| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899447
Identifier: 159899447
GI number: 159899447
Start: 3702994
End: 3704274
Strand: Reverse
Name: 159899447
Synonym: Haur_2928
Alternate gene names: NA
Gene position: 3704274-3702994 (Counterclockwise)
Preceding gene: 159899448
Following gene: 159899446
Centisome position: 58.37
GC content: 48.79
Gene sequence:
>1281_bases ATGCAGTTTGATACCTCGTATCTCAACAAAACCCCCAACAAAACCGCCCGTAACACCACGAGTTTCAAGCCGGAATTTGT GATTTTACACGAAACGGCGGGCTATGGCTCACTCGAATGGAATTTGCGGCCCGAAGTTCGCTCCAGTTATAATTATTTGA TTGCCCGTGATGGTAAGACCTATCACTACGTCAATGAAAAATCCTATATTGCTTGGCATGCTGGAGTACGCAGTTGGGCA CGCGGCTATAGCGGCGGCGAAATCAATGTATACGCGATTGGAGTTGAGGTTGAGGGACCAAATGATGGTACGCCGATCAC TACTGCCCAAACCAAAGCCTTGGTTGAATTAATTCGCTATTTTCGTGATACCTATGCGATTCCCATTAATCGTGACTATT TCTTTGCCCATAGCACGGTTGCACCTGGCTATAAAGATGATCCACGGGGCTATAGTGTTGAATATACCTTGAAATTGCTT GATGAAAGTAGCCTTCCCAGCACTGGCCCACGCCCCAATACCCTTGGCGCACAACTGCGCAACGAAGTCTATAAACTGGC CAAGGGTGAATATCGGCCTGATTGGATGTTTCATCAATATGCCTTCAAAAACAAACTTGGCTCGCCGATTCGGGTTGGCA TGGATTTTAGCGTGAAGGGCGTGCGCTATACTGGCGAGGTGTATGGCCGTGATGTAATTATTAGCCCATACAATCAATGG GATATTGTGCTTCGCGCCAATGATCTGACCGATCAAGATGTTTATAATGCCTTGATGCAATTTACCTATGGCGCGTTGGG CGTGGATTACCGACCGGATCAAGCCTTTTATCAATTTATCAGTCGGCCACCGCGCAAGCTCGTTGGAGTGCCGTTGGGTA ACAGCAGCCGCTTGCAAGCTGGCGATGGCGCGGCCTATGCAGCCCAACTTTTCTCGCTGGATGCGCTGTATACGCCAATT GCCGCCACTGGCACAACCAATTGGTCGGTAGTCAAGCAACTTAGTGCAATTGTGGCCGCTCAAAATGCCTCTGCCGCCGA TGCCGCGCTACGTGAAACGATCAACCGTGCCATGTATAGCCGCATCAATACAAGCTTCGATGCCAAATTGCCATTTATCA AAAAAGCTTTAGAAGCCAACCTTGGTGCGCCATTGTCAAGCCAACGCCGTTGGAGCTATCGCAATAACGAATATTTGTAT GTCGTCTATGCTGGTGATACGCTGTTTGCGCTGGCCAATAAACCTGCTGAAGTGCGTTTATTGAGCGAACAGGCCGATTA G
Upstream 100 bases:
>100_bases GAACCAATTCCTTAGTTTCTATATTTTGTAGTACATTAACAACGGGAATATTAGGAGCGGTAGTAATGATGCAATGATTG GCATCATGTAAGGAGCTTGT
Downstream 100 bases:
>100_bases TTCTCAGTTAATTATGAGCCAACTATCAGCCCCGTATGATGTCGTGTCGCAACTCCTTCTTAGATGATAGAGCTATGCAT CTAAGGAGGAGTTATGTTTA
Product: N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MQFDTSYLNKTPNKTARNTTSFKPEFVILHETAGYGSLEWNLRPEVRSSYNYLIARDGKTYHYVNEKSYIAWHAGVRSWA RGYSGGEINVYAIGVEVEGPNDGTPITTAQTKALVELIRYFRDTYAIPINRDYFFAHSTVAPGYKDDPRGYSVEYTLKLL DESSLPSTGPRPNTLGAQLRNEVYKLAKGEYRPDWMFHQYAFKNKLGSPIRVGMDFSVKGVRYTGEVYGRDVIISPYNQW DIVLRANDLTDQDVYNALMQFTYGALGVDYRPDQAFYQFISRPPRKLVGVPLGNSSRLQAGDGAAYAAQLFSLDALYTPI AATGTTNWSVVKQLSAIVAAQNASAADAALRETINRAMYSRINTSFDAKLPFIKKALEANLGAPLSSQRRWSYRNNEYLY VVYAGDTLFALANKPAEVRLLSEQAD
Sequences:
