| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899415
Identifier: 159899415
GI number: 159899415
Start: 3666623
End: 3666988
Strand: Reverse
Name: 159899415
Synonym: Haur_2896
Alternate gene names: NA
Gene position: 3666988-3666623 (Counterclockwise)
Preceding gene: 159899419
Following gene: 159899414
Centisome position: 57.78
GC content: 51.37
Gene sequence:
>366_bases ATGATTAAGGCTTCACGACGGATGCTCGGTTTGTTGGCGGCAACCTGTGCTTTGGCTTTGGCTCCCTTGACTCCCAGTGC AGCAGCGCCCAATGCCTTGGATGTAAGTGTTTTTTGCGAAAATCTAGGTATGCGCAATAACCAAGGTTCATTCTCGTGCG ACGCGTTTGCTAGTGGTGGAACTGGCGATTATAGCTACAACTGGTCGGCGGTGCAAAATGCTACGATTCTGGAAAACTGG GGTAGCTATATTTACGGGAGCTGTGCGATTAACCAAAGTGCTCGGGTGAACGTTGTGGTTACCGATAACAGTGGAGCCAG CGTCAGCAAAATTGGGCGCGTGCTCTGCCGCAAAGTCGCCTCGTAA
Upstream 100 bases:
>100_bases ATTTCTCATGCAACTATTATTGATCCTAACCGTCAAATCAAGCACAATCGTGTTCTACGTAGCCATTTGCTGCGTAGGAT TGTAAGCGAAAGGATCGACG
Downstream 100 bases:
>100_bases GTTCGGCTAATTGGTCATGGGCATCCCTTCCTCTTCGCGATCTCCCGCGCGATGCCCAGTTTTTGAGCAGCAACAACCTC CAAAATATTCCCAATTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MIKASRRMLGLLAATCALALAPLTPSAAAPNALDVSVFCENLGMRNNQGSFSCDAFASGGTGDYSYNWSAVQNATILENW GSYIYGSCAINQSARVNVVVTDNSGASVSKIGRVLCRKVAS
Sequences:
>Translated_121_residues MIKASRRMLGLLAATCALALAPLTPSAAAPNALDVSVFCENLGMRNNQGSFSCDAFASGGTGDYSYNWSAVQNATILENW GSYIYGSCAINQSARVNVVVTDNSGASVSKIGRVLCRKVAS >Mature_121_residues MIKASRRMLGLLAATCALALAPLTPSAAAPNALDVSVFCENLGMRNNQGSFSCDAFASGGTGDYSYNWSAVQNATILENW GSYIYGSCAINQSARVNVVVTDNSGASVSKIGRVLCRKVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12601; Mature: 12601
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKASRRMLGLLAATCALALAPLTPSAAAPNALDVSVFCENLGMRNNQGSFSCDAFASGG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCC TGDYSYNWSAVQNATILENWGSYIYGSCAINQSARVNVVVTDNSGASVSKIGRVLCRKVA CCCCCCCCHHHCCCHHHHCCCCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHC S C >Mature Secondary Structure MIKASRRMLGLLAATCALALAPLTPSAAAPNALDVSVFCENLGMRNNQGSFSCDAFASGG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCC TGDYSYNWSAVQNATILENWGSYIYGSCAINQSARVNVVVTDNSGASVSKIGRVLCRKVA CCCCCCCCHHHCCCHHHHCCCCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA