The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is ypwA [H]

Identifier: 159899430

GI number: 159899430

Start: 3683244

End: 3684737

Strand: Reverse

Name: ypwA [H]

Synonym: Haur_2911

Alternate gene names: 159899430

Gene position: 3684737-3683244 (Counterclockwise)

Preceding gene: 159899435

Following gene: 159899429

Centisome position: 58.06

GC content: 50.8

Gene sequence:

>1494_bases
ATGAGCCAAGCTCTTGAGCAACTTCGCGACCATCTCGCAACTATCCGCGATCTTAATCACACCGCAGGATTGCTTGCCTG
GGATCAGCGCACTCAAATGCCGCGTGGTGGGGCCAGCACGCGTGCTGAGCAATTAGCTACCATCAGTCGAATTTCGCATG
AGCTATTCACTGGCGAGAAAACCCTCAGCTTGCTTGATGCGGTTGATGTTGCTGATTTATCGCCCGACTCTGATGATGCT
CGTTTGATCAGTCATACCCGCTACAATTACGAACGTTCGAGCAAATTGCCTGCCGAATTTGTCGCCAAACAATCGCGGGT
ACGGGCATTAGCGGGCAAAGTTTGGGAAGATGCCCGTGCCAACGCCGATTTCAGCCAGTTTCAGCCGCATCTTGAAACGA
TTGTTGAGATGGTGCGCGAACAAACCCAATTTCTGGGCTACGATGAACATCCCTACGATGCCTTGCTCAATAGCTACGAG
CGTGGTTTGACAACCAAGCAAGCGCTTGGCTTGTTCGATGAATTGAAGGCCGGCACTGTGCCATTGGTGCTCAAAATTGC
CGCGATGGGCGACGATGGCCGCGATGCCCCGTTGCATGGCAATTATCCCGAAGCGCTCCAAGAACAATTTGGCAAAAAAG
TGACCGTGCGTTATGGCTACGATTGGAATCGCGGTCGGCAAGATCGCAGCACCCATCCATTTTGTAGCAACTTTGGGCGC
AACGACGTACGGATCACCACGCGTTTTAATCCCAATTGGCTTTCACCAGCGCTTTTTGGCACATTGCATGAAACCGGGCA
TGCCTTGTACGAACAAAATATCAAGCCCGAACTTGATCGCACGCCGCTTGGTCGCGGTACCTCGTTGGGTGTCCACGAAT
CGCAATCGCGTATGTGGGAAAATATTGTTGGGCGTTCGCGACCATTCTGGGAGTTTTTCTACAGCGATTTGCAGGCGACC
TTCCCTGAGCCATTAGCCAATGTCGATCTGGAGCGCTTCTATCGGGCCGTTAATGCGGTTAAGCCCTCATTGATTCGCGT
CGAAGCTGATGAATTAACCTACAATTTGCATATTTTGCTGCGTATGGAGCTAGAAATTGCCTTGGTTGAAGGCACGCTCA
AGGTTGCCGATTTGCCCGAAGCTTGGAACGCCAAGATGCAAGCCTACCTTGGCATCACCCCAGCCAACGATGCTGAGGGT
GTACTCCAAGATATTCACTGGTCGGGCATGATGTTTGGCTACTTCCCCACCTACACTATTGGCAATGTGCTGTCGGTTCA
ACTATTTGATACGGCAATCGCCCAACATCCTGAGATTTGGGATGAAATGCGCCGTGGTGAATTTGGCACACTGCTTGGTT
GGATGCGTGAACATATCCATCAGCATGGCAGTAAATTCTTGCCTAACGAGTTGATTACCCGAGCAACGGGCCGGTCAATG
GATGCAGCGCCTTACGTTAAGTATTTACAAACCAAATTTGCTGAATTATATTAA

Upstream 100 bases:

>100_bases
CGTATGATCATATCAACATATGCTAAAATACTCTGGGAATAATCAGCCACTTAAGCTACATCTGGTTTATGCGGCTTTAA
CGAAAAGGATTTAAGCATTT

Downstream 100 bases:

>100_bases
CCACAGTAAATAAGCAATGCCTCGCCCCCTCTGCTCGCCAATTAGTCGAGGGGGCTGCTTTGAGCGTGAAATCTAGGCCC
AAAGCAGGATGCACCGAGCC

Product: carboxypeptidase Taq

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MSQALEQLRDHLATIRDLNHTAGLLAWDQRTQMPRGGASTRAEQLATISRISHELFTGEKTLSLLDAVDVADLSPDSDDA
RLISHTRYNYERSSKLPAEFVAKQSRVRALAGKVWEDARANADFSQFQPHLETIVEMVREQTQFLGYDEHPYDALLNSYE
RGLTTKQALGLFDELKAGTVPLVLKIAAMGDDGRDAPLHGNYPEALQEQFGKKVTVRYGYDWNRGRQDRSTHPFCSNFGR
NDVRITTRFNPNWLSPALFGTLHETGHALYEQNIKPELDRTPLGRGTSLGVHESQSRMWENIVGRSRPFWEFFYSDLQAT
FPEPLANVDLERFYRAVNAVKPSLIRVEADELTYNLHILLRMELEIALVEGTLKVADLPEAWNAKMQAYLGITPANDAEG
VLQDIHWSGMMFGYFPTYTIGNVLSVQLFDTAIAQHPEIWDEMRRGEFGTLLGWMREHIHQHGSKFLPNELITRATGRSM
DAAPYVKYLQTKFAELY

Sequences:

>Translated_497_residues
MSQALEQLRDHLATIRDLNHTAGLLAWDQRTQMPRGGASTRAEQLATISRISHELFTGEKTLSLLDAVDVADLSPDSDDA
RLISHTRYNYERSSKLPAEFVAKQSRVRALAGKVWEDARANADFSQFQPHLETIVEMVREQTQFLGYDEHPYDALLNSYE
RGLTTKQALGLFDELKAGTVPLVLKIAAMGDDGRDAPLHGNYPEALQEQFGKKVTVRYGYDWNRGRQDRSTHPFCSNFGR
NDVRITTRFNPNWLSPALFGTLHETGHALYEQNIKPELDRTPLGRGTSLGVHESQSRMWENIVGRSRPFWEFFYSDLQAT
FPEPLANVDLERFYRAVNAVKPSLIRVEADELTYNLHILLRMELEIALVEGTLKVADLPEAWNAKMQAYLGITPANDAEG
VLQDIHWSGMMFGYFPTYTIGNVLSVQLFDTAIAQHPEIWDEMRRGEFGTLLGWMREHIHQHGSKFLPNELITRATGRSM
DAAPYVKYLQTKFAELY
>Mature_496_residues
SQALEQLRDHLATIRDLNHTAGLLAWDQRTQMPRGGASTRAEQLATISRISHELFTGEKTLSLLDAVDVADLSPDSDDAR
LISHTRYNYERSSKLPAEFVAKQSRVRALAGKVWEDARANADFSQFQPHLETIVEMVREQTQFLGYDEHPYDALLNSYER
GLTTKQALGLFDELKAGTVPLVLKIAAMGDDGRDAPLHGNYPEALQEQFGKKVTVRYGYDWNRGRQDRSTHPFCSNFGRN
DVRITTRFNPNWLSPALFGTLHETGHALYEQNIKPELDRTPLGRGTSLGVHESQSRMWENIVGRSRPFWEFFYSDLQATF
PEPLANVDLERFYRAVNAVKPSLIRVEADELTYNLHILLRMELEIALVEGTLKVADLPEAWNAKMQAYLGITPANDAEGV
LQDIHWSGMMFGYFPTYTIGNVLSVQLFDTAIAQHPEIWDEMRRGEFGTLLGWMREHIHQHGSKFLPNELITRATGRSMD
AAPYVKYLQTKFAELY

Specific function: Unknown

COG id: COG2317

COG function: function code E; Zn-dependent carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001333 [H]

Pfam domain/function: PF02074 Peptidase_M32 [H]

EC number: NA

Molecular weight: Translated: 56563; Mature: 56432

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQALEQLRDHLATIRDLNHTAGLLAWDQRTQMPRGGASTRAEQLATISRISHELFTGEK
CCHHHHHHHHHHHHHHHCCHHHCEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHH
TLSLLDAVDVADLSPDSDDARLISHTRYNYERSSKLPAEFVAKQSRVRALAGKVWEDARA
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
NADFSQFQPHLETIVEMVREQTQFLGYDEHPYDALLNSYERGLTTKQALGLFDELKAGTV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PLVLKIAAMGDDGRDAPLHGNYPEALQEQFGKKVTVRYGYDWNRGRQDRSTHPFCSNFGR
EEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHCCC
NDVRITTRFNPNWLSPALFGTLHETGHALYEQNIKPELDRTPLGRGTSLGVHESQSRMWE
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
NIVGRSRPFWEFFYSDLQATFPEPLANVDLERFYRAVNAVKPSLIRVEADELTYNLHILL
HHHCCCCHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHCCCCEEEEEHHHEEEEEEEEE
RMELEIALVEGTLKVADLPEAWNAKMQAYLGITPANDAEGVLQDIHWSGMMFGYFPTYTI
EEEEEEEEEECCEEECCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHCCEEECCCCHHHH
GNVLSVQLFDTAIAQHPEIWDEMRRGEFGTLLGWMREHIHQHGSKFLPNELITRATGRSM
CCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC
DAAPYVKYLQTKFAELY
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQALEQLRDHLATIRDLNHTAGLLAWDQRTQMPRGGASTRAEQLATISRISHELFTGEK
CHHHHHHHHHHHHHHHCCHHHCEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHH
TLSLLDAVDVADLSPDSDDARLISHTRYNYERSSKLPAEFVAKQSRVRALAGKVWEDARA
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
NADFSQFQPHLETIVEMVREQTQFLGYDEHPYDALLNSYERGLTTKQALGLFDELKAGTV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PLVLKIAAMGDDGRDAPLHGNYPEALQEQFGKKVTVRYGYDWNRGRQDRSTHPFCSNFGR
EEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHCCC
NDVRITTRFNPNWLSPALFGTLHETGHALYEQNIKPELDRTPLGRGTSLGVHESQSRMWE
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
NIVGRSRPFWEFFYSDLQATFPEPLANVDLERFYRAVNAVKPSLIRVEADELTYNLHILL
HHHCCCCHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHCCCCEEEEEHHHEEEEEEEEE
RMELEIALVEGTLKVADLPEAWNAKMQAYLGITPANDAEGVLQDIHWSGMMFGYFPTYTI
EEEEEEEEEECCEEECCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHCCEEECCCCHHHH
GNVLSVQLFDTAIAQHPEIWDEMRRGEFGTLLGWMREHIHQHGSKFLPNELITRATGRSM
CCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC
DAAPYVKYLQTKFAELY
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]