| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899451
Identifier: 159899451
GI number: 159899451
Start: 3707374
End: 3708408
Strand: Reverse
Name: 159899451
Synonym: Haur_2932
Alternate gene names: NA
Gene position: 3708408-3707374 (Counterclockwise)
Preceding gene: 159899453
Following gene: 159899448
Centisome position: 58.43
GC content: 48.31
Gene sequence:
>1035_bases ATGGTTAAGCTTCTGTCTCGCCGAGGAGTTAGGATGCGCCGGTTAAGCTATCTCAGTGTGCTCATGCTGGTGTTACTGGC TGCTTGTAGTACGAGCCAAGCAACCCCCACCCCAGCCCCTAAGGATTCGGTCAAGCTTCAGTTGAACTGGGTTTTTGATT ATTCGTCGTCGGGCTTTTTTGCTGCTGAAAAGAATGGTCGTTTTGGCGAGCAGAATTTGAATGTCGAGTTGATTGCAGGC GGTTTTGATGCTAACGGCTATATTGATGGTACTGAAAAAGTCAGTAGTGGGGCCGCTGATTTTGGGGTAGCCAGCGCCGA TAGTGTGATTCAAGCTCGTGCTAATGGCAAACCTGTGGTTGGGATTGCCGTGCTAACCCAAAATAGCCCATTAGCGATTC TTTCCTTGCCTGGCGCTAATATTCGCACGCCCCAAGATTTGGTTGGCAAGAAAGTGCTGGTCTCGGAAGGCGGGGCAACC CAGCTTTACAATACCTTGCTGACCGCCCAAGGCATCGATTTGGAGAGCGCCAAGCCCTTACCACGCTTCGATTCAGGTAT CGATCAGTTAATTGATGGCGAAATTGATGCGTTGGTGGCTTGGAATATCAACGAAGCAATTGAATTAAGCGAGCGGGGCT ATCCACCCTCAATTATGTTGATGAGCGATTACGGCATCAATAGCTATGAGTTGGTGATTATTACTACCGAAAAAATGGCA ACTGAAAATCCCGATTTGGTCACCCGTTTCCTCAAAGCTACCTTCAAAGGTTGGAATGACGTAATTGCTAATCCAAGCCA AGCGGTTGATTATGTTGTGACCTACGATGTTAAGCTCAATCGCGATGCCCAACTACGGCGCTTAACTGAAATGCTGAAGT TGATCAAGCCTGCGAACACCAAAATTGGCGATATGCGACCCGATCTTTGGTCGTTTACCCACCAAATGTTGCAAACCCAG GGCGCACTCAAAGAGCCAATTGAGTTGGGTCGGGCCTATTCAACCTTGTTCTTAGATGTTATTCCTGACCGCTAG
Upstream 100 bases:
>100_bases AGACCTTGACAAGGACTTTAGTCGATCTAATAATGACATTTACACAGCCCGTATCTAGATTATATTGCGCTTAGTGCTTT TTTGTTCATGGAGGTTGCCC
Downstream 100 bases:
>100_bases ACCCGCATCGAACCAAACCCCCCGATCCATACCAAATGGATCGGGGGTTTATTATGTGGTTCGTTAAGTTCTAGGCTTGA TTTAATGTTGCTCGGACAGC
Product: NMT1/THI5-like domain-containing protein
Products: NA
Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Diguanylate Cyclase; Twin-Arginine Translocation Pathway Signal; Histidine Kinase; NMT1/THI5 Like Domain-Containing Protein; NMT1/THI5-Like Protein; NMT1/THI5 Like Family; Membrane Lipoprotein Lipid Attachment Site; GGDEF Domain-Containing Protein; ABC Transporter Periplasmic; Secreted Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; PAS Sensor Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Diguanylate Cyclase With Extracellular Sensor; PAS/PAC Sensor-Containg Diguanylate Cyclase; ABC Transporter Periplasmic Components; NMT1/THI5-Like Family; Diguanylate Cyclase/Phosphodiesterase; Sulfonate/Nitrate Transport System; ThiY Protein; Diguanylate Cyclase With PAS/PAC Sensor; ABC Transporter Permease; PAS/GGDEF Domain-Containing Protein; Signal Peptide; Signal Transduction Response Regulator; Two-Component Sensor Histidine Kinase; ABC Transporter; Sensory Box Histidine Kinase; PasGgdef; Two-Component Sensor Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Two Domain Sensory Box Histidine Kinase; Signal Transduction Protein; Diguanylate Cyclase Domain Protein; Sensory Transduction Histidine Kinase; Pyrimidine Biosynthesis; NMT1/THI5-Ike Domain-Containing Protein; NMT1/THI5 Family Protein; ABC Transporter Periplasmic Protein; Permease Protein Of ABC Transporter; ABC-Type Transporter Periplasmic Component; Thiamine Biosynthesis; Lipoprotein; PAS/PAC Sensor-Containing Diguanylate Cyclase; Exported Protein; NMT1/THI5 Like Protein; Multi-Sensor Signal Transduction Histidine Kinase
