Click here to switch to the map view.

The map label for this gene is ybgI [C]

Identifier: 159899090

GI number: 159899090

Start: 3295710

End: 3296471

Strand: Reverse

Name: ybgI [C]

Synonym: Haur_2571

Alternate gene names: 159899090

Gene position: 3296471-3295710 (Counterclockwise)

Preceding gene: 159899091

Following gene: 159899089

Centisome position: 51.94

GC content: 49.61

Gene sequence:

>762_bases
ATGCAACTAACAGAGTTGGTGCGCTATTTGGATAGCTATTTGCAAACCGCCAAATTTCGCGATGCAAGCTTAAATGGCTT
GCAAGTTGAAGGGCGTGACGAGGTTAAAACCATCGCGCTGGCGGTTGATGCTTCGTTGCAGGCGATTGAAGCAGCAATTG
CTGGCAATGCCGATTTGTTGCTGACCCATCATGGCTTGTTTTGGGGCAATGCTCAGCCCTTAGTTGGCTGGCTTGGGCGA
CGAATCAAACGCTTGATGGCAGCTGATTGTTCGCTGTATACCTCGCATTTGCCGCTTGATGCTCATGGCGAAGTTGGCAA
TAATGCCCAATTACTCAAGCTTCTAGGTTGGGAAATGGTTCAGCCATTTGGCGATTATCGTGGCCAAATGTTGGGCTTTA
TCGGCCAACTAACCACGCCATTAAGTATTGAAGGCTTAGTTGCCCATGTCAAAAGCACCTTGGCAATTCCCGAAAACGAG
ATCAAAGTTTGGGGTCAAACATCGCGTGGAATTAAACGGGTTGGGGTCGTTTCGGGCGATGGGGCCAGCGAATTGGAGCA
AGCGCTGCGTGATGGCTGCGATGCCTTGCTGACTGGCGAAGTTAATTATGCAGCGGTTTTTCCCTCGATCGAGGCCGATA
TGCCCTTGATTTGTGCCGGCCATTATCACACTGAAACGTTGGGTGTTAAGGCATTGGGCGCACATCTAGAGCAAACTTTT
CGGGTAAAAACCTTCTTTGTTGATGTGCCAACTGGGGTCTAA

Upstream 100 bases:

>100_bases
TTGGCTGGCTTTTATGGCCAATTCGTTGGTTGTTTGGCTTGTTGTTTGCGCCATTTCGCCAACGGGTTGCTGCTCGCATG
CAAGGTGAATAGGAGCAATC

Downstream 100 bases:

>100_bases
ACTGCTGCAACTTGTGATCATGTGGCAACGTTAAACCAACCCATGGCCTAAGGCTTGCGGAAGGTAGCATTTGAGCTGTA
TTTCCGCTAGAATAGGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MQLTELVRYLDSYLQTAKFRDASLNGLQVEGRDEVKTIALAVDASLQAIEAAIAGNADLLLTHHGLFWGNAQPLVGWLGR
RIKRLMAADCSLYTSHLPLDAHGEVGNNAQLLKLLGWEMVQPFGDYRGQMLGFIGQLTTPLSIEGLVAHVKSTLAIPENE
IKVWGQTSRGIKRVGVVSGDGASELEQALRDGCDALLTGEVNYAAVFPSIEADMPLICAGHYHTETLGVKALGAHLEQTF
RVKTFFVDVPTGV

Sequences:

>Translated_253_residues
MQLTELVRYLDSYLQTAKFRDASLNGLQVEGRDEVKTIALAVDASLQAIEAAIAGNADLLLTHHGLFWGNAQPLVGWLGR
RIKRLMAADCSLYTSHLPLDAHGEVGNNAQLLKLLGWEMVQPFGDYRGQMLGFIGQLTTPLSIEGLVAHVKSTLAIPENE
IKVWGQTSRGIKRVGVVSGDGASELEQALRDGCDALLTGEVNYAAVFPSIEADMPLICAGHYHTETLGVKALGAHLEQTF
RVKTFFVDVPTGV
>Mature_253_residues
MQLTELVRYLDSYLQTAKFRDASLNGLQVEGRDEVKTIALAVDASLQAIEAAIAGNADLLLTHHGLFWGNAQPLVGWLGR
RIKRLMAADCSLYTSHLPLDAHGEVGNNAQLLKLLGWEMVQPFGDYRGQMLGFIGQLTTPLSIEGLVAHVKSTLAIPENE
IKVWGQTSRGIKRVGVVSGDGASELEQALRDGCDALLTGEVNYAAVFPSIEADMPLICAGHYHTETLGVKALGAHLEQTF
RVKTFFVDVPTGV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=265, Percent_Identity=33.9622641509434, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27394; Mature: 27394

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTELVRYLDSYLQTAKFRDASLNGLQVEGRDEVKTIALAVDASLQAIEAAIAGNADLL
CCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHEEEEEEECHHHHHHHHHHCCCCEEE
LTHHGLFWGNAQPLVGWLGRRIKRLMAADCSLYTSHLPLDAHGEVGNNAQLLKLLGWEMV
EEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
QPFGDYRGQMLGFIGQLTTPLSIEGLVAHVKSTLAIPENEIKVWGQTSRGIKRVGVVSGD
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCC
GASELEQALRDGCDALLTGEVNYAAVFPSIEADMPLICAGHYHTETLGVKALGAHLEQTF
CHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHE
RVKTFFVDVPTGV
EEEEEEEECCCCC
>Mature Secondary Structure
MQLTELVRYLDSYLQTAKFRDASLNGLQVEGRDEVKTIALAVDASLQAIEAAIAGNADLL
CCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHEEEEEEECHHHHHHHHHHCCCCEEE
LTHHGLFWGNAQPLVGWLGRRIKRLMAADCSLYTSHLPLDAHGEVGNNAQLLKLLGWEMV
EEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
QPFGDYRGQMLGFIGQLTTPLSIEGLVAHVKSTLAIPENEIKVWGQTSRGIKRVGVVSGD
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCC
GASELEQALRDGCDALLTGEVNYAAVFPSIEADMPLICAGHYHTETLGVKALGAHLEQTF
CHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHE
RVKTFFVDVPTGV
EEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]