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The map label for this gene is crtB [H]

Identifier: 159899222

GI number: 159899222

Start: 3456600

End: 3457574

Strand: Direct

Name: crtB [H]

Synonym: Haur_2703

Alternate gene names: 159899222

Gene position: 3456600-3457574 (Clockwise)

Preceding gene: 159899221

Following gene: 159899223

Centisome position: 54.46

GC content: 49.85

Gene sequence:

>975_bases
ATGTCTTGGCCTTCGCTCGATCCTCAAATGTGTGCTGGGTTGACCTTACCAGCTCAATTTATTCCAACGGTTGCCGAGTG
CGTGTCACATCAGCCCAGCAACCAATGGCTTAATCATGCTTATGCCCATTGTACCGAACTAACGAACGTTCACTCAAAGA
GCTTCTATTTTAGTACTCAATTGTTGCCTGCTCGGAAGCGTGATGCAATTCGGGTGTTGTATGCTTTCTGTCGAACGAGC
GACGACTTGGTAGACATGCACCCTGAAACAGCCCCAGAACGTTTGCAACAATGGCTCAAAACCTTGCGTTCCACCCCGCG
CCACGACGACCCCGTGCCATTAGCTTGGCATCATGTGCGCAACCATTTTCGCATTTCTAGCAAACTTGAATCAGAATTAT
TGGCAGGAGTCGAGATGGATCTCTCGATTAATCGCTATGCGACCTTTGCCGATTTATGGCTCTATTGCTATCGTGTGGCT
TCGGTGGTCGGGTTGCTCAGCATGCAGGTAATTGGCTACGCTGCAGGAGCCGTGCCCTACGCAATCAAATTAGGCGTGGC
CTTGCAATTAACCAACATTCTGCGCGATATTGGCGAAGATGCGCGGCGCAACCGAATTTACCTACCAAAAGAAGATCTAG
AGCGCTTCGGGGTGAGCGAACAAGATATTTTGAATGGGGTGCGCAGCCCACAGATGCAGCAATTATTACAATTTGAAATG
CAGCGGGCGCATCAACTCTACGATGAAAGTTGGCAGGGCATCGGGTTATTGCACCCCGATTCACGCTTTGCCGTGGCAAC
CGCCGCAACTGTCTATCGTGGCATTCTTGATCAGATTGTGCGCAATAACTATGATGTGTTTAATCGACGCGCCAGCCTCT
CGTTAGGGGCAAAATTGGCTTATTTACCCAAAATTCTCTGGCGCTTGCGCAAGCTCAACCGTGAGTTTCCGCTTGATCAA
TGGGGGCAAGTATGA

Upstream 100 bases:

>100_bases
AATTATTGGCCTAATTCTTGCGCCGACTCATCCAAAACCAAACCGTTTGCGTAGCACCAAAAGCAAACCTATGGTGAGTC
TGTAGCAGGAAGGATGCGCT

Downstream 100 bases:

>100_bases
TTTTAGTAACTGGTGGCACAGGCTATGTTGGTTCACGTTTGATTGAAAAATTACGCCAACGCCCTGAGCCAGTGCGAGTG
TTGGTTCGCACCCCAGAAAA

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSWPSLDPQMCAGLTLPAQFIPTVAECVSHQPSNQWLNHAYAHCTELTNVHSKSFYFSTQLLPARKRDAIRVLYAFCRTS
DDLVDMHPETAPERLQQWLKTLRSTPRHDDPVPLAWHHVRNHFRISSKLESELLAGVEMDLSINRYATFADLWLYCYRVA
SVVGLLSMQVIGYAAGAVPYAIKLGVALQLTNILRDIGEDARRNRIYLPKEDLERFGVSEQDILNGVRSPQMQQLLQFEM
QRAHQLYDESWQGIGLLHPDSRFAVATAATVYRGILDQIVRNNYDVFNRRASLSLGAKLAYLPKILWRLRKLNREFPLDQ
WGQV

Sequences:

>Translated_324_residues
MSWPSLDPQMCAGLTLPAQFIPTVAECVSHQPSNQWLNHAYAHCTELTNVHSKSFYFSTQLLPARKRDAIRVLYAFCRTS
DDLVDMHPETAPERLQQWLKTLRSTPRHDDPVPLAWHHVRNHFRISSKLESELLAGVEMDLSINRYATFADLWLYCYRVA
SVVGLLSMQVIGYAAGAVPYAIKLGVALQLTNILRDIGEDARRNRIYLPKEDLERFGVSEQDILNGVRSPQMQQLLQFEM
QRAHQLYDESWQGIGLLHPDSRFAVATAATVYRGILDQIVRNNYDVFNRRASLSLGAKLAYLPKILWRLRKLNREFPLDQ
WGQV
>Mature_323_residues
SWPSLDPQMCAGLTLPAQFIPTVAECVSHQPSNQWLNHAYAHCTELTNVHSKSFYFSTQLLPARKRDAIRVLYAFCRTSD
DLVDMHPETAPERLQQWLKTLRSTPRHDDPVPLAWHHVRNHFRISSKLESELLAGVEMDLSINRYATFADLWLYCYRVAS
VVGLLSMQVIGYAAGAVPYAIKLGVALQLTNILRDIGEDARRNRIYLPKEDLERFGVSEQDILNGVRSPQMQQLLQFEMQ
RAHQLYDESWQGIGLLHPDSRFAVATAATVYRGILDQIVRNNYDVFNRRASLSLGAKLAYLPKILWRLRKLNREFPLDQW
GQV

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 37218; Mature: 37087

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS01044 SQUALEN_PHYTOEN_SYN_1 ; PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWPSLDPQMCAGLTLPAQFIPTVAECVSHQPSNQWLNHAYAHCTELTNVHSKSFYFSTQ
CCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEEHHH
LLPARKRDAIRVLYAFCRTSDDLVDMHPETAPERLQQWLKTLRSTPRHDDPVPLAWHHVR
CCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
NHFRISSKLESELLAGVEMDLSINRYATFADLWLYCYRVASVVGLLSMQVIGYAAGAVPY
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIKLGVALQLTNILRDIGEDARRNRIYLPKEDLERFGVSEQDILNGVRSPQMQQLLQFEM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHH
QRAHQLYDESWQGIGLLHPDSRFAVATAATVYRGILDQIVRNNYDVFNRRASLSLGAKLA
HHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YLPKILWRLRKLNREFPLDQWGQV
HHHHHHHHHHHHCCCCCCHHCCCC
>Mature Secondary Structure 
SWPSLDPQMCAGLTLPAQFIPTVAECVSHQPSNQWLNHAYAHCTELTNVHSKSFYFSTQ
CCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEEHHH
LLPARKRDAIRVLYAFCRTSDDLVDMHPETAPERLQQWLKTLRSTPRHDDPVPLAWHHVR
CCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
NHFRISSKLESELLAGVEMDLSINRYATFADLWLYCYRVASVVGLLSMQVIGYAAGAVPY
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIKLGVALQLTNILRDIGEDARRNRIYLPKEDLERFGVSEQDILNGVRSPQMQQLLQFEM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHH
QRAHQLYDESWQGIGLLHPDSRFAVATAATVYRGILDQIVRNNYDVFNRRASLSLGAKLA
HHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YLPKILWRLRKLNREFPLDQWGQV
HHHHHHHHHHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA