| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899520
Identifier: 159899520
GI number: 159899520
Start: 3790774
End: 3791148
Strand: Reverse
Name: 159899520
Synonym: Haur_3001
Alternate gene names: NA
Gene position: 3791148-3790774 (Counterclockwise)
Preceding gene: 159899521
Following gene: 159899519
Centisome position: 59.74
GC content: 52.0
Gene sequence:
>375_bases ATGAGCGACCGAGTTTTTTTGGCGCATCTGCGCGATCAAGCCGAGTTTGTGGCTGGCGATGGTTGCCATTTGCGCGAACT CTTGCATCCAACTCAGCAGCCAATTCGCATTGGTTATAGCTTAGCCCATGCCTACGTTGATGTTGGTTGTCGCACTGCCG ATCACTGGCTTGAGCAATCTGAGGTATACTACATCATCGCTGGACATGGAACGATGGTGCTTGATGGTCAGGCCCATGCG ATCGAGGCTGGTTCGTATTACTATATTCCGCCACGTTGCTCACAATGGTTGCGCAATGATGGCGAACAACGCTTAGAGTT TTTATGTATCGTCGAGCCGCCTTGGACGGCGGCAGGCGAGACGATTACTGAGTAG
Upstream 100 bases:
>100_bases ATCGAGCCTATGTGCTGCAAACTGGGGCAATTGTTAAGGCAGGCGATGCCGCAACTTTGCGCGAAGATGAAGATGTACAA AAGGCCTACTTGGGGATGGA
Downstream 100 bases:
>100_bases CCTCGCTGATGAGTCTTTGGGCGCGGGTCTTCCCGCGCTTTTTTGTCGTCTCTGTTCCAACCAGCATTGAACTCTTTATT GACACACCAAGGTGGAACAC
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSDRVFLAHLRDQAEFVAGDGCHLRELLHPTQQPIRIGYSLAHAYVDVGCRTADHWLEQSEVYYIIAGHGTMVLDGQAHA IEAGSYYYIPPRCSQWLRNDGEQRLEFLCIVEPPWTAAGETITE
Sequences:
>Translated_124_residues MSDRVFLAHLRDQAEFVAGDGCHLRELLHPTQQPIRIGYSLAHAYVDVGCRTADHWLEQSEVYYIIAGHGTMVLDGQAHA IEAGSYYYIPPRCSQWLRNDGEQRLEFLCIVEPPWTAAGETITE >Mature_123_residues SDRVFLAHLRDQAEFVAGDGCHLRELLHPTQQPIRIGYSLAHAYVDVGCRTADHWLEQSEVYYIIAGHGTMVLDGQAHAI EAGSYYYIPPRCSQWLRNDGEQRLEFLCIVEPPWTAAGETITE
Specific function: Unknown
COG id: COG0662
COG function: function code G; Mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013096 - InterPro: IPR011051 - InterPro: IPR014710 [H]
Pfam domain/function: PF07883 Cupin_2 [H]
EC number: NA
Molecular weight: Translated: 14045; Mature: 13914
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRVFLAHLRDQAEFVAGDGCHLRELLHPTQQPIRIGYSLAHAYVDVGCRTADHWLEQS CCCCEEEEECCCCHHEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCC EVYYIIAGHGTMVLDGQAHAIEAGSYYYIPPRCSQWLRNDGEQRLEFLCIVEPPWTAAGE CEEEEEECCCEEEECCCCEEEECCCEEEECHHHHHHHHCCCCCEEEEEEEECCCCCCCCC TITE CCCC >Mature Secondary Structure SDRVFLAHLRDQAEFVAGDGCHLRELLHPTQQPIRIGYSLAHAYVDVGCRTADHWLEQS CCCEEEEECCCCHHEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCC EVYYIIAGHGTMVLDGQAHAIEAGSYYYIPPRCSQWLRNDGEQRLEFLCIVEPPWTAAGE CEEEEEECCCEEEECCCCEEEECCCEEEECHHHHHHHHCCCCCEEEEEEEECCCCCCCCC TITE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]