| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is glnH [H]
Identifier: 159899279
GI number: 159899279
Start: 3514174
End: 3515007
Strand: Reverse
Name: glnH [H]
Synonym: Haur_2760
Alternate gene names: 159899279
Gene position: 3515007-3514174 (Counterclockwise)
Preceding gene: 159899280
Following gene: 159899278
Centisome position: 55.38
GC content: 51.44
Gene sequence:
>834_bases ATGAAACGCCTCAATGTTGTGGCTCTGTTGAGCTTACTGTTGGTTGTGCTGGGCGCATGTGGCGCAGAGTCAGCAACTCC AACAACTGCTCCAACAACCGCTTCGACCACCGCTCCCGTCGCTGGCAAGATCGATCTTGCTGGCCGTGAAGTCAGCATCG CCGTCGAAAACTTGTACCCACCATTCAACTACATCAACCCGCAAACGGGCAAAGGCGAAGGCTGGGATTACGATGCTTGG ACAGCGATTTGTGCTGAGTTGAACTGTAAACCAGTTTTCAAAGAAACCTCATGGGAAGGCATGATCCAAGCGGTTGGCAA TGGTCAATTCGACGCTGCTGCCGATGGGATCACGATCACGCCTGAACGAGCTGAGCAAGTGGCTTTCTCCGATGGCTATA TTCAAATTAGCCAACGCCTGTTGGTGCGCAACGATGAAACTCGTTTCACCAGCATGGACGAATTCGCCAAAACTGAATTC CGCTTAGGCACGCAAACTGGCACCAGCAACTACGAAACCGCCAAAGGTTTGCTCGATGAAGCCCGCATCCAAGGTTTTGA AACCTTCCCATTTGCGGTAGCCGCCTTGATCAACGGCGACGTTGACGCGGTGATTATGGACGAAACCGCTGGCCAAGGCT ATGTTGGCAACAACAGCGACCAATTGAAGCTGGTTGGCGACCCAATCAAGAGCGATCAATTGGGCTTTATTTTTCCAAAG AACAGCGATTTGGTTGAGCCAGTGAATGCCGCCCTCAAGGCGCTGCGCGAAAATGGCAAGCTAGCTGAGCTTGAAAAGAA ATATTTCGGCCCTGATTTCAAATTGCCCGAATAA
Upstream 100 bases:
>100_bases CGCAATAAGCCCTAGCAATTTTTGATTTTAGGCCAAGATTTTGCAAAACAACCGTGCGATTGACGGTATAATACCAACTC TATATCAGGAGGAACTGCAG
Downstream 100 bases:
>100_bases GCTCATCAATTCAGTGGTGTGGTGCATTGAGGCGCTACACCACTGGGTTTATTCCATCCTCTCCTTAGGCATCACAAGGA GTTCCCATGGCTGCCGACCT
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKRLNVVALLSLLLVVLGACGAESATPTTAPTTASTTAPVAGKIDLAGREVSIAVENLYPPFNYINPQTGKGEGWDYDAW TAICAELNCKPVFKETSWEGMIQAVGNGQFDAAADGITITPERAEQVAFSDGYIQISQRLLVRNDETRFTSMDEFAKTEF RLGTQTGTSNYETAKGLLDEARIQGFETFPFAVAALINGDVDAVIMDETAGQGYVGNNSDQLKLVGDPIKSDQLGFIFPK NSDLVEPVNAALKALRENGKLAELEKKYFGPDFKLPE
Sequences:
>Translated_277_residues MKRLNVVALLSLLLVVLGACGAESATPTTAPTTASTTAPVAGKIDLAGREVSIAVENLYPPFNYINPQTGKGEGWDYDAW TAICAELNCKPVFKETSWEGMIQAVGNGQFDAAADGITITPERAEQVAFSDGYIQISQRLLVRNDETRFTSMDEFAKTEF RLGTQTGTSNYETAKGLLDEARIQGFETFPFAVAALINGDVDAVIMDETAGQGYVGNNSDQLKLVGDPIKSDQLGFIFPK NSDLVEPVNAALKALRENGKLAELEKKYFGPDFKLPE >Mature_277_residues MKRLNVVALLSLLLVVLGACGAESATPTTAPTTASTTAPVAGKIDLAGREVSIAVENLYPPFNYINPQTGKGEGWDYDAW TAICAELNCKPVFKETSWEGMIQAVGNGQFDAAADGITITPERAEQVAFSDGYIQISQRLLVRNDETRFTSMDEFAKTEF RLGTQTGTSNYETAKGLLDEARIQGFETFPFAVAALINGDVDAVIMDETAGQGYVGNNSDQLKLVGDPIKSDQLGFIFPK NSDLVEPVNAALKALRENGKLAELEKKYFGPDFKLPE
Specific function: Involved in a glutamine-transport system glnHPQ [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=248, Percent_Identity=32.6612903225806, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788228, Length=222, Percent_Identity=25.6756756756757, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787085, Length=229, Percent_Identity=25.764192139738, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787088, Length=229, Percent_Identity=25.764192139738, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29915; Mature: 29915
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLNVVALLSLLLVVLGACGAESATPTTAPTTASTTAPVAGKIDLAGREVSIAVENLYP CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCC PFNYINPQTGKGEGWDYDAWTAICAELNCKPVFKETSWEGMIQAVGNGQFDAAADGITIT CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEC PERAEQVAFSDGYIQISQRLLVRNDETRFTSMDEFAKTEFRLGTQTGTSNYETAKGLLDE HHHHHHEEECCCHHEEEHHHEEECCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHH ARIQGFETFPFAVAALINGDVDAVIMDETAGQGYVGNNSDQLKLVGDPIKSDQLGFIFPK HHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEECC NSDLVEPVNAALKALRENGKLAELEKKYFGPDFKLPE CCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKRLNVVALLSLLLVVLGACGAESATPTTAPTTASTTAPVAGKIDLAGREVSIAVENLYP CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCC PFNYINPQTGKGEGWDYDAWTAICAELNCKPVFKETSWEGMIQAVGNGQFDAAADGITIT CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEC PERAEQVAFSDGYIQISQRLLVRNDETRFTSMDEFAKTEFRLGTQTGTSNYETAKGLLDE HHHHHHEEECCCHHEEEHHHEEECCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHH ARIQGFETFPFAVAALINGDVDAVIMDETAGQGYVGNNSDQLKLVGDPIKSDQLGFIFPK HHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEECC NSDLVEPVNAALKALRENGKLAELEKKYFGPDFKLPE CCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]