>Translated_426_residues MQFDTSYLNKTPNKTARNTTSFKPEFVILHETAGYGSLEWNLRPEVRSSYNYLIARDGKTYHYVNEKSYIAWHAGVRSWA RGYSGGEINVYAIGVEVEGPNDGTPITTAQTKALVELIRYFRDTYAIPINRDYFFAHSTVAPGYKDDPRGYSVEYTLKLL DESSLPSTGPRPNTLGAQLRNEVYKLAKGEYRPDWMFHQYAFKNKLGSPIRVGMDFSVKGVRYTGEVYGRDVIISPYNQW DIVLRANDLTDQDVYNALMQFTYGALGVDYRPDQAFYQFISRPPRKLVGVPLGNSSRLQAGDGAAYAAQLFSLDALYTPI AATGTTNWSVVKQLSAIVAAQNASAADAALRETINRAMYSRINTSFDAKLPFIKKALEANLGAPLSSQRRWSYRNNEYLY VVYAGDTLFALANKPAEVRLLSEQAD >Mature_426_residues MQFDTSYLNKTPNKTARNTTSFKPEFVILHETAGYGSLEWNLRPEVRSSYNYLIARDGKTYHYVNEKSYIAWHAGVRSWA RGYSGGEINVYAIGVEVEGPNDGTPITTAQTKALVELIRYFRDTYAIPINRDYFFAHSTVAPGYKDDPRGYSVEYTLKLL DESSLPSTGPRPNTLGAQLRNEVYKLAKGEYRPDWMFHQYAFKNKLGSPIRVGMDFSVKGVRYTGEVYGRDVIISPYNQW DIVLRANDLTDQDVYNALMQFTYGALGVDYRPDQAFYQFISRPPRKLVGVPLGNSSRLQAGDGAAYAAQLFSLDALYTPI AATGTTNWSVVKQLSAIVAAQNASAADAALRETINRAMYSRINTSFDAKLPFIKKALEANLGAPLSSQRRWSYRNNEYLY VVYAGDTLFALANKPAEVRLLSEQAD
Specific function: Unknown
COG id: COG3023
COG function: function code V; Negative regulator of beta-lactamase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47853; Mature: 47853
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFDTSYLNKTPNKTARNTTSFKPEFVILHETAGYGSLEWNLRPEVRSSYNYLIARDGKT CCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCHHHHCCCCEEEEECCCE YHYVNEKSYIAWHAGVRSWARGYSGGEINVYAIGVEVEGPNDGTPITTAQTKALVELIRY EEEECCCCEEEEHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHH FRDTYAIPINRDYFFAHSTVAPGYKDDPRGYSVEYTLKLLDESSLPSTGPRPNTLGAQLR HHHCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHH NEVYKLAKGEYRPDWMFHQYAFKNKLGSPIRVGMDFSVKGVRYTGEVYGRDVIISPYNQW HHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEECCCEEECCEEEECEECCCEEEECCCCCE DIVLRANDLTDQDVYNALMQFTYGALGVDYRPDQAFYQFISRPPRKLVGVPLGNSSRLQA EEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHEEEECCCCCCCEEC GDGAAYAAQLFSLDALYTPIAATGTTNWSVVKQLSAIVAAQNASAADAALRETINRAMYS CCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RINTSFDAKLPFIKKALEANLGAPLSSQRRWSYRNNEYLYVVYAGDTLFALANKPAEVRL HHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEE LSEQAD ECCCCC >Mature Secondary Structure MQFDTSYLNKTPNKTARNTTSFKPEFVILHETAGYGSLEWNLRPEVRSSYNYLIARDGKT CCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCHHHHCCCCEEEEECCCE YHYVNEKSYIAWHAGVRSWARGYSGGEINVYAIGVEVEGPNDGTPITTAQTKALVELIRY EEEECCCCEEEEHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHH FRDTYAIPINRDYFFAHSTVAPGYKDDPRGYSVEYTLKLLDESSLPSTGPRPNTLGAQLR HHHCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHH NEVYKLAKGEYRPDWMFHQYAFKNKLGSPIRVGMDFSVKGVRYTGEVYGRDVIISPYNQW HHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEECCCEEECCEEEECEECCCEEEECCCCCE DIVLRANDLTDQDVYNALMQFTYGALGVDYRPDQAFYQFISRPPRKLVGVPLGNSSRLQA EEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHEEEECCCCCCCEEC GDGAAYAAQLFSLDALYTPIAATGTTNWSVVKQLSAIVAAQNASAADAALRETINRAMYS CCCHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RINTSFDAKLPFIKKALEANLGAPLSSQRRWSYRNNEYLYVVYAGDTLFALANKPAEVRL HHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEE LSEQAD ECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA