| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899214
Identifier: 159899214
GI number: 159899214
Start: 3451543
End: 3451956
Strand: Direct
Name: 159899214
Synonym: Haur_2695
Alternate gene names: NA
Gene position: 3451543-3451956 (Clockwise)
Preceding gene: 159899213
Following gene: 159899215
Centisome position: 54.38
GC content: 53.86
Gene sequence:
>414_bases TTGGCGCTGCTCTATACATTGGCCGTATTTGGCCTAGCATGGCATAATTGGACAGGTAGCACAACCCAGCCTAGCCTTCA ATTGCAAATCGGAGCCACGATCAGCGCAGCCTTCCAGCAAGGGGGGCGGGCTGCTTTGATTAATATCATCGGAAATGTGG CGGCATTTGCCCCTAGCGGCTGGCTTTTAGCTTTCTGGCGGCCCAAACTGCGGCTTTGGCTCATTGGCCTCATTGGCCTT GGGTTAAGCTGCACCGTCGAGCTTGGTCAATATTGGCTGGGCTATCGGGTTGTTGATATTGATGATGTTGTGTTGAATAG CTTGGGGTTTAGCCTCGCTGGCAGCGTTGCTCGCGCAAGCCAACGCTTGATTCAACGGTGTACGAGGGAAGTCGATCGTG GCGATTCCAGCTGA
Upstream 100 bases:
>100_bases TAGGCCCAAGCCTTAAGCTGTTTGACGATACAGTGAGCGGGGACGAGCAACTCGTCCCCGTTTGTTATGTTTCATGAAGC GCAGACATTTCTATGGTTGG
Downstream 100 bases:
>100_bases TCATGAGCTTTGGCTCACCGCTTATTGTTTTCAAAGTAATAATCATCAAATTATCGCCGCCGCCGTGCGGACGATCACCC AATGCCACGATCAAGCTCCG
Product: VanZ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MALLYTLAVFGLAWHNWTGSTTQPSLQLQIGATISAAFQQGGRAALINIIGNVAAFAPSGWLLAFWRPKLRLWLIGLIGL GLSCTVELGQYWLGYRVVDIDDVVLNSLGFSLAGSVARASQRLIQRCTREVDRGDSS
Sequences:
>Translated_137_residues MALLYTLAVFGLAWHNWTGSTTQPSLQLQIGATISAAFQQGGRAALINIIGNVAAFAPSGWLLAFWRPKLRLWLIGLIGL GLSCTVELGQYWLGYRVVDIDDVVLNSLGFSLAGSVARASQRLIQRCTREVDRGDSS >Mature_136_residues ALLYTLAVFGLAWHNWTGSTTQPSLQLQIGATISAAFQQGGRAALINIIGNVAAFAPSGWLLAFWRPKLRLWLIGLIGLG LSCTVELGQYWLGYRVVDIDDVVLNSLGFSLAGSVARASQRLIQRCTREVDRGDSS
Specific function: Unknown
COG id: COG4767
COG function: function code V; Glycopeptide antibiotics resistance protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14850; Mature: 14719
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLYTLAVFGLAWHNWTGSTTQPSLQLQIGATISAAFQQGGRAALINIIGNVAAFAPSG CHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHCCCCEEHHHHHHHHHHHCCCC WLLAFWRPKLRLWLIGLIGLGLSCTVELGQYWLGYRVVDIDDVVLNSLGFSLAGSVARAS CEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHCEEEECHHHHHHHHHCHHHHHHHHHHH QRLIQRCTREVDRGDSS HHHHHHHHHHHCCCCCC >Mature Secondary Structure ALLYTLAVFGLAWHNWTGSTTQPSLQLQIGATISAAFQQGGRAALINIIGNVAAFAPSG HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHCCCCEEHHHHHHHHHHHCCCC WLLAFWRPKLRLWLIGLIGLGLSCTVELGQYWLGYRVVDIDDVVLNSLGFSLAGSVARAS CEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHCEEEECHHHHHHHHHCHHHHHHHHHHH QRLIQRCTREVDRGDSS HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA