| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is celK [H]
Identifier: 159899165
GI number: 159899165
Start: 3394887
End: 3397325
Strand: Reverse
Name: celK [H]
Synonym: Haur_2646
Alternate gene names: 159899165
Gene position: 3397325-3394887 (Counterclockwise)
Preceding gene: 159899167
Following gene: 159899160
Centisome position: 53.53
GC content: 52.93
Gene sequence:
>2439_bases ATGACTGTTCATTTCCAACGGCGGAAACGATCACGCACGCTGATCGCAGCCTGTAGCACGGTTGCATTGACGGCAAGTGT GGCTTTTGGGAACATCTCCTCAGTGTTTGGGGTTATCCAACACGAATCCCGCAATACGACCCCGGCTAATCTCCCCGCCG CTGCGGTAGCAGCTTCCTCACTGATTCGGGTCAACCAACATGGCTATTTGCCCAACGCGATCAAACGCGCTAGCTTGGTC AATAGCAGTAACTCGCCTGTGGCATGGCAATTGCGCAATAGCTCTGGCACAACCGTACTTTCAGGCAATACCACGGTTTT TGGCTACGATGCCAGTTCTGGCGATACGATTCATATCATCGATTTTTCGGGCTACACTGGCACAGGCAGCAGCTTTACGT TAGCAGCGGCTGGCAATCTGAGCCATCAATTTGATATTAGCTCAACAGTGTATCGCCAATTAAAATACGATGCCCTCGCC TACTTCTACCATAATCGCAGCGGAATTGCGATCACCATGCCCTATGCTGGACGCAATGATCTGACTCGACCTGCTGGCCA CGTTGGCATCGCTCCCAACCGTGGCGATACCAATGTACCCTGTGCGCCTGGCACTGGCTGTAGCTATTCGCTGAATGTAG TTGGCGGCTGGTACGATGCTGGCGATCATGGCAAATATGTGGTCAATGGTGGGATTTCGGTCTGGACATTGCTTAACCAA TATGAGCGCAACCAATATTTAGGCTCGTCGGCAGCCGATTTTGGCGATGGCCGCATGAGTATTCCTGAAAATAGCAATGG TGTAGCCGATTTGCTCGACGAGGCGCGTTGGGAATTGGATTTTATGTTGCGCATGCAAGTGCCTGCTGGCCAACCACGGG CTGGCATGGTGCACCACAAAATGCACGATGCCAACTGGACTGGCATTCCACTGCGCCCCGATCAAGATTCACAGGATCGG GTATTACGCCCACCAAGCACCGCCGCAACCTTGAACTTGGCGGCAACTGCGGCCCAAGGCTCACGGATCTGGCGTTTCAT TGATCCAACGTATTCAGCACGTTTGCTGAGCGCTGCCGAAACTGCTTGGGCAGCGGCGCGGGCTAACCCCAACGTAATTG CTTTGGATAGCGATGGAACTGGCGGTGGTTCGTATGGCGATCCGCAAGTTGGCGATGAATTTTATTGGGCCGCCAGTGAA CTCTACATCACAACTGGCAAAGCCGAATACAAGAGCTATTTGCAAAGCTCAAGCTACTACCAAGATGTACCCAGCGATTA CAGCAGCCGCGAACCAGCCATGACGTGGGGCACAACCGAGGCACTTGGCACAATTTCGTTGGCGGTTGTACCCAGCGGTT TCAATAGCAGCGAACTGGCGGGCGTGCGCAATGCAGTGATCAGCGCAGCCACCGTGTTTGCCAATAACACCACTGGACAA GGCTATGGCACACCATTTAATTCAACCAGCACTGGTTATCCATGGGGTTCCAACTCGTTTGTCTTGAATAATGGCATTAT TTTGGGCTTGGCCCACGATTTCACTGGCAACGTGAGCTATCTCAATGCGATGAGCCAAGGTATGGATTATTTGCTGGGCC GCAATGCGATGGACAAATCGTATGTGACGGGCTATGGCGAAAACCCCTTGCAAAACCCGCATCACCGTTTCTGGGCCTTT CAAGCGAATAGTGGCTTTCCTCGCCCACCAGCTGGGGCAGTTTCAGGCGGCCCTAACTCGGCCTTGCAAGACCCTTATGC TCAAAGCATTGGCTTGCCTGGCTGCAACGCCCAAAAATGTTTCGTCGATCATATCGAATCGTGGTCAACCAACGAAATTA CCATCAACTGGAATGCACCATTAGCTTGGGTCGCCGCCTATTTAGATGAAAAGGCTGGTTCGGTAATACCACCGACGGCT ACGCCAATTCCGCCAACTGCGACTCCAATTCCGGCGACCGCCACGCCACGCCCAGCCACAGCTACGCCAATTCCGGCGAC GGCAACCCCGATTGGCCCAACCGCGACGGCTACGCCAATTGTGCCAACCGCCACGCCACGTCCAGCGACGGCAACTCCTG TGCCAACCAACACGCCAGTTGTGCCAACCCAAACGAACTCAAGTTGCCAAGTGACCTATACAATTTCTAACCAATGGCCA ACCGGCTTTACCGCCGATGTTGTGATCAAAAACAACGGTGCGGCGATCAATGGCTGGAACCTTGCTTGGACGTATGCTGG TAATCAATTTATTAGCAATTTGTGGAATGGCAATGTGAGCCAAGTTGGTCAAGCGGTCAATGTGACCAACGTCAATTGGA ATGGCTACTTAGGCACTGGGGCAACTGCTAGTTTTGGCATGCAAGCGAGCTTTAGTGGCACAAATGCCAAACCAACTGCT TTCAGCTTGAATGGTATCGCCTGTAGCGTTACGCCGTAA
Upstream 100 bases:
>100_bases TCCTAGATTGAAACCGATCCCAAATGCTGCTCTATTTAATTATGTTGAACTATTGCAGCAGATAATTGTCCTGTTGCAAT AGCCCAAAAAGGATCGACCA
Downstream 100 bases:
>100_bases GGTTTCTGCTATTCATCGATGATCATCAGAGGCACTACACCGCTCCACATGCATAATCCATGTGGAGCGGTTGGTTTGCT GTTAACGCGAATTAATTAAG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 812; Mature: 811
Protein sequence:
>812_residues MTVHFQRRKRSRTLIAACSTVALTASVAFGNISSVFGVIQHESRNTTPANLPAAAVAASSLIRVNQHGYLPNAIKRASLV NSSNSPVAWQLRNSSGTTVLSGNTTVFGYDASSGDTIHIIDFSGYTGTGSSFTLAAAGNLSHQFDISSTVYRQLKYDALA YFYHNRSGIAITMPYAGRNDLTRPAGHVGIAPNRGDTNVPCAPGTGCSYSLNVVGGWYDAGDHGKYVVNGGISVWTLLNQ YERNQYLGSSAADFGDGRMSIPENSNGVADLLDEARWELDFMLRMQVPAGQPRAGMVHHKMHDANWTGIPLRPDQDSQDR VLRPPSTAATLNLAATAAQGSRIWRFIDPTYSARLLSAAETAWAAARANPNVIALDSDGTGGGSYGDPQVGDEFYWAASE LYITTGKAEYKSYLQSSSYYQDVPSDYSSREPAMTWGTTEALGTISLAVVPSGFNSSELAGVRNAVISAATVFANNTTGQ GYGTPFNSTSTGYPWGSNSFVLNNGIILGLAHDFTGNVSYLNAMSQGMDYLLGRNAMDKSYVTGYGENPLQNPHHRFWAF QANSGFPRPPAGAVSGGPNSALQDPYAQSIGLPGCNAQKCFVDHIESWSTNEITINWNAPLAWVAAYLDEKAGSVIPPTA TPIPPTATPIPATATPRPATATPIPATATPIGPTATATPIVPTATPRPATATPVPTNTPVVPTQTNSSCQVTYTISNQWP TGFTADVVIKNNGAAINGWNLAWTYAGNQFISNLWNGNVSQVGQAVNVTNVNWNGYLGTGATASFGMQASFSGTNAKPTA FSLNGIACSVTP
Sequences:
>Translated_812_residues MTVHFQRRKRSRTLIAACSTVALTASVAFGNISSVFGVIQHESRNTTPANLPAAAVAASSLIRVNQHGYLPNAIKRASLV NSSNSPVAWQLRNSSGTTVLSGNTTVFGYDASSGDTIHIIDFSGYTGTGSSFTLAAAGNLSHQFDISSTVYRQLKYDALA YFYHNRSGIAITMPYAGRNDLTRPAGHVGIAPNRGDTNVPCAPGTGCSYSLNVVGGWYDAGDHGKYVVNGGISVWTLLNQ YERNQYLGSSAADFGDGRMSIPENSNGVADLLDEARWELDFMLRMQVPAGQPRAGMVHHKMHDANWTGIPLRPDQDSQDR VLRPPSTAATLNLAATAAQGSRIWRFIDPTYSARLLSAAETAWAAARANPNVIALDSDGTGGGSYGDPQVGDEFYWAASE LYITTGKAEYKSYLQSSSYYQDVPSDYSSREPAMTWGTTEALGTISLAVVPSGFNSSELAGVRNAVISAATVFANNTTGQ GYGTPFNSTSTGYPWGSNSFVLNNGIILGLAHDFTGNVSYLNAMSQGMDYLLGRNAMDKSYVTGYGENPLQNPHHRFWAF QANSGFPRPPAGAVSGGPNSALQDPYAQSIGLPGCNAQKCFVDHIESWSTNEITINWNAPLAWVAAYLDEKAGSVIPPTA TPIPPTATPIPATATPRPATATPIPATATPIGPTATATPIVPTATPRPATATPVPTNTPVVPTQTNSSCQVTYTISNQWP TGFTADVVIKNNGAAINGWNLAWTYAGNQFISNLWNGNVSQVGQAVNVTNVNWNGYLGTGATASFGMQASFSGTNAKPTA FSLNGIACSVTP >Mature_811_residues TVHFQRRKRSRTLIAACSTVALTASVAFGNISSVFGVIQHESRNTTPANLPAAAVAASSLIRVNQHGYLPNAIKRASLVN SSNSPVAWQLRNSSGTTVLSGNTTVFGYDASSGDTIHIIDFSGYTGTGSSFTLAAAGNLSHQFDISSTVYRQLKYDALAY FYHNRSGIAITMPYAGRNDLTRPAGHVGIAPNRGDTNVPCAPGTGCSYSLNVVGGWYDAGDHGKYVVNGGISVWTLLNQY ERNQYLGSSAADFGDGRMSIPENSNGVADLLDEARWELDFMLRMQVPAGQPRAGMVHHKMHDANWTGIPLRPDQDSQDRV LRPPSTAATLNLAATAAQGSRIWRFIDPTYSARLLSAAETAWAAARANPNVIALDSDGTGGGSYGDPQVGDEFYWAASEL YITTGKAEYKSYLQSSSYYQDVPSDYSSREPAMTWGTTEALGTISLAVVPSGFNSSELAGVRNAVISAATVFANNTTGQG YGTPFNSTSTGYPWGSNSFVLNNGIILGLAHDFTGNVSYLNAMSQGMDYLLGRNAMDKSYVTGYGENPLQNPHHRFWAFQ ANSGFPRPPAGAVSGGPNSALQDPYAQSIGLPGCNAQKCFVDHIESWSTNEITINWNAPLAWVAAYLDEKAGSVIPPTAT PIPPTATPIPATATPRPATATPIPATATPIGPTATATPIVPTATPRPATATPVPTNTPVVPTQTNSSCQVTYTISNQWPT GFTADVVIKNNGAAINGWNLAWTYAGNQFISNLWNGNVSQVGQAVNVTNVNWNGYLGTGATASFGMQASFSGTNAKPTAF SLNGIACSVTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 dockerin domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR016134 - InterPro: IPR002105 - InterPro: IPR003305 - InterPro: IPR018242 - InterPro: IPR008979 - InterPro: IPR001701 - InterPro: IPR018221 - InterPro: IPR004197 - InterPro: IPR013783 - InterPro: IPR014756 [H]
Pfam domain/function: PF02018 CBM_4_9; PF02927 CelD_N; PF00404 Dockerin_1; PF00759 Glyco_hydro_9 [H]
EC number: =3.2.1.91 [H]
Molecular weight: Translated: 85849; Mature: 85718
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS00592 GLYCOSYL_HYDROL_F9_1 ; PS00698 GLYCOSYL_HYDROL_F9_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVHFQRRKRSRTLIAACSTVALTASVAFGNISSVFGVIQHESRNTTPANLPAAAVAASS CCEECHHHHCCCEEEEEHHHEEEEEEEECCCHHHHHHHHEECCCCCCCCCCCHHHHHHHH LIRVNQHGYLPNAIKRASLVNSSNSPVAWQLRNSSGTTVLSGNTTVFGYDASSGDTIHII HEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCEEEEEEECCCCCEEEEE DFSGYTGTGSSFTLAAAGNLSHQFDISSTVYRQLKYDALAYFYHNRSGIAITMPYAGRND EECCCCCCCCCEEEEEECCCCEEECCHHHHHHHHHHCEEEEEEECCCCEEEEECCCCCCC LTRPAGHVGIAPNRGDTNVPCAPGTGCSYSLNVVGGWYDAGDHGKYVVNGGISVWTLLNQ CCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCCHHHHHHHH YERNQYLGSSAADFGDGRMSIPENSNGVADLLDEARWELDFMLRMQVPAGQPRAGMVHHK HHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEE MHDANWTGIPLRPDQDSQDRVLRPPSTAATLNLAATAAQGSRIWRFIDPTYSARLLSAAE ECCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHH TAWAAARANPNVIALDSDGTGGGSYGDPQVGDEFYWAASELYITTGKAEYKSYLQSSSYY HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEECHHHHHHHHHCCCHH QDVPSDYSSREPAMTWGTTEALGTISLAVVPSGFNSSELAGVRNAVISAATVFANNTTGQ HCCCCCCCCCCCCEECCCCHHCCEEEEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCCC GYGTPFNSTSTGYPWGSNSFVLNNGIILGLAHDFTGNVSYLNAMSQGMDYLLGRNAMDKS CCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC YVTGYGENPLQNPHHRFWAFQANSGFPRPPAGAVSGGPNSALQDPYAQSIGLPGCNAQKC CEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHH FVDHIESWSTNEITINWNAPLAWVAAYLDEKAGSVIPPTATPIPPTATPIPATATPRPAT HHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATPIPATATPIGPTATATPIVPTATPRPATATPVPTNTPVVPTQTNSSCQVTYTISNQWP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCC TGFTADVVIKNNGAAINGWNLAWTYAGNQFISNLWNGNVSQVGQAVNVTNVNWNGYLGTG CCCEEEEEEECCCCEEECCEEEEEECCHHHHHHHHCCCHHHHCCEEEEEEECCCCEECCC ATASFGMQASFSGTNAKPTAFSLNGIACSVTP CCCCCCEEEECCCCCCCCCEEEECCEEEEECC >Mature Secondary Structure TVHFQRRKRSRTLIAACSTVALTASVAFGNISSVFGVIQHESRNTTPANLPAAAVAASS CEECHHHHCCCEEEEEHHHEEEEEEEECCCHHHHHHHHEECCCCCCCCCCCHHHHHHHH LIRVNQHGYLPNAIKRASLVNSSNSPVAWQLRNSSGTTVLSGNTTVFGYDASSGDTIHII HEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCEEEEEEECCCCCEEEEE DFSGYTGTGSSFTLAAAGNLSHQFDISSTVYRQLKYDALAYFYHNRSGIAITMPYAGRND EECCCCCCCCCEEEEEECCCCEEECCHHHHHHHHHHCEEEEEEECCCCEEEEECCCCCCC LTRPAGHVGIAPNRGDTNVPCAPGTGCSYSLNVVGGWYDAGDHGKYVVNGGISVWTLLNQ CCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCCHHHHHHHH YERNQYLGSSAADFGDGRMSIPENSNGVADLLDEARWELDFMLRMQVPAGQPRAGMVHHK HHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEE MHDANWTGIPLRPDQDSQDRVLRPPSTAATLNLAATAAQGSRIWRFIDPTYSARLLSAAE ECCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHH TAWAAARANPNVIALDSDGTGGGSYGDPQVGDEFYWAASELYITTGKAEYKSYLQSSSYY HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEECHHHHHHHHHCCCHH QDVPSDYSSREPAMTWGTTEALGTISLAVVPSGFNSSELAGVRNAVISAATVFANNTTGQ HCCCCCCCCCCCCEECCCCHHCCEEEEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCCC GYGTPFNSTSTGYPWGSNSFVLNNGIILGLAHDFTGNVSYLNAMSQGMDYLLGRNAMDKS CCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC YVTGYGENPLQNPHHRFWAFQANSGFPRPPAGAVSGGPNSALQDPYAQSIGLPGCNAQKC CEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHH FVDHIESWSTNEITINWNAPLAWVAAYLDEKAGSVIPPTATPIPPTATPIPATATPRPAT HHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATPIPATATPIGPTATATPIVPTATPRPATATPVPTNTPVVPTQTNSSCQVTYTISNQWP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCC TGFTADVVIKNNGAAINGWNLAWTYAGNQFISNLWNGNVSQVGQAVNVTNVNWNGYLGTG CCCEEEEEEECCCCEEECCEEEEEECCHHHHHHHHCCCHHHHCCEEEEEEECCCCEECCC ATASFGMQASFSGTNAKPTAFSLNGIACSVTP CCCCCCEEEECCCCCCCCCEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA