| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899343
Identifier: 159899343
GI number: 159899343
Start: 3591999
End: 3593303
Strand: Reverse
Name: 159899343
Synonym: Haur_2824
Alternate gene names: NA
Gene position: 3593303-3591999 (Counterclockwise)
Preceding gene: 159899344
Following gene: 159899342
Centisome position: 56.62
GC content: 52.18
Gene sequence:
>1305_bases ATGGATTTTGCGCAATTACCAGTAGCGGTGATCGGGTCGGGGCCAGTTGGTTTGGCGGCGGCTGCCCATTTGTTGGCCCG TAACGAAACGCCGATTATTTTTGAGGCAGGCTCACGGGTCGCCGATTCGGTGCAGCGTTGGGGCCATGTACGCTTATTCT CGGCTTGGGAATTTAATATCGATCCTGTGGCGGAGCAGCTTTTGATTGGTGCAGGCTGGCAAACTCCCAATTTGGCCGAA TTTCCAACTGGTGCAGAATTAGTACGCGATTATTTGCAGCCTTTAGCTCAATTGCCGCAAATTCAGCTCCATTTAAAGTT CAACAGCAAAGTTGTGGCCATTACCCGTTTGGGCTTAGATAAATTGAAGAATGCTGGACGCGCCACCACGCCATTTGTGC TGACGATTGAAACTGTTGGTGCAACCCACCAAATCTATGCCAAAGCAGTGATTGATGCTTCAGGAACCTATCGCAACCCG AATCCCTTGGGCGTGGCAGGGGTTCCAGCCTTGGGCGAAACAGCGGCCAACAACCAAATTTACTATGGCATCCCCGACAT TTTGGGCAATGATCGCGCTCGTTATGCCAATCGCTCGGTGGCGGTCGTCGGTAGCGGCCATTCAGCCTTCAATGCCTTGC TCGATCTAGCTGAATTGGCTGAGCAAGCACCTGAAACCAGCGTTACTTGGATTATGCGGCGTGGGCAGGTTGATGCAGCT TTATATGGCGGCGGAGCTAATGATCAATTAGTCCAACGCGGCCTTTTAGGTGGTCGGGTTGAGCAATTAGTGGCAAGCGG GCGCTTTAAACTGGTTACAGGCTTTGGTATTGAGCGCATTACTCAGGCTGAAGGCAAACTTGACTTGCAGGCAGGTGAGC GCCAATTAACAGGCTTTGATCAATTAATCGCAACCACAGGTTTTCGCCCAGATTTAAGCATGCTCAGTGAAATTCGTTTA GATCTTGATGCGGCAGTCGAAAGTCCACGGGTTTTAGCCCCCTTGATTGATCCAAATGAGCATAGTTGCGGCACGGTGCG CCCACACGGCGCAGAAGAATTGCAGCAGCCCGAGCCAAATTTCTATATTGTGGGCATGAAAAGCTATGGTCGCGCTCCAA CCTTCCTCATGCGCACAGGCTATGAGCAAGTACGCTCGGTGGTGGCAGCGCTGGTTGGCGATTGGCAAGCGGCGCGTGAG GTGCAGTTGGTGCTGCCAGAAACTGGCGTTTGCAAAACCCAATTCGGTGGCGAAGCCTGCTGTGGTACAACTCCAACCCG CAGCGAGATTCTTTTGCAGTTGTAG
Upstream 100 bases:
>100_bases GATTTCAATCGAAAATTTTCAATCTATCCATCAGCCTGATGGATTTTCTTTCGGGTTTTATATTGAAAATTTTCAATTTA CTGTTTATAGGGGGCTTTGA
Downstream 100 bases:
>100_bases AATGGCCGCTTAACATCGTTTTTGCAATGCTGAAGGATTTTGGTTATGCGGCGAAGCCCGTTTTATGGCTGGTGGATTGT GAGCATGCTGGGATTTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Oxidoreductase; Peptidase M; Flavoprotein Involved In K+ Transport; FAD Dependent Oxidoreductase Domain-Containing Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Flavoprotein; Monooxygenase
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MDFAQLPVAVIGSGPVGLAAAAHLLARNETPIIFEAGSRVADSVQRWGHVRLFSAWEFNIDPVAEQLLIGAGWQTPNLAE FPTGAELVRDYLQPLAQLPQIQLHLKFNSKVVAITRLGLDKLKNAGRATTPFVLTIETVGATHQIYAKAVIDASGTYRNP NPLGVAGVPALGETAANNQIYYGIPDILGNDRARYANRSVAVVGSGHSAFNALLDLAELAEQAPETSVTWIMRRGQVDAA LYGGGANDQLVQRGLLGGRVEQLVASGRFKLVTGFGIERITQAEGKLDLQAGERQLTGFDQLIATTGFRPDLSMLSEIRL DLDAAVESPRVLAPLIDPNEHSCGTVRPHGAEELQQPEPNFYIVGMKSYGRAPTFLMRTGYEQVRSVVAALVGDWQAARE VQLVLPETGVCKTQFGGEACCGTTPTRSEILLQL
Sequences:
>Translated_434_residues MDFAQLPVAVIGSGPVGLAAAAHLLARNETPIIFEAGSRVADSVQRWGHVRLFSAWEFNIDPVAEQLLIGAGWQTPNLAE FPTGAELVRDYLQPLAQLPQIQLHLKFNSKVVAITRLGLDKLKNAGRATTPFVLTIETVGATHQIYAKAVIDASGTYRNP NPLGVAGVPALGETAANNQIYYGIPDILGNDRARYANRSVAVVGSGHSAFNALLDLAELAEQAPETSVTWIMRRGQVDAA LYGGGANDQLVQRGLLGGRVEQLVASGRFKLVTGFGIERITQAEGKLDLQAGERQLTGFDQLIATTGFRPDLSMLSEIRL DLDAAVESPRVLAPLIDPNEHSCGTVRPHGAEELQQPEPNFYIVGMKSYGRAPTFLMRTGYEQVRSVVAALVGDWQAARE VQLVLPETGVCKTQFGGEACCGTTPTRSEILLQL >Mature_434_residues MDFAQLPVAVIGSGPVGLAAAAHLLARNETPIIFEAGSRVADSVQRWGHVRLFSAWEFNIDPVAEQLLIGAGWQTPNLAE FPTGAELVRDYLQPLAQLPQIQLHLKFNSKVVAITRLGLDKLKNAGRATTPFVLTIETVGATHQIYAKAVIDASGTYRNP NPLGVAGVPALGETAANNQIYYGIPDILGNDRARYANRSVAVVGSGHSAFNALLDLAELAEQAPETSVTWIMRRGQVDAA LYGGGANDQLVQRGLLGGRVEQLVASGRFKLVTGFGIERITQAEGKLDLQAGERQLTGFDQLIATTGFRPDLSMLSEIRL DLDAAVESPRVLAPLIDPNEHSCGTVRPHGAEELQQPEPNFYIVGMKSYGRAPTFLMRTGYEQVRSVVAALVGDWQAARE VQLVLPETGVCKTQFGGEACCGTTPTRSEILLQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46656; Mature: 46656
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFAQLPVAVIGSGPVGLAAAAHLLARNETPIIFEAGSRVADSVQRWGHVRLFSAWEFNI CCHHHCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCEEEEEEEECCC DPVAEQLLIGAGWQTPNLAEFPTGAELVRDYLQPLAQLPQIQLHLKFNSKVVAITRLGLD CHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCEEEEEEECCHH KLKNAGRATTPFVLTIETVGATHQIYAKAVIDASGTYRNPNPLGVAGVPALGETAANNQI HHHCCCCCCCCEEEEEEECCCCHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEE YYGIPDILGNDRARYANRSVAVVGSGHSAFNALLDLAELAEQAPETSVTWIMRRGQVDAA EEECHHHHCCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEHEEECCCCCEE LYGGGANDQLVQRGLLGGRVEQLVASGRFKLVTGFGIERITQAEGKLDLQAGERQLTGFD EECCCCCHHHHHHHHCCHHHHHHHHCCCEEEEECCCHHHHHHCCCCEEECCCCCHHHHHH QLIATTGFRPDLSMLSEIRLDLDAAVESPRVLAPLIDPNEHSCGTVRPHGAEELQQPEPN HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCC FYIVGMKSYGRAPTFLMRTGYEQVRSVVAALVGDWQAAREVQLVLPETGVCKTQFGGEAC EEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHCHHHHCEEEEECCCCCCEECCCCCCCC CGTTPTRSEILLQL CCCCCCCHHHEEEC >Mature Secondary Structure MDFAQLPVAVIGSGPVGLAAAAHLLARNETPIIFEAGSRVADSVQRWGHVRLFSAWEFNI CCHHHCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCEEEEEEEECCC DPVAEQLLIGAGWQTPNLAEFPTGAELVRDYLQPLAQLPQIQLHLKFNSKVVAITRLGLD CHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCEEEEEEECCHH KLKNAGRATTPFVLTIETVGATHQIYAKAVIDASGTYRNPNPLGVAGVPALGETAANNQI HHHCCCCCCCCEEEEEEECCCCHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEE YYGIPDILGNDRARYANRSVAVVGSGHSAFNALLDLAELAEQAPETSVTWIMRRGQVDAA EEECHHHHCCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEHEEECCCCCEE LYGGGANDQLVQRGLLGGRVEQLVASGRFKLVTGFGIERITQAEGKLDLQAGERQLTGFD EECCCCCHHHHHHHHCCHHHHHHHHCCCEEEEECCCHHHHHHCCCCEEECCCCCHHHHHH QLIATTGFRPDLSMLSEIRLDLDAAVESPRVLAPLIDPNEHSCGTVRPHGAEELQQPEPN HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCC FYIVGMKSYGRAPTFLMRTGYEQVRSVVAALVGDWQAAREVQLVLPETGVCKTQFGGEAC EEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHCHHHHCEEEEECCCCCCEECCCCCCCC CGTTPTRSEILLQL CCCCCCCHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA