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The map label for this gene is ybhR [H]

Identifier: 159899070

GI number: 159899070

Start: 3279090

End: 3280616

Strand: Direct

Name: ybhR [H]

Synonym: Haur_2551

Alternate gene names: 159899070

Gene position: 3279090-3280616 (Clockwise)

Preceding gene: 159899069

Following gene: 159899071

Centisome position: 51.67

GC content: 48.0

Gene sequence:

>1527_bases
ATGCTTAAAGATTTAGTACGCATTTTTGCGTTCTGTGCCAAAGAATTAAATGCAATCCGGCGACAACCCTTGCTTTTAGT
TGGCTTGATCATCGGGCCATTTCTGATTCTCTCATTGTTTGGAGTTGGCTATCAAGGTGAGCAACCAAAATTGCGCACGG
GCATCGTTGTACCGCCAGGCCATCGCGACGATCCCCAAGTAACTGAATTGATCAAGCGCATCAGCAATACTTTTGTGATC
GATGCGGAGCGGCATATTTATGAGAGTGAGGAGCCAGCCGTCGCGGCGCTCAACAACGACGAGCTAGATTTGGTCGAAAT
TTTCCCATTGGAGATGACCACGGTCTACTCTACGGGCAAGGCGGTTGATATTCGCTTTATCTATAGCGAAGTTGACCCAT
TGCTACGCTCGTGGATCGAATATCTCTCGTATACCCAAATTAACGAATTGAACAAAGGCATGTTGTTTAGCGTGGTTGGC
CAGAGTCAGCAGCAAATTGGCACATTACGCGATTATGTCAGCGATGCACGCCAGCAAATTAGCCAATTGCGCGAACAACT
CAATAGCAACAAACGTGACGAAGCTCGCCAAACTATCAAAACATTACGCGAATCGGGAGCCTTGCAATTAATTGCCTTAT
CGATGACCCAAAATGGAGCCAGCGAAACCAGTAGTTCAACCCAAAGCCTTAGCTCATTCCAAGCTTCGCTTGATGGGCTT
GATCGCGATTTGGCCGCAGGCGGAACCTTGGAGCAGCAAGATCAAAAATTAGCCGAGCTTGATACGCGGCTCGGCGAACT
TGATCAACAGGCTGATCGGGTACAAACAATCGATCCAGCGGTGGTTGTTTCACCATTACGCTCGGTGGCTAGCAACCTTG
CACCAATCGAAAGCCTTGGCGATATCACCAAAGATCCCGCGACCGCCTATGTACGTTTTTATACCCCAGCGGTGCTAGCA
CTCTTGCTGCAACATATGATGGTGACCTTGGCAGGATTATCGCTAGTGCGTGAGTTGCAACAAGGCACGTTGGAGATGTT
TCGGGTCTCGCCACTTTCGGCCTTTCAAACCTTGGTTGGCAAATATGCCAGCTACACGATTTTATCGGCAGTCATTGTCA
GTGTTTTGGTCTCGTTAATGGTCTTTGGATTGGGCGTGCCCTTTTACACAGGCCAATTGCTCAATTTTGCCTTGTTGACA
TTTATGTTGACCATCGCATCGCTTGGCATTGGCTTTTTGATCTCGTCGGTAGTCAGCACCGATAGCCAAGCGGTACAATT
CTCGATGTTGGTATTGTTGATGTCGGTGTTCTTCAGCGGTTTCTTCATCTCGCTAAAATCGTTTTTGCCGTTTGTGCAGA
ATATTGCCCGCGGCTTGCCCGTTACCCATGGCATCGCCAATTATCAACAAATTATGTTGCTCAACCGTGCACCCGAGGCC
AGCACCTATATCTGGCTTGGTGGAATAGCCTTGGTATCCTTTTTGCTTAGTTGGTTGATATTCGGTCGTCAATTTCAACG
CAAATAG

Upstream 100 bases:

>100_bases
ATCGATACGCGCCAAGTTGGTGAATATAATCCGCCATTCGACGATATTTTTATTACCTTGATGGAGCGGCTTGAGCAACC
AGAGAGCAAGGAGCAGATCA

Downstream 100 bases:

>100_bases
CGACACCGTTTATCAAGCACATAAGTTGGAGGAACCGCAATGTTTAGACATTTCTTCAAAACGATCTGGATGGCTGCCAA
ATATTTTCTGTTAGGGCTAG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MLKDLVRIFAFCAKELNAIRRQPLLLVGLIIGPFLILSLFGVGYQGEQPKLRTGIVVPPGHRDDPQVTELIKRISNTFVI
DAERHIYESEEPAVAALNNDELDLVEIFPLEMTTVYSTGKAVDIRFIYSEVDPLLRSWIEYLSYTQINELNKGMLFSVVG
QSQQQIGTLRDYVSDARQQISQLREQLNSNKRDEARQTIKTLRESGALQLIALSMTQNGASETSSSTQSLSSFQASLDGL
DRDLAAGGTLEQQDQKLAELDTRLGELDQQADRVQTIDPAVVVSPLRSVASNLAPIESLGDITKDPATAYVRFYTPAVLA
LLLQHMMVTLAGLSLVRELQQGTLEMFRVSPLSAFQTLVGKYASYTILSAVIVSVLVSLMVFGLGVPFYTGQLLNFALLT
FMLTIASLGIGFLISSVVSTDSQAVQFSMLVLLMSVFFSGFFISLKSFLPFVQNIARGLPVTHGIANYQQIMLLNRAPEA
STYIWLGGIALVSFLLSWLIFGRQFQRK

Sequences:

>Translated_508_residues
MLKDLVRIFAFCAKELNAIRRQPLLLVGLIIGPFLILSLFGVGYQGEQPKLRTGIVVPPGHRDDPQVTELIKRISNTFVI
DAERHIYESEEPAVAALNNDELDLVEIFPLEMTTVYSTGKAVDIRFIYSEVDPLLRSWIEYLSYTQINELNKGMLFSVVG
QSQQQIGTLRDYVSDARQQISQLREQLNSNKRDEARQTIKTLRESGALQLIALSMTQNGASETSSSTQSLSSFQASLDGL
DRDLAAGGTLEQQDQKLAELDTRLGELDQQADRVQTIDPAVVVSPLRSVASNLAPIESLGDITKDPATAYVRFYTPAVLA
LLLQHMMVTLAGLSLVRELQQGTLEMFRVSPLSAFQTLVGKYASYTILSAVIVSVLVSLMVFGLGVPFYTGQLLNFALLT
FMLTIASLGIGFLISSVVSTDSQAVQFSMLVLLMSVFFSGFFISLKSFLPFVQNIARGLPVTHGIANYQQIMLLNRAPEA
STYIWLGGIALVSFLLSWLIFGRQFQRK
>Mature_508_residues
MLKDLVRIFAFCAKELNAIRRQPLLLVGLIIGPFLILSLFGVGYQGEQPKLRTGIVVPPGHRDDPQVTELIKRISNTFVI
DAERHIYESEEPAVAALNNDELDLVEIFPLEMTTVYSTGKAVDIRFIYSEVDPLLRSWIEYLSYTQINELNKGMLFSVVG
QSQQQIGTLRDYVSDARQQISQLREQLNSNKRDEARQTIKTLRESGALQLIALSMTQNGASETSSSTQSLSSFQASLDGL
DRDLAAGGTLEQQDQKLAELDTRLGELDQQADRVQTIDPAVVVSPLRSVASNLAPIESLGDITKDPATAYVRFYTPAVLA
LLLQHMMVTLAGLSLVRELQQGTLEMFRVSPLSAFQTLVGKYASYTILSAVIVSVLVSLMVFGLGVPFYTGQLLNFALLT
FMLTIASLGIGFLISSVVSTDSQAVQFSMLVLLMSVFFSGFFISLKSFLPFVQNIARGLPVTHGIANYQQIMLLNRAPEA
STYIWLGGIALVSFLLSWLIFGRQFQRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=169, Percent_Identity=26.6272189349112, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787011, Length=177, Percent_Identity=26.5536723163842, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 56168; Mature: 56168

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDLVRIFAFCAKELNAIRRQPLLLVGLIIGPFLILSLFGVGYQGEQPKLRTGIVVPPG
CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCC
HRDDPQVTELIKRISNTFVIDAERHIYESEEPAVAALNNDELDLVEIFPLEMTTVYSTGK
CCCCCHHHHHHHHHCCCEEEECHHHHCCCCCCCEEEECCCCCCEEEEECCHHHHEECCCC
AVDIRFIYSEVDPLLRSWIEYLSYTQINELNKGMLFSVVGQSQQQIGTLRDYVSDARQQI
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
SQLREQLNSNKRDEARQTIKTLRESGALQLIALSMTQNGASETSSSTQSLSSFQASLDGL
HHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
DRDLAAGGTLEQQDQKLAELDTRLGELDQQADRVQTIDPAVVVSPLRSVASNLAPIESLG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
DITKDPATAYVRFYTPAVLALLLQHMMVTLAGLSLVRELQQGTLEMFRVSPLSAFQTLVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KYASYTILSAVIVSVLVSLMVFGLGVPFYTGQLLNFALLTFMLTIASLGIGFLISSVVST
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DSQAVQFSMLVLLMSVFFSGFFISLKSFLPFVQNIARGLPVTHGIANYQQIMLLNRAPEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
STYIWLGGIALVSFLLSWLIFGRQFQRK
CCEEEEHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKDLVRIFAFCAKELNAIRRQPLLLVGLIIGPFLILSLFGVGYQGEQPKLRTGIVVPPG
CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCC
HRDDPQVTELIKRISNTFVIDAERHIYESEEPAVAALNNDELDLVEIFPLEMTTVYSTGK
CCCCCHHHHHHHHHCCCEEEECHHHHCCCCCCCEEEECCCCCCEEEEECCHHHHEECCCC
AVDIRFIYSEVDPLLRSWIEYLSYTQINELNKGMLFSVVGQSQQQIGTLRDYVSDARQQI
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
SQLREQLNSNKRDEARQTIKTLRESGALQLIALSMTQNGASETSSSTQSLSSFQASLDGL
HHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
DRDLAAGGTLEQQDQKLAELDTRLGELDQQADRVQTIDPAVVVSPLRSVASNLAPIESLG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
DITKDPATAYVRFYTPAVLALLLQHMMVTLAGLSLVRELQQGTLEMFRVSPLSAFQTLVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KYASYTILSAVIVSVLVSLMVFGLGVPFYTGQLLNFALLTFMLTIASLGIGFLISSVVST
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DSQAVQFSMLVLLMSVFFSGFFISLKSFLPFVQNIARGLPVTHGIANYQQIMLLNRAPEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
STYIWLGGIALVSFLLSWLIFGRQFQRK
CCEEEEHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]