTTGAGTATACGTTTTCGTTGTTGCATGATGATGT TCAAGCTGCTTGCCTCCGCTTAGCACTATTTGAACATCATTTTAGCTTGGCCCAAGCAACCCAAGCCTTTAAAGTCAATT GGCGGGTGGCTAGCGGTTTGGTTGATGCATCGTGTTTAGAGGGCAGTGTCGATAGCCGTGGCGAAACGCGGTTTAGTATG CCAATTGTGATTAGGCTCTACGCTCGGCAAGTAGCGCTCGAACGCGATGTCTATCATCAATTGATGCTGGAATTTACCCA ATATTGGGCCAATGAAATTAAGCAGATTTTGCAACGCTGGGAGCAAACGATCGAACGCGCCAAAGATCATGGCGAATTGC TCACGCCGATGAACGATCTTTCGTTGTTGCGCGAGAGCTACACAACGATTCGTGGCTGTTTGCAATGGGCGGCGATCTAT GAGCATACGCAATTATTGGAGTTAGTCGGCGGTTTGTGGAAGTTTTGGCTGCATTATGAAAGCCCCGAGGGTCGTTTATG GCTGCGTTCGGCCATGAGTATGGCGAGCGATCAGCAACGCAGCGAATTACAACAAATTCTATTGCTGTTTAGCTGA
Upstream 100 bases:
>100_bases CGATTGAGCCGGGTAATATTCACGGGTATAGGCCGCCGCCTGCTGCAAGGAGAGCAGTTGGCTGGCTGGTGGGTCGTAGG TTAGACCAGAGGGCTGTTCC
Downstream 100 bases:
>100_bases AGATTGGCACTGGCACATCGCCTGCCCACGTGTGTTCCCAAACCGCTTCGCCAGCCAACAAACGGCTAATTTGTTGTGGA AAGTAGGCTGGGCGAATTGG
Product: ATPase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MPHPWPNKMLRQLLRGEMLSQTLQQWVDNHGGRQVVVQTLRDGMSHDVDALAFFEQQVNRYTTESQKAANLNMADSTYYA KRGRFYEQLRHLLDHLPSLRPTTIIGLPIPLTPLVGRQAVLQELLELCREYRLVTLHGIGGIGKTRLAIALASYIANAGF AQEVVFIDLRNEYTVHDSWHALLNRWLGDPKADLTSYIQQSNRRTVLIIDNCEHIRAVAEMLLPLLNFGNISIITTTQIA LSINGERRFPVPALSLEEGILLFEQRARDLNRQVERRQTEQIVQRLAGHPLAIEIAASQLLLVSLNDILAMTNVEMLEIE SLANGSASHRTLRQMVEYTFSLLHDDVQAACLRLALFEHHFSLAQATQAFKVNWRVASGLVDASCLEGSVDSRGETRFSM PIVIRLYARQVALERDVYHQLMLEFTQYWANEIKQILQRWEQTIERAKDHGELLTPMNDLSLLRESYTTIRGCLQWAAIY EHTQLLELVGGLWKFWLHYESPEGRLWLRSAMSMASDQQRSELQQILLLFS
Sequences:
>Translated_531_residues MPHPWPNKMLRQLLRGEMLSQTLQQWVDNHGGRQVVVQTLRDGMSHDVDALAFFEQQVNRYTTESQKAANLNMADSTYYA KRGRFYEQLRHLLDHLPSLRPTTIIGLPIPLTPLVGRQAVLQELLELCREYRLVTLHGIGGIGKTRLAIALASYIANAGF AQEVVFIDLRNEYTVHDSWHALLNRWLGDPKADLTSYIQQSNRRTVLIIDNCEHIRAVAEMLLPLLNFGNISIITTTQIA LSINGERRFPVPALSLEEGILLFEQRARDLNRQVERRQTEQIVQRLAGHPLAIEIAASQLLLVSLNDILAMTNVEMLEIE SLANGSASHRTLRQMVEYTFSLLHDDVQAACLRLALFEHHFSLAQATQAFKVNWRVASGLVDASCLEGSVDSRGETRFSM PIVIRLYARQVALERDVYHQLMLEFTQYWANEIKQILQRWEQTIERAKDHGELLTPMNDLSLLRESYTTIRGCLQWAAIY EHTQLLELVGGLWKFWLHYESPEGRLWLRSAMSMASDQQRSELQQILLLFS >Mature_530_residues PHPWPNKMLRQLLRGEMLSQTLQQWVDNHGGRQVVVQTLRDGMSHDVDALAFFEQQVNRYTTESQKAANLNMADSTYYAK RGRFYEQLRHLLDHLPSLRPTTIIGLPIPLTPLVGRQAVLQELLELCREYRLVTLHGIGGIGKTRLAIALASYIANAGFA QEVVFIDLRNEYTVHDSWHALLNRWLGDPKADLTSYIQQSNRRTVLIIDNCEHIRAVAEMLLPLLNFGNISIITTTQIAL SINGERRFPVPALSLEEGILLFEQRARDLNRQVERRQTEQIVQRLAGHPLAIEIAASQLLLVSLNDILAMTNVEMLEIES LANGSASHRTLRQMVEYTFSLLHDDVQAACLRLALFEHHFSLAQATQAFKVNWRVASGLVDASCLEGSVDSRGETRFSMP IVIRLYARQVALERDVYHQLMLEFTQYWANEIKQILQRWEQTIERAKDHGELLTPMNDLSLLRESYTTIRGCLQWAAIYE HTQLLELVGGLWKFWLHYESPEGRLWLRSAMSMASDQQRSELQQILLLFS
Specific function: Unknown
COG id: COG3903
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60896; Mature: 60765
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPWPNKMLRQLLRGEMLSQTLQQWVDNHGGRQVVVQTLRDGMSHDVDALAFFEQQVNR CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH YTTESQKAANLNMADSTYYAKRGRFYEQLRHLLDHLPSLRPTTIIGLPIPLTPLVGRQAV HHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHH LQELLELCREYRLVTLHGIGGIGKTRLAIALASYIANAGFAQEVVFIDLRNEYTVHDSWH HHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECHHHH ALLNRWLGDPKADLTSYIQQSNRRTVLIIDNCEHIRAVAEMLLPLLNFGNISIITTTQIA HHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEE LSINGERRFPVPALSLEEGILLFEQRARDLNRQVERRQTEQIVQRLAGHPLAIEIAASQL EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH LLVSLNDILAMTNVEMLEIESLANGSASHRTLRQMVEYTFSLLHDDVQAACLRLALFEHH HHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSLAQATQAFKVNWRVASGLVDASCLEGSVDSRGETRFSMPIVIRLYARQVALERDVYHQ HHHHHHHHHHEEEEEHHCCCHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHH LMLEFTQYWANEIKQILQRWEQTIERAKDHGELLTPMNDLSLLRESYTTIRGCLQWAAIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EHTQLLELVGGLWKFWLHYESPEGRLWLRSAMSMASDQQRSELQQILLLFS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PHPWPNKMLRQLLRGEMLSQTLQQWVDNHGGRQVVVQTLRDGMSHDVDALAFFEQQVNR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH YTTESQKAANLNMADSTYYAKRGRFYEQLRHLLDHLPSLRPTTIIGLPIPLTPLVGRQAV HHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHH LQELLELCREYRLVTLHGIGGIGKTRLAIALASYIANAGFAQEVVFIDLRNEYTVHDSWH HHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECHHHH ALLNRWLGDPKADLTSYIQQSNRRTVLIIDNCEHIRAVAEMLLPLLNFGNISIITTTQIA HHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEE LSINGERRFPVPALSLEEGILLFEQRARDLNRQVERRQTEQIVQRLAGHPLAIEIAASQL EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH LLVSLNDILAMTNVEMLEIESLANGSASHRTLRQMVEYTFSLLHDDVQAACLRLALFEHH HHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSLAQATQAFKVNWRVASGLVDASCLEGSVDSRGETRFSMPIVIRLYARQVALERDVYHQ HHHHHHHHHHEEEEEHHCCCHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHH LMLEFTQYWANEIKQILQRWEQTIERAKDHGELLTPMNDLSLLRESYTTIRGCLQWAAIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EHTQLLELVGGLWKFWLHYESPEGRLWLRSAMSMASDQQRSELQQILLLFS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]