| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899560
Identifier: 159899560
GI number: 159899560
Start: 3841320
End: 3842819
Strand: Reverse
Name: 159899560
Synonym: Haur_3041
Alternate gene names: NA
Gene position: 3842819-3841320 (Counterclockwise)
Preceding gene: 159899561
Following gene: 159899545
Centisome position: 60.55
GC content: 54.67
Gene sequence:
>1500_bases ATGGGCTTTTGTTGGCTTGTGGAAGAATTGAAACCGATGGAAAAACAGCAGACTGAAGGGCAAAAACAGGCGTGGTGGCG GCTTGGTTTGGGCGGATTCTTGTTGGTGATGATGCTGGGCTTGATGTGGCCAGCTTTTGAACGAGGCTTGGCGCGGCGGC CTGTGCTGAACTTGCAAACCCCCGACGATGGGCTTGAAGGCACCTTATTGCACGAATCCCAACTGATTCGGCGTGATCGC TCGTTGTATCGCCCCATTGTAGCCGAAGAATTTATTTCGGCTCCCTATACCCCTTTGCACCCGATGCTGCTTTCGTTTAT GCCGTTTGACCCTGAGCGGCCTTTTACGGCAGGCCGTTGGATTTCGCTGCTCTCAATGCTGGCGATTGGCCTGATTATCA GCCTGTTTGTGGCTAGCCATACCCGTATTTGGTTGCTCGGTTTAGCGGTTGGGGCGTGTTGGCTGGCCTTTCCACCAGCC CAATTATGGGCCTTGCGACTCAAGCCAGATCTGTTTGCCTTGAGCTTTACGGCGCTGGGTTTGCTGTTGGCTAGTTGGCG TGAAGGGCGTTGGTTTGGTTGGGCGGCAGTGTGTTTTGGCTTGGCATTTTTAGCCAAACAAACCTTGGCGATGGCTCCGC TGGCGGTTGGGCTTAATTTGCTGCTGCACGATTGGCGCAAAGGCCTGAAATTTGGCACGCTTGCCGTTTTGGCGGCAGGC TTGCCCTATCTCGCGTTGGATCTTGTGACCGCTGGCTGGGCGACGCGCCACATTTGGGGCTTGCATCGCTCGGAGTGGTG GAGCTTTGATCTGATGTGGAAATATGTGCGATTGCTTGGCTGGTCGTTGCCTTTGGTTGGCTTGGCGCTGCTGGGCTTGG GCTTGTACTGGCGACATTATGCCATGCGCCAAGCGGCCTTGTATGCCACGCTGGCTCCAATTTCGTTGTATGGAGCGGGC GAAGTTGGGGCGCACCATAATCATCTTTTAGAAACAATGCTAGCGTGGTGCTTGGCTGGTGGCTTGGCGGCTGGTTTGCT GATTAACCTTGGTTTGAGTAAGCAAGGTTGGCGGCGGGCAGCGACGGCGCTGGCGATCGGTGGCTTGTTGCTGCAAGGCT GGTGTTTACGCCAAACCCCCAGTTGGTATGGGGGCGAGTTTGGCATTCTCGATTTGGCGCGATTTGTACCCTATATTCAA TCTAAGCCCGGCGATGTATTGCTCGATAACCCGGGCTTGGCGATTGCGGCGGGCAAACCCTTGATTTTCGATGATCCTTC GACGATGGGGCCAGCGATTGAGAGTGGCGTTTGGCCAGCTCATGGCTTCTATGAAAGCATTCGGCAACGCCGTTGGAGCT TGATTATGCTGCCGTTTAACGTGCAAACTGATCGGCGCGATGCGACGGGACGCTGGACTGAAGAGAGCATTCGCCTGATT GACGAGCATTATCAACTAGAATTTGCCGATATCGTGTTTACCTACGTGCCAAAGCCCTAA
Upstream 100 bases:
>100_bases TTGCAAACTGAAACCGAGCCAAGCGTGCGTAACGAATTGCAACAGAGTTTGCACGAGCGCTCAGCTTGCTAGACGTTAGT TGGCGGATCTGCTATCATCC
Downstream 100 bases:
>100_bases AACGCAATTGCCACCATCCCCTCCGAGACGGTGGCAATTCTTTTTTTCAAACAATACACTCTAACCAAAGGACCCGTGGA TACGGTTCGACAGCTTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MGFCWLVEELKPMEKQQTEGQKQAWWRLGLGGFLLVMMLGLMWPAFERGLARRPVLNLQTPDDGLEGTLLHESQLIRRDR SLYRPIVAEEFISAPYTPLHPMLLSFMPFDPERPFTAGRWISLLSMLAIGLIISLFVASHTRIWLLGLAVGACWLAFPPA QLWALRLKPDLFALSFTALGLLLASWREGRWFGWAAVCFGLAFLAKQTLAMAPLAVGLNLLLHDWRKGLKFGTLAVLAAG LPYLALDLVTAGWATRHIWGLHRSEWWSFDLMWKYVRLLGWSLPLVGLALLGLGLYWRHYAMRQAALYATLAPISLYGAG EVGAHHNHLLETMLAWCLAGGLAAGLLINLGLSKQGWRRAATALAIGGLLLQGWCLRQTPSWYGGEFGILDLARFVPYIQ SKPGDVLLDNPGLAIAAGKPLIFDDPSTMGPAIESGVWPAHGFYESIRQRRWSLIMLPFNVQTDRRDATGRWTEESIRLI DEHYQLEFADIVFTYVPKP
Sequences:
>Translated_499_residues MGFCWLVEELKPMEKQQTEGQKQAWWRLGLGGFLLVMMLGLMWPAFERGLARRPVLNLQTPDDGLEGTLLHESQLIRRDR SLYRPIVAEEFISAPYTPLHPMLLSFMPFDPERPFTAGRWISLLSMLAIGLIISLFVASHTRIWLLGLAVGACWLAFPPA QLWALRLKPDLFALSFTALGLLLASWREGRWFGWAAVCFGLAFLAKQTLAMAPLAVGLNLLLHDWRKGLKFGTLAVLAAG LPYLALDLVTAGWATRHIWGLHRSEWWSFDLMWKYVRLLGWSLPLVGLALLGLGLYWRHYAMRQAALYATLAPISLYGAG EVGAHHNHLLETMLAWCLAGGLAAGLLINLGLSKQGWRRAATALAIGGLLLQGWCLRQTPSWYGGEFGILDLARFVPYIQ SKPGDVLLDNPGLAIAAGKPLIFDDPSTMGPAIESGVWPAHGFYESIRQRRWSLIMLPFNVQTDRRDATGRWTEESIRLI DEHYQLEFADIVFTYVPKP >Mature_498_residues GFCWLVEELKPMEKQQTEGQKQAWWRLGLGGFLLVMMLGLMWPAFERGLARRPVLNLQTPDDGLEGTLLHESQLIRRDRS LYRPIVAEEFISAPYTPLHPMLLSFMPFDPERPFTAGRWISLLSMLAIGLIISLFVASHTRIWLLGLAVGACWLAFPPAQ LWALRLKPDLFALSFTALGLLLASWREGRWFGWAAVCFGLAFLAKQTLAMAPLAVGLNLLLHDWRKGLKFGTLAVLAAGL PYLALDLVTAGWATRHIWGLHRSEWWSFDLMWKYVRLLGWSLPLVGLALLGLGLYWRHYAMRQAALYATLAPISLYGAGE VGAHHNHLLETMLAWCLAGGLAAGLLINLGLSKQGWRRAATALAIGGLLLQGWCLRQTPSWYGGEFGILDLARFVPYIQS KPGDVLLDNPGLAIAAGKPLIFDDPSTMGPAIESGVWPAHGFYESIRQRRWSLIMLPFNVQTDRRDATGRWTEESIRLID EHYQLEFADIVFTYVPKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55964; Mature: 55833
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFCWLVEELKPMEKQQTEGQKQAWWRLGLGGFLLVMMLGLMWPAFERGLARRPVLNLQT CCHHHHHHHHCCHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC PDDGLEGTLLHESQLIRRDRSLYRPIVAEEFISAPYTPLHPMLLSFMPFDPERPFTAGRW CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHH ISLLSMLAIGLIISLFVASHTRIWLLGLAVGACWLAFPPAQLWALRLKPDLFALSFTALG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHEEEEECCCHHHHHHHHHH LLLASWREGRWFGWAAVCFGLAFLAKQTLAMAPLAVGLNLLLHDWRKGLKFGTLAVLAAG HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC LPYLALDLVTAGWATRHIWGLHRSEWWSFDLMWKYVRLLGWSLPLVGLALLGLGLYWRHY CHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AMRQAALYATLAPISLYGAGEVGAHHNHLLETMLAWCLAGGLAAGLLINLGLSKQGWRRA HHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ATALAIGGLLLQGWCLRQTPSWYGGEFGILDLARFVPYIQSKPGDVLLDNPGLAIAAGKP HHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCC LIFDDPSTMGPAIESGVWPAHGFYESIRQRRWSLIMLPFNVQTDRRDATGRWTEESIRLI EEECCCCCCCCHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH DEHYQLEFADIVFTYVPKP HHHHHEEEEHEEEEECCCC >Mature Secondary Structure GFCWLVEELKPMEKQQTEGQKQAWWRLGLGGFLLVMMLGLMWPAFERGLARRPVLNLQT CHHHHHHHHCCHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC PDDGLEGTLLHESQLIRRDRSLYRPIVAEEFISAPYTPLHPMLLSFMPFDPERPFTAGRW CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHH ISLLSMLAIGLIISLFVASHTRIWLLGLAVGACWLAFPPAQLWALRLKPDLFALSFTALG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHEEEEECCCHHHHHHHHHH LLLASWREGRWFGWAAVCFGLAFLAKQTLAMAPLAVGLNLLLHDWRKGLKFGTLAVLAAG HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC LPYLALDLVTAGWATRHIWGLHRSEWWSFDLMWKYVRLLGWSLPLVGLALLGLGLYWRHY CHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AMRQAALYATLAPISLYGAGEVGAHHNHLLETMLAWCLAGGLAAGLLINLGLSKQGWRRA HHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ATALAIGGLLLQGWCLRQTPSWYGGEFGILDLARFVPYIQSKPGDVLLDNPGLAIAAGKP HHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCC LIFDDPSTMGPAIESGVWPAHGFYESIRQRRWSLIMLPFNVQTDRRDATGRWTEESIRLI EEECCCCCCCCHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH DEHYQLEFADIVFTYVPKP HHHHHEEEEHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA