| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is braE [H]
Identifier: 159899523
GI number: 159899523
Start: 3792895
End: 3794646
Strand: Reverse
Name: braE [H]
Synonym: Haur_3004
Alternate gene names: 159899523
Gene position: 3794646-3792895 (Counterclockwise)
Preceding gene: 159899524
Following gene: 159899522
Centisome position: 59.79
GC content: 52.0
Gene sequence:
>1752_bases ATGCCAAATACAAAGCGCTATTTGATAACTGGTGGAATTGGCTTTGCAGTTGGGACATTCTTTTTATGGAATTACCCGAA TCTTGCGCTTGGCTCGGCAATAATTGGTGGTCTGGTCATTGCCGCGCTCTGTTTGCTCTATAGTGCGCCCTTACCCGATA TGGTTAAAGGTGGCTTAATTGCTGGTTTGTTCGGCGCAGTCATGACAATTGTCTATGGCCCCGATAAGCCAGGGGTGGCG ATTATTGCGGGCATGCTCAGTGGTTTGGGCGCTGGTTTGCTGGCATTTCAACGCAAACCACAAGCAACGCCCCAAGCTGG GGCTGCTTTGGGCGCTGGGGCTGGCGCAATTGCTGGCGCTTGGACGGCCCTCGCCCTCTTTTTAACTGCCTTTGTGATCG CTCCCGCCGCTGGGGTTGATGCTAGCGAGTTTGCCGAGCATTTATCCGAAACCGTGATTTTGGCTGATGCGATGGGCTTA GCCAGCGATATTCTGATTTTGCTGTTTGTGTTGGTGTTTTGTACCATCACTGGCGCATTATTGGGGGCGGCAGCGGGTGC AGCACGGGCTTTGCCGTTGCGGCCTAATATCCCACTGTTAGCGGTGATTGCCCTGCCAGTGATCTTGATTCCCTTGATTG ATCGTGCTGGCAACTTGCTCTTGCTTGATGCCTTGATTCCGATTTATATCTTTATTCTCCTGGCCTTAGGCTTGAACATT GTGGTGGGTTATGCGGGCTTGCTTGATTTAGGTTATGCAGCCTTCTTTGCAATTGGTGCTTACACCACCGCCATGCTCTC ATCGCCGCACCTTGGCATCAACATTAGTTTTTGGTTGGTAATTTGGGTGGCGGCGGCGGTCGCGGCAATTGCTGGTTTAG CCTTGGGTGCGCCCACGCTACCCTTACGAGGCGACTATTTGGCGATTGTGACCCTTGGTTTCGGCGAAATTGTGCCGATT CTCTTCCGCAACCTTGGTGGTGGCCCACCCACAGGAACCTTGACCTTGCGCTTCTTCGGCCTGCCAATTGGGATTGAACA GATGGACTTGACTGGTGGTAATAAGGGGATTAACCCAATCTCGCCGCCAAATTTGCCGTTGATTGGCAATTTCGAGCCAT CGAACAAAATTCCTTGGTATTACCTGTTGATTATCATCATGGGCTTGGCGATTTTCTTCATCAACCGCCTGCGTGATTCA CGCCAAGGCCGCGCTTGGATGGCCATGCGCGAGGATGAATTGGCCGCTGATGCCATGGGTATCAACGTAGTACGCACCAA GTTGTTAGCCTTCTCGATGGGGGCAATGTTCTCAGGCTTTGGTGGTGCGTTCTATGGCGCATTCATCGGAGCGATTTTCC CAAGCTCATTCGACTTTAGCGTTTCAATCATCTTGCTCTGTATGGTGATTCTTGGTGGTTTGGGCAATATGGCCGGGGTG ATTGTCGGTGGCTTGCTAATTCAGGGCGCTGATAAGATGTTTATCCCCAAAGGTGCCGAATTGTTCCGCGATATTGCTGA CCAGAGAGCCCTCACCACCGGTGGTAGTACGGTCGGGGTTTCCGCTCTACAAGATTTGACCCAACAACGTTTATTGTTGT TTGGCATCGTGTTGGTGGTGATGATGCTGATTCGACCAGAAGGCCTGTTGCCCAACGAGCGCCGTAAAGCCGAATTACAT TCCGATGATGATCCGATCAATATCAATAGCGTGGCAGCCGAGGCGGATGCTGATCCGTCGTTGGCGGCGTAG
Upstream 100 bases:
>100_bases AATGCGGTGATTTTCGCCATTCTTGTCTTGATTTTGCTCTTCCGACCAACTGGTTTGCTCGGACAAGAAGGTGGCCAAAA AGCCTAGAAACGAGGATTGT
Downstream 100 bases:
>100_bases GAGACCTGCATGGCACCTTTGCTGCTAGCTCGCGGCATTACCAAGCGTTTTGGTGGCCTAACCGCCGTGAGCGATGTTTC ATTTGAGATTGAAAAAGGTT
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 582
Protein sequence:
>583_residues MPNTKRYLITGGIGFAVGTFFLWNYPNLALGSAIIGGLVIAALCLLYSAPLPDMVKGGLIAGLFGAVMTIVYGPDKPGVA IIAGMLSGLGAGLLAFQRKPQATPQAGAALGAGAGAIAGAWTALALFLTAFVIAPAAGVDASEFAEHLSETVILADAMGL ASDILILLFVLVFCTITGALLGAAAGAARALPLRPNIPLLAVIALPVILIPLIDRAGNLLLLDALIPIYIFILLALGLNI VVGYAGLLDLGYAAFFAIGAYTTAMLSSPHLGINISFWLVIWVAAAVAAIAGLALGAPTLPLRGDYLAIVTLGFGEIVPI LFRNLGGGPPTGTLTLRFFGLPIGIEQMDLTGGNKGINPISPPNLPLIGNFEPSNKIPWYYLLIIIMGLAIFFINRLRDS RQGRAWMAMREDELAADAMGINVVRTKLLAFSMGAMFSGFGGAFYGAFIGAIFPSSFDFSVSIILLCMVILGGLGNMAGV IVGGLLIQGADKMFIPKGAELFRDIADQRALTTGGSTVGVSALQDLTQQRLLLFGIVLVVMMLIRPEGLLPNERRKAELH SDDDPININSVAAEADADPSLAA
Sequences:
>Translated_583_residues MPNTKRYLITGGIGFAVGTFFLWNYPNLALGSAIIGGLVIAALCLLYSAPLPDMVKGGLIAGLFGAVMTIVYGPDKPGVA IIAGMLSGLGAGLLAFQRKPQATPQAGAALGAGAGAIAGAWTALALFLTAFVIAPAAGVDASEFAEHLSETVILADAMGL ASDILILLFVLVFCTITGALLGAAAGAARALPLRPNIPLLAVIALPVILIPLIDRAGNLLLLDALIPIYIFILLALGLNI VVGYAGLLDLGYAAFFAIGAYTTAMLSSPHLGINISFWLVIWVAAAVAAIAGLALGAPTLPLRGDYLAIVTLGFGEIVPI LFRNLGGGPPTGTLTLRFFGLPIGIEQMDLTGGNKGINPISPPNLPLIGNFEPSNKIPWYYLLIIIMGLAIFFINRLRDS RQGRAWMAMREDELAADAMGINVVRTKLLAFSMGAMFSGFGGAFYGAFIGAIFPSSFDFSVSIILLCMVILGGLGNMAGV IVGGLLIQGADKMFIPKGAELFRDIADQRALTTGGSTVGVSALQDLTQQRLLLFGIVLVVMMLIRPEGLLPNERRKAELH SDDDPININSVAAEADADPSLAA >Mature_582_residues PNTKRYLITGGIGFAVGTFFLWNYPNLALGSAIIGGLVIAALCLLYSAPLPDMVKGGLIAGLFGAVMTIVYGPDKPGVAI IAGMLSGLGAGLLAFQRKPQATPQAGAALGAGAGAIAGAWTALALFLTAFVIAPAAGVDASEFAEHLSETVILADAMGLA SDILILLFVLVFCTITGALLGAAAGAARALPLRPNIPLLAVIALPVILIPLIDRAGNLLLLDALIPIYIFILLALGLNIV VGYAGLLDLGYAAFFAIGAYTTAMLSSPHLGINISFWLVIWVAAAVAAIAGLALGAPTLPLRGDYLAIVTLGFGEIVPIL FRNLGGGPPTGTLTLRFFGLPIGIEQMDLTGGNKGINPISPPNLPLIGNFEPSNKIPWYYLLIIIMGLAIFFINRLRDSR QGRAWMAMREDELAADAMGINVVRTKLLAFSMGAMFSGFGGAFYGAFIGAIFPSSFDFSVSIILLCMVILGGLGNMAGVI VGGLLIQGADKMFIPKGAELFRDIADQRALTTGGSTVGVSALQDLTQQRLLLFGIVLVVMMLIRPEGLLPNERRKAELHS DDDPININSVAAEADADPSLAA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=352, Percent_Identity=36.0795454545455, Blast_Score=176, Evalue=3e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 60567; Mature: 60436
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00066 HMG_COA_REDUCTASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTKRYLITGGIGFAVGTFFLWNYPNLALGSAIIGGLVIAALCLLYSAPLPDMVKGGLI CCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AGLFGAVMTIVYGPDKPGVAIIAGMLSGLGAGLLAFQRKPQATPQAGAALGAGAGAIAGA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHH WTALALFLTAFVIAPAAGVDASEFAEHLSETVILADAMGLASDILILLFVLVFCTITGAL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAAAGAARALPLRPNIPLLAVIALPVILIPLIDRAGNLLLLDALIPIYIFILLALGLNI HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH VVGYAGLLDLGYAAFFAIGAYTTAMLSSPHLGINISFWLVIWVAAAVAAIAGLALGAPTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCC PLRGDYLAIVTLGFGEIVPILFRNLGGGPPTGTLTLRFFGLPIGIEQMDLTGGNKGINPI CCCCCEEEEEEECHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCC SPPNLPLIGNFEPSNKIPWYYLLIIIMGLAIFFINRLRDSRQGRAWMAMREDELAADAMG CCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHH INVVRTKLLAFSMGAMFSGFGGAFYGAFIGAIFPSSFDFSVSIILLCMVILGGLGNMAGV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHH IVGGLLIQGADKMFIPKGAELFRDIADQRALTTGGSTVGVSALQDLTQQRLLLFGIVLVV HHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MMLIRPEGLLPNERRKAELHSDDDPININSVAAEADADPSLAA HHHHCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure PNTKRYLITGGIGFAVGTFFLWNYPNLALGSAIIGGLVIAALCLLYSAPLPDMVKGGLI CCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AGLFGAVMTIVYGPDKPGVAIIAGMLSGLGAGLLAFQRKPQATPQAGAALGAGAGAIAGA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHH WTALALFLTAFVIAPAAGVDASEFAEHLSETVILADAMGLASDILILLFVLVFCTITGAL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAAAGAARALPLRPNIPLLAVIALPVILIPLIDRAGNLLLLDALIPIYIFILLALGLNI HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH VVGYAGLLDLGYAAFFAIGAYTTAMLSSPHLGINISFWLVIWVAAAVAAIAGLALGAPTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCC PLRGDYLAIVTLGFGEIVPILFRNLGGGPPTGTLTLRFFGLPIGIEQMDLTGGNKGINPI CCCCCEEEEEEECHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCC SPPNLPLIGNFEPSNKIPWYYLLIIIMGLAIFFINRLRDSRQGRAWMAMREDELAADAMG CCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHH INVVRTKLLAFSMGAMFSGFGGAFYGAFIGAIFPSSFDFSVSIILLCMVILGGLGNMAGV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHH IVGGLLIQGADKMFIPKGAELFRDIADQRALTTGGSTVGVSALQDLTQQRLLLFGIVLVV HHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MMLIRPEGLLPNERRKAELHSDDDPININSVAAEADADPSLAA HHHHCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]