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MVKLLSRRGVRMRRLSYLSVLMLVLLAACSTSQATPTPAPKDSVKLQLNWVFDYSSSGFFAAEKNGRFGEQNLNVELIAG GFDANGYIDGTEKVSSGAADFGVASADSVIQARANGKPVVGIAVLTQNSPLAILSLPGANIRTPQDLVGKKVLVSEGGAT QLYNTLLTAQGIDLESAKPLPRFDSGIDQLIDGEIDALVAWNINEAIELSERGYPPSIMLMSDYGINSYELVIITTEKMA TENPDLVTRFLKATFKGWNDVIANPSQAVDYVVTYDVKLNRDAQLRRLTEMLKLIKPANTKIGDMRPDLWSFTHQMLQTQ GALKEPIELGRAYSTLFLDVIPDR
Sequences:
>Translated_344_residues MVKLLSRRGVRMRRLSYLSVLMLVLLAACSTSQATPTPAPKDSVKLQLNWVFDYSSSGFFAAEKNGRFGEQNLNVELIAG GFDANGYIDGTEKVSSGAADFGVASADSVIQARANGKPVVGIAVLTQNSPLAILSLPGANIRTPQDLVGKKVLVSEGGAT QLYNTLLTAQGIDLESAKPLPRFDSGIDQLIDGEIDALVAWNINEAIELSERGYPPSIMLMSDYGINSYELVIITTEKMA TENPDLVTRFLKATFKGWNDVIANPSQAVDYVVTYDVKLNRDAQLRRLTEMLKLIKPANTKIGDMRPDLWSFTHQMLQTQ GALKEPIELGRAYSTLFLDVIPDR >Mature_344_residues MVKLLSRRGVRMRRLSYLSVLMLVLLAACSTSQATPTPAPKDSVKLQLNWVFDYSSSGFFAAEKNGRFGEQNLNVELIAG GFDANGYIDGTEKVSSGAADFGVASADSVIQARANGKPVVGIAVLTQNSPLAILSLPGANIRTPQDLVGKKVLVSEGGAT QLYNTLLTAQGIDLESAKPLPRFDSGIDQLIDGEIDALVAWNINEAIELSERGYPPSIMLMSDYGINSYELVIITTEKMA TENPDLVTRFLKATFKGWNDVIANPSQAVDYVVTYDVKLNRDAQLRRLTEMLKLIKPANTKIGDMRPDLWSFTHQMLQTQ GALKEPIELGRAYSTLFLDVIPDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6319957, Length=259, Percent_Identity=27.4131274131274, Blast_Score=79, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6323997, Length=259, Percent_Identity=27.4131274131274, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321050, Length=259, Percent_Identity=27.4131274131274, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322616, Length=259, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37575; Mature: 37575
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKLLSRRGVRMRRLSYLSVLMLVLLAACSTSQATPTPAPKDSVKLQLNWVFDYSSSGFF CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEE AAEKNGRFGEQNLNVELIAGGFDANGYIDGTEKVSSGAADFGVASADSVIQARANGKPVV EECCCCCCCCCCCCEEEEEECCCCCCEECCHHHHCCCCCCCCCCCCCHHHHHCCCCCCEE GIAVLTQNSPLAILSLPGANIRTPQDLVGKKVLVSEGGATQLYNTLLTAQGIDLESAKPL EEEEEECCCCEEEEECCCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC PRFDSGIDQLIDGEIDALVAWNINEAIELSERGYPPSIMLMSDYGINSYELVIITTEKMA CCHHHHHHHHHCCCEEEEEEECCCHHHHHHCCCCCCEEEEEECCCCCEEEEEEEEEHHHC TENPDLVTRFLKATFKGWNDVIANPSQAVDYVVTYDVKLNRDAQLRRLTEMLKLIKPANT CCCHHHHHHHHHHHHCCCHHHHCCCCHHEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCC KIGDMRPDLWSFTHQMLQTQGALKEPIELGRAYSTLFLDVIPDR CCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHEEEEEEECCCC >Mature Secondary Structure MVKLLSRRGVRMRRLSYLSVLMLVLLAACSTSQATPTPAPKDSVKLQLNWVFDYSSSGFF CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEE AAEKNGRFGEQNLNVELIAGGFDANGYIDGTEKVSSGAADFGVASADSVIQARANGKPVV EECCCCCCCCCCCCEEEEEECCCCCCEECCHHHHCCCCCCCCCCCCCHHHHHCCCCCCEE GIAVLTQNSPLAILSLPGANIRTPQDLVGKKVLVSEGGATQLYNTLLTAQGIDLESAKPL EEEEEECCCCEEEEECCCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC PRFDSGIDQLIDGEIDALVAWNINEAIELSERGYPPSIMLMSDYGINSYELVIITTEKMA CCHHHHHHHHHCCCEEEEEEECCCHHHHHHCCCCCCEEEEEECCCCCEEEEEEEEEHHHC TENPDLVTRFLKATFKGWNDVIANPSQAVDYVVTYDVKLNRDAQLRRLTEMLKLIKPANT CCCHHHHHHHHHHHHCCCHHHHCCCCHHEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCC KIGDMRPDLWSFTHQMLQTQGALKEPIELGRAYSTLFLDVIPDR CCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA