The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899421

Identifier: 159899421

GI number: 159899421

Start: 3671239

End: 3672048

Strand: Reverse

Name: 159899421

Synonym: Haur_2902

Alternate gene names: NA

Gene position: 3672048-3671239 (Counterclockwise)

Preceding gene: 159899422

Following gene: 159899420

Centisome position: 57.86

GC content: 51.48

Gene sequence:

>810_bases
ATGAGCCGAGCCACGCCGTTTGCTAGCCGTATTTTAGTTGGGGTAACCAGTCTGATTGGGCTGGTTGCCTTTTTTTATCC
ATTTTTTCTAAGCGAAGTTCAGGCTGGCGATAATCATGCTGCCGATGCGCCTTTGATTATGTTGTTACTCGGGCCATTAT
TGCTCGGGATTATTCTGGCGGATCTCAATAGTCATGCGATGAATTCGCGGGTGGTGGCAGCCTTGGGCATGTTGGTGGCG
ATCAATGCAGTGCTGCGCTTGCCTGCTGGCCCAGGTGATAGCCCAACCTTTTTCTTTTTGGTCATTTTGGCGGGCTTTGT
CTATGGTGGGCGCTTTGGATTTTTACTAGGTAGCCTGAGTTTAGCAGTTTCGGCCTTGTTGGTGGCAGGGATTGGCCCAT
GGATGCCGTTTCAGATGTTGGCAATGGGCTGGTTGGGATTAAGCACCGCCTTGTTGCAGCCTATCAAACGCTGGTTGAAA
TTGGCCGATGCTGGGTGGGGCGAAGTCGTCCTGCTAGCGATATTTGGCTGGGTTTGGGGCTTACTCTTCGGCGGCTTGAT
GAACCTGACATTTTGGCCATTTAGCGCAGGCGAAAGCGCAATTTCCTGGCAACCAGGCTTGGGGTTTGGCCCAACCGTAG
AGCGCTATTGGGCCTTTTATCTGCTAACTTCATTGGGCTGGGATGCCACACGAGCCTTCTTCAATGTTTTGCTGATTATG
GCCTTTGGCAAGCCAATTCTGGCAGTCTTGCGGCGCTTTCAGCTACGGCTCAATTGGCAAACTCAGGAGAGCATAGAGCA
AAGAACATAG

Upstream 100 bases:

>100_bases
GGGAAGTACCGCTACCAGCCGAATTAGAGAAAATTCTGACGACCTTGCGCACCCGCTATGAAACAATTGTCTATCCCGAC
CCATTGATTGAAGCCGTTTC

Downstream 100 bases:

>100_bases
AGCATAGGGATCAGGTTTTGATCCACGAAGGACACGAAGGGCACGAAGGTTGAAACCACGAAGCACGCGAAGATCGTGAA
TGATGAGGCTATGGTCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: Transport System Permease Protein; ABC-Type Transporter Permease Components

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSRATPFASRILVGVTSLIGLVAFFYPFFLSEVQAGDNHAADAPLIMLLLGPLLLGIILADLNSHAMNSRVVAALGMLVA
INAVLRLPAGPGDSPTFFFLVILAGFVYGGRFGFLLGSLSLAVSALLVAGIGPWMPFQMLAMGWLGLSTALLQPIKRWLK
LADAGWGEVVLLAIFGWVWGLLFGGLMNLTFWPFSAGESAISWQPGLGFGPTVERYWAFYLLTSLGWDATRAFFNVLLIM
AFGKPILAVLRRFQLRLNWQTQESIEQRT

Sequences:

>Translated_269_residues
MSRATPFASRILVGVTSLIGLVAFFYPFFLSEVQAGDNHAADAPLIMLLLGPLLLGIILADLNSHAMNSRVVAALGMLVA
INAVLRLPAGPGDSPTFFFLVILAGFVYGGRFGFLLGSLSLAVSALLVAGIGPWMPFQMLAMGWLGLSTALLQPIKRWLK
LADAGWGEVVLLAIFGWVWGLLFGGLMNLTFWPFSAGESAISWQPGLGFGPTVERYWAFYLLTSLGWDATRAFFNVLLIM
AFGKPILAVLRRFQLRLNWQTQESIEQRT
>Mature_268_residues
SRATPFASRILVGVTSLIGLVAFFYPFFLSEVQAGDNHAADAPLIMLLLGPLLLGIILADLNSHAMNSRVVAALGMLVAI
NAVLRLPAGPGDSPTFFFLVILAGFVYGGRFGFLLGSLSLAVSALLVAGIGPWMPFQMLAMGWLGLSTALLQPIKRWLKL
ADAGWGEVVLLAIFGWVWGLLFGGLMNLTFWPFSAGESAISWQPGLGFGPTVERYWAFYLLTSLGWDATRAFFNVLLIMA
FGKPILAVLRRFQLRLNWQTQESIEQRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29311; Mature: 29180

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRATPFASRILVGVTSLIGLVAFFYPFFLSEVQAGDNHAADAPLIMLLLGPLLLGIILA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
DLNSHAMNSRVVAALGMLVAINAVLRLPAGPGDSPTFFFLVILAGFVYGGRFGFLLGSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
LAVSALLVAGIGPWMPFQMLAMGWLGLSTALLQPIKRWLKLADAGWGEVVLLAIFGWVWG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLFGGLMNLTFWPFSAGESAISWQPGLGFGPTVERYWAFYLLTSLGWDATRAFFNVLLIM
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AFGKPILAVLRRFQLRLNWQTQESIEQRT
HHCCHHHHHHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure 
SRATPFASRILVGVTSLIGLVAFFYPFFLSEVQAGDNHAADAPLIMLLLGPLLLGIILA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
DLNSHAMNSRVVAALGMLVAINAVLRLPAGPGDSPTFFFLVILAGFVYGGRFGFLLGSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
LAVSALLVAGIGPWMPFQMLAMGWLGLSTALLQPIKRWLKLADAGWGEVVLLAIFGWVWG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLFGGLMNLTFWPFSAGESAISWQPGLGFGPTVERYWAFYLLTSLGWDATRAFFNVLLIM
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AFGKPILAVLRRFQLRLNWQTQESIEQRT
HHCCHHHHHHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA