| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899117
Identifier: 159899117
GI number: 159899117
Start: 3333092
End: 3333589
Strand: Reverse
Name: 159899117
Synonym: Haur_2598
Alternate gene names: NA
Gene position: 3333589-3333092 (Counterclockwise)
Preceding gene: 159899121
Following gene: 159899116
Centisome position: 52.53
GC content: 46.39
Gene sequence:
>498_bases ATGGCCGATTCATTATTTGATCCAGAACGTGATCCCTTTGCAGATATGCGCAATGCTTTAGAAACCGCGCAACGTGAACG CAAAAATATTCTAGTTGAGCTTGGCGGTGATTGGTGTGTGTGGTGTCATCGCTTAGAGGCGTTTATCAATGCCCACCCCC AATTACGCTATTTACGCGATATTCATTATGTTAAAGTCAAGGTTTTAGTGGGCGATGAGCAACAAAAAAATAAAACTTTT TTAGAGCACTTACCAGGTTTCGATGGGGTTCCGCATATTTTTATCTACAATAGTCGTGGCCAATTGCTTTGCTCGCAAGA TACCAGCCCACTCGAAGAAGGCGAGAGCTATAACTTTGGGCGGGTACGCGATTTTCTGAGTCGTTGGTCGGAATGGCGGC TCTCGCCCTATGATGCCTTGGCAACCGACGAACTCAAACGCCTGGTCGAGCTGCATTACTTTGGCGAATATGCCAACCAA ATTACCCCTAGCGCCTAA
Upstream 100 bases:
>100_bases AAACCGCTATAATAAGGGGAGCTTGAAGGTGCTGTTGATCGTTGCGCCCCGAGAGCAACCGCAAAGCAAGCCCAAAATCA CAACTGTTGAGGACTATTCC
Downstream 100 bases:
>100_bases ATAAGCCCGATTAATTGACGAATGCGAGGGCTTGTTCTACCATGCGCCGCGCAAAGGAGTTTATATGCGTGTGTTGATCC TTGGGGCAAGCGGCCAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MADSLFDPERDPFADMRNALETAQRERKNILVELGGDWCVWCHRLEAFINAHPQLRYLRDIHYVKVKVLVGDEQQKNKTF LEHLPGFDGVPHIFIYNSRGQLLCSQDTSPLEEGESYNFGRVRDFLSRWSEWRLSPYDALATDELKRLVELHYFGEYANQ ITPSA
Sequences:
>Translated_165_residues MADSLFDPERDPFADMRNALETAQRERKNILVELGGDWCVWCHRLEAFINAHPQLRYLRDIHYVKVKVLVGDEQQKNKTF LEHLPGFDGVPHIFIYNSRGQLLCSQDTSPLEEGESYNFGRVRDFLSRWSEWRLSPYDALATDELKRLVELHYFGEYANQ ITPSA >Mature_164_residues ADSLFDPERDPFADMRNALETAQRERKNILVELGGDWCVWCHRLEAFINAHPQLRYLRDIHYVKVKVLVGDEQQKNKTFL EHLPGFDGVPHIFIYNSRGQLLCSQDTSPLEEGESYNFGRVRDFLSRWSEWRLSPYDALATDELKRLVELHYFGEYANQI TPSA
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19320; Mature: 19189
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSLFDPERDPFADMRNALETAQRERKNILVELGGDWCVWCHRLEAFINAHPQLRYLRD CCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHH IHYVKVKVLVGDEQQKNKTFLEHLPGFDGVPHIFIYNSRGQLLCSQDTSPLEEGESYNFG HEEEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCHH RVRDFLSRWSEWRLSPYDALATDELKRLVELHYFGEYANQITPSA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADSLFDPERDPFADMRNALETAQRERKNILVELGGDWCVWCHRLEAFINAHPQLRYLRD CCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHH IHYVKVKVLVGDEQQKNKTFLEHLPGFDGVPHIFIYNSRGQLLCSQDTSPLEEGESYNFG HEEEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCHH RVRDFLSRWSEWRLSPYDALATDELKRLVELHYFGEYANQITPSA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA