The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899294

Identifier: 159899294

GI number: 159899294

Start: 3533192

End: 3534280

Strand: Reverse

Name: 159899294

Synonym: Haur_2775

Alternate gene names: NA

Gene position: 3534280-3533192 (Counterclockwise)

Preceding gene: 159899303

Following gene: 159899292

Centisome position: 55.69

GC content: 52.62

Gene sequence:

>1089_bases
ATGGCATCGTCAGTGGCTCTGCCAACGTTTCAATCAACCGCCCGATTATACCGTTGGTTGATTCAACCTGGTGCTGAGGT
AGCAGCAGGCCAGCTTGTAGCGTTGGTTGTTGATGCACACGCTGAATGGGCGCTTCCAGCACAGCAAACTGGAACGGTTG
CGGCATTATTAGTTGATGAGGGAGCCACCCTCGATGTGACTACTCCATTATTACAATTTGTTGAAATGGTGTCAAAACGC
CAACTTACTGTCACCCCACTGGCTCGTTGCATTGCCGAGCGCCATCAACTCGATTTAAGCACAATCAGTGGTACGCTCGC
CGATGGGCGGGTGGGCAAACGCGATATTCTGGCGCATTTGCCCGATGTCTCCCCAACGTTAGCTGAGCCAACCGAGCAAC
TTGCCGCTCCTGCCGATGGGTTTTGTGTCGCCGAACAGATGGGCAATGCTTTTGCCCAATCTGAGCAAGTAATTGTTGTT
GCTGCTCCCAAAAACCCGCCAATCAGCCAAACAACGCCGCCACAAGCAAGCACGCTTCAGCCGTGGACTGAGGCCCAACT
CCAGCAGATTCAGCTGCGCCAACTTGCCGCAGCCAGCATTCCCCAAGCCTATTGTTCGCACGCCATCAGCCTCGATCGGT
TTGCTTCAACCGAATTAACCGCGCATTTATTGCTCGCCACAATTCAGGTCTTGCAACGCCATCCACTATTACGCAGTGTT
TGGTCTGCTGGTGATCGTTTGGAACGGGCTAGTTTGCATATTCAGGTTGAACATCCTTTGGGTCGCTGTAGCATTCCATT
CGCCGCCGATTTGAATTTGCGTGGCTTGCAACGGGCATTAACCAGCCCAGCCACTGAGCAAGCTGGGGTGTTTAGCTTCA
TTCAAAGTGCGGTGAATTTGTGGAGTGCTGCGCCGATCAACTATGGTCAATCGGCGACGTTGCATATTGGGGCTACCCGC
AAAGTGTTGGTTGGCGAGGCATTGCAAATTAGCCAACAAGCGATCGCCACCCTCAGTTATGATACTCGTTTGATCAGTGA
TGCTGCTGCCGAGGCATTTTTAGCGGATCTCGCCAAAGCACTGGCTTAA

Upstream 100 bases:

>100_bases
ATAGCTTACGTCTCAGCGTGGAGTCACCCCTTGTCGATGGTGCTTGCTCCTGCTAATGTGCTGCTCAACTGTCATTCATG
TAGATCACAAAGGAGTGTTC

Downstream 100 bases:

>100_bases
TTTAACGATTGAACGGCAATTGCATCGGCCCATGTTAACGTGCCTGGTATGGCGCTAAGCCCAATGCGGCCAATTTGGCC
TGGATCAAACCAAAAATCGC

Product: E3 binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MASSVALPTFQSTARLYRWLIQPGAEVAAGQLVALVVDAHAEWALPAQQTGTVAALLVDEGATLDVTTPLLQFVEMVSKR
QLTVTPLARCIAERHQLDLSTISGTLADGRVGKRDILAHLPDVSPTLAEPTEQLAAPADGFCVAEQMGNAFAQSEQVIVV
AAPKNPPISQTTPPQASTLQPWTEAQLQQIQLRQLAAASIPQAYCSHAISLDRFASTELTAHLLLATIQVLQRHPLLRSV
WSAGDRLERASLHIQVEHPLGRCSIPFAADLNLRGLQRALTSPATEQAGVFSFIQSAVNLWSAAPINYGQSATLHIGATR
KVLVGEALQISQQAIATLSYDTRLISDAAAEAFLADLAKALA

Sequences:

>Translated_362_residues
MASSVALPTFQSTARLYRWLIQPGAEVAAGQLVALVVDAHAEWALPAQQTGTVAALLVDEGATLDVTTPLLQFVEMVSKR
QLTVTPLARCIAERHQLDLSTISGTLADGRVGKRDILAHLPDVSPTLAEPTEQLAAPADGFCVAEQMGNAFAQSEQVIVV
AAPKNPPISQTTPPQASTLQPWTEAQLQQIQLRQLAAASIPQAYCSHAISLDRFASTELTAHLLLATIQVLQRHPLLRSV
WSAGDRLERASLHIQVEHPLGRCSIPFAADLNLRGLQRALTSPATEQAGVFSFIQSAVNLWSAAPINYGQSATLHIGATR
KVLVGEALQISQQAIATLSYDTRLISDAAAEAFLADLAKALA
>Mature_361_residues
ASSVALPTFQSTARLYRWLIQPGAEVAAGQLVALVVDAHAEWALPAQQTGTVAALLVDEGATLDVTTPLLQFVEMVSKRQ
LTVTPLARCIAERHQLDLSTISGTLADGRVGKRDILAHLPDVSPTLAEPTEQLAAPADGFCVAEQMGNAFAQSEQVIVVA
APKNPPISQTTPPQASTLQPWTEAQLQQIQLRQLAAASIPQAYCSHAISLDRFASTELTAHLLLATIQVLQRHPLLRSVW
SAGDRLERASLHIQVEHPLGRCSIPFAADLNLRGLQRALTSPATEQAGVFSFIQSAVNLWSAAPINYGQSATLHIGATRK
VLVGEALQISQQAIATLSYDTRLISDAAAEAFLADLAKALA

Specific function: Unknown

COG id: COG0508

COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38597; Mature: 38465

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50968 BIOTINYL_LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSVALPTFQSTARLYRWLIQPGAEVAAGQLVALVVDAHAEWALPAQQTGTVAALLVDE
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCCCCCCCCCCEEEEEECC
GATLDVTTPLLQFVEMVSKRQLTVTPLARCIAERHQLDLSTISGTLADGRVGKRDILAHL
CCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHC
PDVSPTLAEPTEQLAAPADGFCVAEQMGNAFAQSEQVIVVAAPKNPPISQTTPPQASTLQ
CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC
PWTEAQLQQIQLRQLAAASIPQAYCSHAISLDRFASTELTAHLLLATIQVLQRHPLLRSV
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
WSAGDRLERASLHIQVEHPLGRCSIPFAADLNLRGLQRALTSPATEQAGVFSFIQSAVNL
HHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
WSAAPINYGQSATLHIGATRKVLVGEALQISQQAIATLSYDTRLISDAAAEAFLADLAKA
HHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LA
HC
>Mature Secondary Structure 
ASSVALPTFQSTARLYRWLIQPGAEVAAGQLVALVVDAHAEWALPAQQTGTVAALLVDE
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCCCCCCCCCCCEEEEEECC
GATLDVTTPLLQFVEMVSKRQLTVTPLARCIAERHQLDLSTISGTLADGRVGKRDILAHL
CCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHC
PDVSPTLAEPTEQLAAPADGFCVAEQMGNAFAQSEQVIVVAAPKNPPISQTTPPQASTLQ
CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC
PWTEAQLQQIQLRQLAAASIPQAYCSHAISLDRFASTELTAHLLLATIQVLQRHPLLRSV
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
WSAGDRLERASLHIQVEHPLGRCSIPFAADLNLRGLQRALTSPATEQAGVFSFIQSAVNL
HHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
WSAAPINYGQSATLHIGATRKVLVGEALQISQQAIATLSYDTRLISDAAAEAFLADLAKA
HHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LA
HC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA