| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899055
Identifier: 159899055
GI number: 159899055
Start: 3241940
End: 3242452
Strand: Reverse
Name: 159899055
Synonym: Haur_2536
Alternate gene names: NA
Gene position: 3242452-3241940 (Counterclockwise)
Preceding gene: 159899056
Following gene: 159899054
Centisome position: 51.09
GC content: 49.9
Gene sequence:
>513_bases ATGCGCTTAACTGAACAATTACGCCAAGTTGGGCGTTGGCTGAGTATTGCTGGTGCTGTTTTGATCGCGCTTGGCCTGCT GTTTCTTGGCTCGGAAATTAGCCAATTTGGCTTTAAGCTGAATGATTTGCTGGGCATGCTGGCGATTGGCGTGGTCATTC CAGTTGGAATTTATGTTTACCAAACCAAGATTAATTGGCGTAAACTGCGCGAACGCTTGCTGAAGGCTGAGACTGCCCGC GATTTTCAGCCTTTGCCAACACTTAAACCATTACCAATTTGGGTCTGGGCAATTTGGGCATTCTTGGCTTTTGCCAGCGG CTATACCTTTGGTGGCGCATTTACGATCTTCTTTGGGGCGTTTTTGCTGGGTTTTGGCTTGGCTAACCCGACCTTGGCCA AGCAGGTTGAGCAGTTAGAAGCTGGACGAGCTTTGTTCTATGGCCAACGCGATTTGCGAGGCCGCCCGATAGTGGTCCGA GTTTTGCCTGAAATGCTCTTGGCACGCGATTGA
Upstream 100 bases:
>100_bases CTATCCACAGGCCAATATTGGCTTGCTCGAACAGGTTGCCAGCAAAGTTTACGAAGCCGATAGCTGGATCATCTATCAAG TACAACCATAGGAGCAGACG
Downstream 100 bases:
>100_bases CGCAACGAGTATAATTAAAGCTCAATTCATGCCAATGAGGTCTCCATGCGATCTGATTCCGCTTCATACCGTTATGGCGA ACATCGCATTTATTTGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRLTEQLRQVGRWLSIAGAVLIALGLLFLGSEISQFGFKLNDLLGMLAIGVVIPVGIYVYQTKINWRKLRERLLKAETAR DFQPLPTLKPLPIWVWAIWAFLAFASGYTFGGAFTIFFGAFLLGFGLANPTLAKQVEQLEAGRALFYGQRDLRGRPIVVR VLPEMLLARD
Sequences:
>Translated_170_residues MRLTEQLRQVGRWLSIAGAVLIALGLLFLGSEISQFGFKLNDLLGMLAIGVVIPVGIYVYQTKINWRKLRERLLKAETAR DFQPLPTLKPLPIWVWAIWAFLAFASGYTFGGAFTIFFGAFLLGFGLANPTLAKQVEQLEAGRALFYGQRDLRGRPIVVR VLPEMLLARD >Mature_170_residues MRLTEQLRQVGRWLSIAGAVLIALGLLFLGSEISQFGFKLNDLLGMLAIGVVIPVGIYVYQTKINWRKLRERLLKAETAR DFQPLPTLKPLPIWVWAIWAFLAFASGYTFGGAFTIFFGAFLLGFGLANPTLAKQVEQLEAGRALFYGQRDLRGRPIVVR VLPEMLLARD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19068; Mature: 19068
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTEQLRQVGRWLSIAGAVLIALGLLFLGSEISQFGFKLNDLLGMLAIGVVIPVGIYVY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHE QTKINWRKLRERLLKAETARDFQPLPTLKPLPIWVWAIWAFLAFASGYTFGGAFTIFFGA ECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH FLLGFGLANPTLAKQVEQLEAGRALFYGQRDLRGRPIVVRVLPEMLLARD HHHHHCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRLTEQLRQVGRWLSIAGAVLIALGLLFLGSEISQFGFKLNDLLGMLAIGVVIPVGIYVY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHE QTKINWRKLRERLLKAETARDFQPLPTLKPLPIWVWAIWAFLAFASGYTFGGAFTIFFGA ECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH FLLGFGLANPTLAKQVEQLEAGRALFYGQRDLRGRPIVVRVLPEMLLARD HHHHHCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA