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The map label for this gene is ycaQ [H]

Identifier: 159899469

GI number: 159899469

Start: 3723119

End: 3724324

Strand: Reverse

Name: ycaQ [H]

Synonym: Haur_2950

Alternate gene names: 159899469

Gene position: 3724324-3723119 (Counterclockwise)

Preceding gene: 159899470

Following gene: 159899468

Centisome position: 58.68

GC content: 53.65

Gene sequence:

>1206_bases
ATGACTCGGACTATCTCGCTTGATCAAGCGCGGGCGATTGCAATTGCTGCCCAAGGCTTAGATCGTCGTCCCAACACTGT
TGATCAAACCACATTGCAACAAACCATCCAGCGCATGCAAATTGTCCAGATCGATACGATCAATGTGGTAGCACGTGCGC
CCTACTTTGTGCTCTGGAGCCGTTTGGGTGATTATGATCCTGCTTGGTTTGAGCAATTGCAATATCCGGCGGGTCAATTA
TTTGAATATTGGGCACATGCAGCCTCGTTCTTGCCGATCGAATTATTTCCCTTGCTGCGTCCAGCGATGTTGCGCTATAT
CCACGATTGGCACAGGTCGCGGCGTTGGCTCGAGGAAAATAAGGCGGTGGCTGATGGTGTGCTGGCCATGATTCGCGAAC
GTGGCCCGTTGCGTTCAGCCGATTTTGAAGCCCCAGCCGATCATGCTGGCGGTGGCTGGTGGAATTGGAAACCAGCCAAA
TCGGCGCTCGATATCCTCTGGGGCATGGGCGAATTGATGATTGTGCGCCGCGAGAAATTCCAACGGGTTTATGAATTGAC
CGAGCGGGTTGTGCCCGATTGGGATGATCGCGATGTGCTTAGTTTTGAGGCAGCCGCCGAGCAATTGAGTGAGCGTGGCT
TGCGGGCGATGGGGATTGCCACCGAGCGGCATCTGCCCGATTACTTTCGCCAACGCCGACCAGGCATCAAAGAACGCTTG
CAAACTTGGGCGGCTGAAGGCAAGGCAATTGAGGTGCATGTGGAAGGTTGGAAAACTCCAGCCTATATTCATCATGACCA
GCGCCATTTGTTGGAGCAAACACCCACGCCCAGTCTGACGACGATGCTTTCGCCCTTCGATAACTTAATTTGGGATCGCC
AACGCACGCTGGATTTTTGGCAGTTTGACTATCGGCTTGAATGCTATACCCCAGCGCCCAAGCGACGCTATGGCTATTTC
ACCTTGCCAATTCTCTGGAAAGATCGAGTAGTTGGGCGGATTGATGCCAAGGCTGAGCGCAGTGCTGGGATTTTTCGGGT
GCATGCCCTGCATTTGGAACCAAACATCGAGCTAAGCGAAGCTTTATACGACGATCTGGCCGTGATGCTGCGTGATTGTG
CCAATTGGCATCGCACGCCAACCATCAGCATTACAATGAGCGATCCGCCGCAGGTGGCTGACGAAGTGCAAGCCCGCGTG
AGCTAG

Upstream 100 bases:

>100_bases
TTTTGTGATTGATCTTGCCAGCCTGTCAGCCAATTAATCTGCTGTGGCAACTCAACATGTGGCCTCGTTGTGTCGGTTGA
GTTTGAATTAAGGATGATGT

Downstream 100 bases:

>100_bases
GATTATGCAGCTAATCCAACTACGGCCAATTTTGGTTGAGCAACAAGCCCAATTAGCCGCGCTAATCGCTGATTATCTAG
CTGAGCTTGATCCGACAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MTRTISLDQARAIAIAAQGLDRRPNTVDQTTLQQTIQRMQIVQIDTINVVARAPYFVLWSRLGDYDPAWFEQLQYPAGQL
FEYWAHAASFLPIELFPLLRPAMLRYIHDWHRSRRWLEENKAVADGVLAMIRERGPLRSADFEAPADHAGGGWWNWKPAK
SALDILWGMGELMIVRREKFQRVYELTERVVPDWDDRDVLSFEAAAEQLSERGLRAMGIATERHLPDYFRQRRPGIKERL
QTWAAEGKAIEVHVEGWKTPAYIHHDQRHLLEQTPTPSLTTMLSPFDNLIWDRQRTLDFWQFDYRLECYTPAPKRRYGYF
TLPILWKDRVVGRIDAKAERSAGIFRVHALHLEPNIELSEALYDDLAVMLRDCANWHRTPTISITMSDPPQVADEVQARV
S

Sequences:

>Translated_401_residues
MTRTISLDQARAIAIAAQGLDRRPNTVDQTTLQQTIQRMQIVQIDTINVVARAPYFVLWSRLGDYDPAWFEQLQYPAGQL
FEYWAHAASFLPIELFPLLRPAMLRYIHDWHRSRRWLEENKAVADGVLAMIRERGPLRSADFEAPADHAGGGWWNWKPAK
SALDILWGMGELMIVRREKFQRVYELTERVVPDWDDRDVLSFEAAAEQLSERGLRAMGIATERHLPDYFRQRRPGIKERL
QTWAAEGKAIEVHVEGWKTPAYIHHDQRHLLEQTPTPSLTTMLSPFDNLIWDRQRTLDFWQFDYRLECYTPAPKRRYGYF
TLPILWKDRVVGRIDAKAERSAGIFRVHALHLEPNIELSEALYDDLAVMLRDCANWHRTPTISITMSDPPQVADEVQARV
S
>Mature_400_residues
TRTISLDQARAIAIAAQGLDRRPNTVDQTTLQQTIQRMQIVQIDTINVVARAPYFVLWSRLGDYDPAWFEQLQYPAGQLF
EYWAHAASFLPIELFPLLRPAMLRYIHDWHRSRRWLEENKAVADGVLAMIRERGPLRSADFEAPADHAGGGWWNWKPAKS
ALDILWGMGELMIVRREKFQRVYELTERVVPDWDDRDVLSFEAAAEQLSERGLRAMGIATERHLPDYFRQRRPGIKERLQ
TWAAEGKAIEVHVEGWKTPAYIHHDQRHLLEQTPTPSLTTMLSPFDNLIWDRQRTLDFWQFDYRLECYTPAPKRRYGYFT
LPILWKDRVVGRIDAKAERSAGIFRVHALHLEPNIELSEALYDDLAVMLRDCANWHRTPTISITMSDPPQVADEVQARVS

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=394, Percent_Identity=42.3857868020305, Blast_Score=290, Evalue=8e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 46741; Mature: 46610

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTISLDQARAIAIAAQGLDRRPNTVDQTTLQQTIQRMQIVQIDTINVVARAPYFVLWS
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEEHHHHHCHHHHHHH
RLGDYDPAWFEQLQYPAGQLFEYWAHAASFLPIELFPLLRPAMLRYIHDWHRSRRWLEEN
HHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAVADGVLAMIRERGPLRSADFEAPADHAGGGWWNWKPAKSALDILWGMGELMIVRREKF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH
QRVYELTERVVPDWDDRDVLSFEAAAEQLSERGLRAMGIATERHLPDYFRQRRPGIKERL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCHHHCCHHHHHHHCCCHHHHH
QTWAAEGKAIEVHVEGWKTPAYIHHDQRHLLEQTPTPSLTTMLSPFDNLIWDRQRTLDFW
HHHHCCCCEEEEEEECCCCCCEEECHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHCCCEE
QFDYRLECYTPAPKRRYGYFTLPILWKDRVVGRIDAKAERSAGIFRVHALHLEPNIELSE
EEEEEEEEECCCCCCCCCEEEEEEEECCCHHHHCCCCHHHCCCEEEEEEEEECCCCCHHH
ALYDDLAVMLRDCANWHRTPTISITMSDPPQVADEVQARVS
HHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure 
TRTISLDQARAIAIAAQGLDRRPNTVDQTTLQQTIQRMQIVQIDTINVVARAPYFVLWS
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEEHHHHHCHHHHHHH
RLGDYDPAWFEQLQYPAGQLFEYWAHAASFLPIELFPLLRPAMLRYIHDWHRSRRWLEEN
HHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAVADGVLAMIRERGPLRSADFEAPADHAGGGWWNWKPAKSALDILWGMGELMIVRREKF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH
QRVYELTERVVPDWDDRDVLSFEAAAEQLSERGLRAMGIATERHLPDYFRQRRPGIKERL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCHHHCCHHHHHHHCCCHHHHH
QTWAAEGKAIEVHVEGWKTPAYIHHDQRHLLEQTPTPSLTTMLSPFDNLIWDRQRTLDFW
HHHHCCCCEEEEEEECCCCCCEEECHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHCCCEE
QFDYRLECYTPAPKRRYGYFTLPILWKDRVVGRIDAKAERSAGIFRVHALHLEPNIELSE
EEEEEEEEECCCCCCCCCEEEEEEEECCCHHHHCCCCHHHCCCEEEEEEEEECCCCCHHH
ALYDDLAVMLRDCANWHRTPTISITMSDPPQVADEVQARVS
HHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]