| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899471
Identifier: 159899471
GI number: 159899471
Start: 3725565
End: 3726650
Strand: Reverse
Name: 159899471
Synonym: Haur_2952
Alternate gene names: NA
Gene position: 3726650-3725565 (Counterclockwise)
Preceding gene: 159899472
Following gene: 159899470
Centisome position: 58.72
GC content: 48.53
Gene sequence:
>1086_bases ATGACCATCCTGCATTCGCTGGGCGATATTTCGTTGGCTTGGCTGACCGAACACTTACAGCCTTGGTTGGGTTCAGGCAT GATCAAGCATATGCAGCTGATCGAAGCCCATACGCCCAATTCGCAGCTTGGTCATATTCAATTACAATTGTTTCGCACGC CGATCAAAGCGCCGCGTCAATTGCTGCTTAAAATCAATCATGAACAGCATGGCGCTCATGAAGTGGCAATTTATCAGTAT GCGCAGGCCAACGATCTTAATCATTTGCCGTTTGTGCCGTGTTTTGCTGCTAGCTACGATCCTGTTTCAGGGGTTTCTAA CCTTTTATTGGCCGATTTAAGCGAAACCTATGAACCAGCCATTGATCGCCAATTATTAATCACTGGCGAACATGTTCCTA ATGAGCAGCGTCGTTTCATGTGCATCGATGGTTTAGCTCAACTGCATAGTTCGTGGTGGCAAGCACCCGTGATTGGCGAG GCTAATTCGCCGTTTGCAGTACACTGTTGGTATAACGATTCAGTGGCGCATGCTCAGCATGTGCAGCGTCGTCAAACCGA ATGGCAGCGATTTCTGGCTCAGCATGGCCCAATTCTCACCGATGCAATTCATGATCGTTTGGCTTCAACCTTGGCTGCCT TACCCACGCTTTGGCAACGTTGGCTTGAGCCACGCATCAGTAGCCATCGCCAATTAACCCTCGTGCATGGTGCTTGCGCC TTCAATCAATTTTTCTGCCCCAAAAATCCCCAAGAAGATCACGCTTACCTTTTGGATTTTAGTGCTGCTTCGGCCAATTT ACCAACCTACGATTTGGTTTCTCTGCTGGCAACGTTTTGGAATCCAACCCAACGCGCATTCTACGAGGAGCAACTGTTAC GGCGCTATTTGGCAGGCTTAATCGGCTCAGGCATCGATTACTCGTGGCAACAGCTTTGCAGCGATTATCGTTTGATGTTA GCTTACATGCTTTTTGAACCAATTGGAAATGCTATCGATGGCGCAGATCAGGCCTATTGGTGGCCCAAACTTCAAGGCCT CGCCGCTGCTAACGATGAATGGCATTGTGAGCAATTGTGGCGTTAA
Upstream 100 bases:
>100_bases CTGCAACAAGGAATTACCTATGCGATCAATGCGACCCGTGGGCAGCAAATGAATGTTAGGTATCGCGGAAATTGATCGAT AGGCGGCAAAGGGAGCGATC
Downstream 100 bases:
>100_bases ACGAGCATAGGGGGTTTATAACGTAAGGTTAGCGAAACAAGCACCTGTGAAAATAAGCCTTAGGTCATATGCACGGTTAG CATTTTTTGGGTAAACTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTILHSLGDISLAWLTEHLQPWLGSGMIKHMQLIEAHTPNSQLGHIQLQLFRTPIKAPRQLLLKINHEQHGAHEVAIYQY AQANDLNHLPFVPCFAASYDPVSGVSNLLLADLSETYEPAIDRQLLITGEHVPNEQRRFMCIDGLAQLHSSWWQAPVIGE ANSPFAVHCWYNDSVAHAQHVQRRQTEWQRFLAQHGPILTDAIHDRLASTLAALPTLWQRWLEPRISSHRQLTLVHGACA FNQFFCPKNPQEDHAYLLDFSAASANLPTYDLVSLLATFWNPTQRAFYEEQLLRRYLAGLIGSGIDYSWQQLCSDYRLML AYMLFEPIGNAIDGADQAYWWPKLQGLAAANDEWHCEQLWR
Sequences:
>Translated_361_residues MTILHSLGDISLAWLTEHLQPWLGSGMIKHMQLIEAHTPNSQLGHIQLQLFRTPIKAPRQLLLKINHEQHGAHEVAIYQY AQANDLNHLPFVPCFAASYDPVSGVSNLLLADLSETYEPAIDRQLLITGEHVPNEQRRFMCIDGLAQLHSSWWQAPVIGE ANSPFAVHCWYNDSVAHAQHVQRRQTEWQRFLAQHGPILTDAIHDRLASTLAALPTLWQRWLEPRISSHRQLTLVHGACA FNQFFCPKNPQEDHAYLLDFSAASANLPTYDLVSLLATFWNPTQRAFYEEQLLRRYLAGLIGSGIDYSWQQLCSDYRLML AYMLFEPIGNAIDGADQAYWWPKLQGLAAANDEWHCEQLWR >Mature_360_residues TILHSLGDISLAWLTEHLQPWLGSGMIKHMQLIEAHTPNSQLGHIQLQLFRTPIKAPRQLLLKINHEQHGAHEVAIYQYA QANDLNHLPFVPCFAASYDPVSGVSNLLLADLSETYEPAIDRQLLITGEHVPNEQRRFMCIDGLAQLHSSWWQAPVIGEA NSPFAVHCWYNDSVAHAQHVQRRQTEWQRFLAQHGPILTDAIHDRLASTLAALPTLWQRWLEPRISSHRQLTLVHGACAF NQFFCPKNPQEDHAYLLDFSAASANLPTYDLVSLLATFWNPTQRAFYEEQLLRRYLAGLIGSGIDYSWQQLCSDYRLMLA YMLFEPIGNAIDGADQAYWWPKLQGLAAANDEWHCEQLWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41315; Mature: 41184
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILHSLGDISLAWLTEHLQPWLGSGMIKHMQLIEAHTPNSQLGHIQLQLFRTPIKAPRQ CCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEHHCHHHHHHH LLLKINHEQHGAHEVAIYQYAQANDLNHLPFVPCFAASYDPVSGVSNLLLADLSETYEPA HHHHHCCCCCCCEEEEEEEEHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHH IDRQLLITGEHVPNEQRRFMCIDGLAQLHSSWWQAPVIGEANSPFAVHCWYNDSVAHAQH CCCEEEEECCCCCCHHHHEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHH VQRRQTEWQRFLAQHGPILTDAIHDRLASTLAALPTLWQRWLEPRISSHRQLTLVHGACA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH FNQFFCPKNPQEDHAYLLDFSAASANLPTYDLVSLLATFWNPTQRAFYEEQLLRRYLAGL HHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH IGSGIDYSWQQLCSDYRLMLAYMLFEPIGNAIDGADQAYWWPKLQGLAAANDEWHCEQLW HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHCCCCCCCCCHHHHHHC R C >Mature Secondary Structure TILHSLGDISLAWLTEHLQPWLGSGMIKHMQLIEAHTPNSQLGHIQLQLFRTPIKAPRQ CCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEHHCHHHHHHH LLLKINHEQHGAHEVAIYQYAQANDLNHLPFVPCFAASYDPVSGVSNLLLADLSETYEPA HHHHHCCCCCCCEEEEEEEEHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHH IDRQLLITGEHVPNEQRRFMCIDGLAQLHSSWWQAPVIGEANSPFAVHCWYNDSVAHAQH CCCEEEEECCCCCCHHHHEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHH VQRRQTEWQRFLAQHGPILTDAIHDRLASTLAALPTLWQRWLEPRISSHRQLTLVHGACA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHH FNQFFCPKNPQEDHAYLLDFSAASANLPTYDLVSLLATFWNPTQRAFYEEQLLRRYLAGL HHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH IGSGIDYSWQQLCSDYRLMLAYMLFEPIGNAIDGADQAYWWPKLQGLAAANDEWHCEQLW HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHCCCCCCCCCHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA