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The map label for this gene is cenD [H]

Identifier: 159899031

GI number: 159899031

Start: 3208455

End: 3210368

Strand: Direct

Name: cenD [H]

Synonym: Haur_2512

Alternate gene names: 159899031

Gene position: 3208455-3210368 (Clockwise)

Preceding gene: 159899029

Following gene: 159899032

Centisome position: 50.55

GC content: 52.72

Gene sequence:

>1914_bases
ATGAAAGTTTATAAGCCAATGCTCAAATTCATTGCAGCTTTTTTGGTCTTTTTACCGCTCGTCACCAGTGCTGCCAGCAG
CACCGAGCACTTTAATCAACCAATCAGTAGTTCCAGTATGTTTAGCTGGTACACCAACTCCAGCACCGCCACGGGTACAG
CCAACGTCAGCGATAGCCAAGCCCAAGATGGCAAGATTCTGCGGCTTTCAATTGCTGCTGGACAAACTGCTTACCCAGGT
CAAGGCTCAAACTTGGTTTCACGCCAAATGTATCATTATGGCACGTATGAAGCCCGCATGAAAACCGCCAACTGCGCCAG
CGACGAAGGCGTAATCAATGGTTTCTTTACCTATTTCAACGATGGCAGCGATAGTAACGCCAACGGCTTGCCCGATAACA
GCGAAATTGATTTTGAATGGCTCTGCGCCGAACCCCAATCAATCTTGATGACGATCTGGACCGATTACAACGATCCAACT
GCGATCAGTCGGCGGGTCTATCGCAAGGTCAATTTGGCAACTGGCACGATCGAATATACCCGCTATGCCACAACCTTCGG
CGATAGCTACACCGATTTGTCGAATAGCCCAAGCGAAAATCAACCAACGGCAGTACAGGCGATTTCAGGCTACAATTCAG
CCACCAACTACTATGAATATGGCTTCAATTGGACTGCCAGCAATGTCACCTTGTGGGTGGTGAATCCTAGCAACGGCCAA
AAAATTGTACTCTGGGATTATCGCGGGCCAAGCGCACGGATTCCCAAAAATCCAGCAGCCTTTATGGTCAATTTGTGGCA
TCACCCCAATTGGACACCCGAATGCTGTGCGAACGCCACCAATCCACCACGAGCCACTCGTTCGATGGATGTTGATTGGC
TGCGGTTCACGCCACAAAGCGATATCCCCAGTGATACGACCGCGCCAAGTGCTCCCAGCAATTTGCAAGCACCCAGCAAA
ACCCACAACAGCGTGAATTTAAGTTGGAACACCGCCACCGATAATGTTGGCGTAGTGGGCTACGATATTTATCAGAATGG
CGGGGCCAATCCCGTTGCCAGCACCAGCAGCACCACCATCACGATCAGCGGGCTGAATCCCAGCACTGCCTATAGTTTTG
CGGTCAAAGCGCGTGATGCCGCTGACAATCGCTCGGCCAACAGCAACAGCCTGAGCGTCAGCACCAACAACCAGCCAACC
ACAGGCAACGGTTTACAAGCAAGCTTCGTCAAAACCTCAGATTGGGGCAACGGCTACGTGGGAGTCTATCGGATTACCAA
CAATGGCAGCAGCGCCGTCGATGGCTGGACGTTGGGCTTTGACTTACCGAGCAATGCCACGATTTCAAGCTGGTGGGATG
CGACTCAAGCCAAGAGCGGCAATCGCTACACCGCTGGCAATCTCGCATGGAACCGCCGAATCGAGGTTGGCCAAACTCGC
GAATTTGGCTTCAGCGGAAGCTACAGCGGCGCATGGGTCAATCCTAGCAACTGCACGATCAACGGCCAAGCCTGTAGTGG
CGGCACAACCAGCACCAACGTGGCGCTTGGTCGGCCAGTTCAGGTTTCCTCGGTCGAAACCAGCGCTTTGGGTGGAGCCA
ATGCCACCGATGGCAACAACGCTACCCGTTGGGCCAGCAGCTACAGCGATCCTCAATGGATTCAGGTTGACTTGGGCAGC
AGCAAAAGCTTGACCAAAGTTGTGTTAAATTGGGAAGCAGCCTATGCCCGAGCCTATCAAGTGCAAGTTTCTGATGATGC
GAGTACCTGGCGCACCCTGAGCACGGTCAGCAACGGCGATGGTGGCACTGATACACTCAATATCACTGGCAGCGGACGTT
ATGTACGAATTTACGCAACCCAACGCGGTACCGAATGGGGTTACTCGTTGTGGGAAATCGCCGCCTATAACTAG

Upstream 100 bases:

>100_bases
TAGGTACGCAGGTTTTGGTCTAATGAGCTTGCTAGTCAACGAAGGAGGTCAGGGACGAAACAAGCCGAGCTTCAAACCGC
AATCTAGTACGGGGTACAAC

Downstream 100 bases:

>100_bases
GGAGCGTCTGGCAACAACTCCCATGTTCAATCCCCTAGCTCTGATTCGAGCTAGGGGATTTTTGATACCTAAAGACGTGA
GAGCAAGCTGAGATTGCTTT

Product: cellulose-binding family II protein

Products: NA

Alternate protein names: Cellulase D; Endo-1,4-beta-glucanase D [H]

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MKVYKPMLKFIAAFLVFLPLVTSAASSTEHFNQPISSSSMFSWYTNSSTATGTANVSDSQAQDGKILRLSIAAGQTAYPG
QGSNLVSRQMYHYGTYEARMKTANCASDEGVINGFFTYFNDGSDSNANGLPDNSEIDFEWLCAEPQSILMTIWTDYNDPT
AISRRVYRKVNLATGTIEYTRYATTFGDSYTDLSNSPSENQPTAVQAISGYNSATNYYEYGFNWTASNVTLWVVNPSNGQ
KIVLWDYRGPSARIPKNPAAFMVNLWHHPNWTPECCANATNPPRATRSMDVDWLRFTPQSDIPSDTTAPSAPSNLQAPSK
THNSVNLSWNTATDNVGVVGYDIYQNGGANPVASTSSTTITISGLNPSTAYSFAVKARDAADNRSANSNSLSVSTNNQPT
TGNGLQASFVKTSDWGNGYVGVYRITNNGSSAVDGWTLGFDLPSNATISSWWDATQAKSGNRYTAGNLAWNRRIEVGQTR
EFGFSGSYSGAWVNPSNCTINGQACSGGTTSTNVALGRPVQVSSVETSALGGANATDGNNATRWASSYSDPQWIQVDLGS
SKSLTKVVLNWEAAYARAYQVQVSDDASTWRTLSTVSNGDGGTDTLNITGSGRYVRIYATQRGTEWGYSLWEIAAYN

Sequences:

>Translated_637_residues
MKVYKPMLKFIAAFLVFLPLVTSAASSTEHFNQPISSSSMFSWYTNSSTATGTANVSDSQAQDGKILRLSIAAGQTAYPG
QGSNLVSRQMYHYGTYEARMKTANCASDEGVINGFFTYFNDGSDSNANGLPDNSEIDFEWLCAEPQSILMTIWTDYNDPT
AISRRVYRKVNLATGTIEYTRYATTFGDSYTDLSNSPSENQPTAVQAISGYNSATNYYEYGFNWTASNVTLWVVNPSNGQ
KIVLWDYRGPSARIPKNPAAFMVNLWHHPNWTPECCANATNPPRATRSMDVDWLRFTPQSDIPSDTTAPSAPSNLQAPSK
THNSVNLSWNTATDNVGVVGYDIYQNGGANPVASTSSTTITISGLNPSTAYSFAVKARDAADNRSANSNSLSVSTNNQPT
TGNGLQASFVKTSDWGNGYVGVYRITNNGSSAVDGWTLGFDLPSNATISSWWDATQAKSGNRYTAGNLAWNRRIEVGQTR
EFGFSGSYSGAWVNPSNCTINGQACSGGTTSTNVALGRPVQVSSVETSALGGANATDGNNATRWASSYSDPQWIQVDLGS
SKSLTKVVLNWEAAYARAYQVQVSDDASTWRTLSTVSNGDGGTDTLNITGSGRYVRIYATQRGTEWGYSLWEIAAYN
>Mature_637_residues
MKVYKPMLKFIAAFLVFLPLVTSAASSTEHFNQPISSSSMFSWYTNSSTATGTANVSDSQAQDGKILRLSIAAGQTAYPG
QGSNLVSRQMYHYGTYEARMKTANCASDEGVINGFFTYFNDGSDSNANGLPDNSEIDFEWLCAEPQSILMTIWTDYNDPT
AISRRVYRKVNLATGTIEYTRYATTFGDSYTDLSNSPSENQPTAVQAISGYNSATNYYEYGFNWTASNVTLWVVNPSNGQ
KIVLWDYRGPSARIPKNPAAFMVNLWHHPNWTPECCANATNPPRATRSMDVDWLRFTPQSDIPSDTTAPSAPSNLQAPSK
THNSVNLSWNTATDNVGVVGYDIYQNGGANPVASTSSTTITISGLNPSTAYSFAVKARDAADNRSANSNSLSVSTNNQPT
TGNGLQASFVKTSDWGNGYVGVYRITNNGSSAVDGWTLGFDLPSNATISSWWDATQAKSGNRYTAGNLAWNRRIEVGQTR
EFGFSGSYSGAWVNPSNCTINGQACSGGTTSTNVALGRPVQVSSVETSALGGANATDGNNATRWASSYSDPQWIQVDLGS
SKSLTKVVLNWEAAYARAYQVQVSDDASTWRTLSTVSNGDGGTDTLNITGSGRYVRIYATQRGTEWGYSLWEIAAYN

Specific function: Unknown

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 fibronectin type-III domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008965
- InterPro:   IPR012291
- InterPro:   IPR001919
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001547
- InterPro:   IPR018087
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00553 CBM_2; PF00150 Cellulase; PF00041 fn3 [H]

EC number: =3.2.1.4 [H]

Molecular weight: Translated: 68869; Mature: 68869

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50022 FA58C_3 ; PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVYKPMLKFIAAFLVFLPLVTSAASSTEHFNQPISSSSMFSWYTNSSTATGTANVSDSQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCC
AQDGKILRLSIAAGQTAYPGQGSNLVSRQMYHYGTYEARMKTANCASDEGVINGFFTYFN
CCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHEEEECCCCCCCCCEEEEEEEEC
DGSDSNANGLPDNSEIDFEWLCAEPQSILMTIWTDYNDPTAISRRVYRKVNLATGTIEYT
CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHEEEEEECEEEEE
RYATTFGDSYTDLSNSPSENQPTAVQAISGYNSATNYYEYGFNWTASNVTLWVVNPSNGQ
EEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECEEEEECCEEEEEEECCCCC
KIVLWDYRGPSARIPKNPAAFMVNLWHHPNWTPECCANATNPPRATRSMDVDWLRFTPQS
EEEEEECCCCCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCC
DIPSDTTAPSAPSNLQAPSKTHNSVNLSWNTATDNVGVVGYDIYQNGGANPVASTSSTTI
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCEE
TISGLNPSTAYSFAVKARDAADNRSANSNSLSVSTNNQPTTGNGLQASFVKTSDWGNGYV
EEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCEE
GVYRITNNGSSAVDGWTLGFDLPSNATISSWWDATQAKSGNRYTAGNLAWNRRIEVGQTR
EEEEEECCCCCCCCCEEEEEECCCCCEEHHHCCHHHCCCCCEEEECCEEEEEEEECCCCE
EFGFSGSYSGAWVNPSNCTINGQACSGGTTSTNVALGRPVQVSSVETSALGGANATDGNN
ECCCCCCCCCCEECCCCCEEECCCCCCCCCCCEEEECCCEEECCCCHHHCCCCCCCCCCC
ATRWASSYSDPQWIQVDLGSSKSLTKVVLNWEAAYARAYQVQVSDDASTWRTLSTVSNGD
CCEECCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHEEEEEECCCC
GGTDTLNITGSGRYVRIYATQRGTEWGYSLWEIAAYN
CCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKVYKPMLKFIAAFLVFLPLVTSAASSTEHFNQPISSSSMFSWYTNSSTATGTANVSDSQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCC
AQDGKILRLSIAAGQTAYPGQGSNLVSRQMYHYGTYEARMKTANCASDEGVINGFFTYFN
CCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHEEEECCCCCCCCCEEEEEEEEC
DGSDSNANGLPDNSEIDFEWLCAEPQSILMTIWTDYNDPTAISRRVYRKVNLATGTIEYT
CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHEEEEEECEEEEE
RYATTFGDSYTDLSNSPSENQPTAVQAISGYNSATNYYEYGFNWTASNVTLWVVNPSNGQ
EEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECEEEEECCEEEEEEECCCCC
KIVLWDYRGPSARIPKNPAAFMVNLWHHPNWTPECCANATNPPRATRSMDVDWLRFTPQS
EEEEEECCCCCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCC
DIPSDTTAPSAPSNLQAPSKTHNSVNLSWNTATDNVGVVGYDIYQNGGANPVASTSSTTI
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCEE
TISGLNPSTAYSFAVKARDAADNRSANSNSLSVSTNNQPTTGNGLQASFVKTSDWGNGYV
EEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCEE
GVYRITNNGSSAVDGWTLGFDLPSNATISSWWDATQAKSGNRYTAGNLAWNRRIEVGQTR
EEEEEECCCCCCCCCEEEEEECCCCCEEHHHCCHHHCCCCCEEEECCEEEEEEEECCCCE
EFGFSGSYSGAWVNPSNCTINGQACSGGTTSTNVALGRPVQVSSVETSALGGANATDGNN
ECCCCCCCCCCEECCCCCEEECCCCCCCCCCCEEEECCCEEECCCCHHHCCCCCCCCCCC
ATRWASSYSDPQWIQVDLGSSKSLTKVVLNWEAAYARAYQVQVSDDASTWRTLSTVSNGD
CCEECCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHEEEEEECCCC
GGTDTLNITGSGRYVRIYATQRGTEWGYSLWEIAAYN
CCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8458833 [H]