| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yfcE [C]
Identifier: 159899126
GI number: 159899126
Start: 3347593
End: 3348099
Strand: Reverse
Name: yfcE [C]
Synonym: Haur_2607
Alternate gene names: 159899126
Gene position: 3348099-3347593 (Counterclockwise)
Preceding gene: 159899129
Following gene: 159899123
Centisome position: 52.75
GC content: 49.11
Gene sequence:
>507_bases ATGCAACGGATTTGTATTGTTTCAGATACCCATGGCAAGTTTGACCCACGGATCGAGCAGCTTTTTATAGGGGCAGCAGG GATTGTGCACGCAGGCGATATCGGACGAGCACAGCCACCAATCATCGAACGCTTGGGGGCGATTGCTCCGGTTACGGCGG TGACAGGCAACGTCGATTGGAATACTGCCCTCGATATTTACCCAATTAATACAACGCTTGAAGTGCAAGGCATTCGGATT ATGATCCAGCATATTGGCGATATTCCCAAACGCTGGTATCGCCAATTGCCGCAACCCTTGCCGCATGTGGTGATTTGTGG CCATAGCCATATCGCTTTAATCGAAGAATATCAAGGGGTCTTGTTTATCAATCCTGGTTCAGCTTCGCAGCCACGCGGCC AGCTCGGCGAGCCGACTGTGGCTTTCTTAGATATTCAGGAAAACGGTGAGTTTCACGCTGAAATTATTCCGCTCAAAATG GCCGAATTTATCAAACATGCCGATTAA
Upstream 100 bases:
>100_bases ATCAAATGACAGATGTCAATATCTGTCATTGCATTTTAGTAAGCTATTTTGAGCTATGCTATGATAATTACGATTCTTGT GGATTGTGGTGAGGCACGCG
Downstream 100 bases:
>100_bases ACAGCAATCCCCTCACCAAATCAATGGCGAGGGGATTTGCTTTACCAAGCGAGCTTATTCGTGACGCAATGCCTTGATTG GGTCAAGGCGGGCGGCACGT
Product: phosphodiesterase
Products: NA
Alternate protein names: Phosphoesterase; Phosphoesterase Subfamily; Metallophosphoesterase Superfamily Protein; Calcineurin-Like Phosphoesterase; Metallophosphoesterase; Phosphoesterase YfcE; Phosphodiesterase Family Protein; Phosphoesterase Protein
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MQRICIVSDTHGKFDPRIEQLFIGAAGIVHAGDIGRAQPPIIERLGAIAPVTAVTGNVDWNTALDIYPINTTLEVQGIRI MIQHIGDIPKRWYRQLPQPLPHVVICGHSHIALIEEYQGVLFINPGSASQPRGQLGEPTVAFLDIQENGEFHAEIIPLKM AEFIKHAD
Sequences:
>Translated_168_residues MQRICIVSDTHGKFDPRIEQLFIGAAGIVHAGDIGRAQPPIIERLGAIAPVTAVTGNVDWNTALDIYPINTTLEVQGIRI MIQHIGDIPKRWYRQLPQPLPHVVICGHSHIALIEEYQGVLFINPGSASQPRGQLGEPTVAFLDIQENGEFHAEIIPLKM AEFIKHAD >Mature_168_residues MQRICIVSDTHGKFDPRIEQLFIGAAGIVHAGDIGRAQPPIIERLGAIAPVTAVTGNVDWNTALDIYPINTTLEVQGIRI MIQHIGDIPKRWYRQLPQPLPHVVICGHSHIALIEEYQGVLFINPGSASQPRGQLGEPTVAFLDIQENGEFHAEIIPLKM AEFIKHAD
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18536; Mature: 18536
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRICIVSDTHGKFDPRIEQLFIGAAGIVHAGDIGRAQPPIIERLGAIAPVTAVTGNVDW CCEEEEEECCCCCCCCCHHHEEECCCCEEECCCCCCCCCHHHHHHCCCCCEEEEECCCCC NTALDIYPINTTLEVQGIRIMIQHIGDIPKRWYRQLPQPLPHVVICGHSHIALIEEYQGV CCEEEEEECCCEEEECHHHHEEHHHCCCHHHHHHHCCCCCCEEEEECCCCEEEEECCCCE LFINPGSASQPRGQLGEPTVAFLDIQENGEFHAEIIPLKMAEFIKHAD EEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECHHHHHHHHCCC >Mature Secondary Structure MQRICIVSDTHGKFDPRIEQLFIGAAGIVHAGDIGRAQPPIIERLGAIAPVTAVTGNVDW CCEEEEEECCCCCCCCCHHHEEECCCCEEECCCCCCCCCHHHHHHCCCCCEEEEECCCCC NTALDIYPINTTLEVQGIRIMIQHIGDIPKRWYRQLPQPLPHVVICGHSHIALIEEYQGV CCEEEEEECCCEEEECHHHHEEHHHCCCHHHHHHHCCCCCCEEEEECCCCEEEEECCCCE LFINPGSASQPRGQLGEPTVAFLDIQENGEFHAEIIPLKMAEFIKHAD EEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA