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The map label for this gene is 159899003

Identifier: 159899003

GI number: 159899003

Start: 3176032

End: 3176313

Strand: Direct

Name: 159899003

Synonym: Haur_2484

Alternate gene names: NA

Gene position: 3176032-3176313 (Clockwise)

Preceding gene: 159899002

Following gene: 159899010

Centisome position: 50.04

GC content: 45.39

Gene sequence:

>282_bases
ATGTTGTACTTGATCTCCTACGATATTGCGGTTGATAAACGGCGCACGAAAATTGCCAAAATTCTTGAAGGCTTTGGTCA
GCGAGTGCAATATAGCGTTTTTGAATGCGACTTGACCGCCAAGCAATATACCAAATTGCGCGGCAAATTGCATAAAGTGC
TGCGGCCAGAAGATGGCGATAATTTGCGAACATATCGGATTTGTGCTGCCTGTGCCCCAAATACCGAAATTGTGGGCAAT
GGGCCAGCGCTCGAAACCAGCGTTACGATTTACATTTTTTGA

Upstream 100 bases:

>100_bases
TCAGTTATTGGCGTTGTATCGAGCTTCAAGCCCGCTTATTGGCCCGCGCAATCCAGACTGGCACAAGCTATCAAGCTTGG
ACAACCCGTTAGGAGCGCGT

Downstream 100 bases:

>100_bases
ATTTCGGCATTGCAAAGCGCTAAATCGATGGTTATTCACAATTTAACTTTTTCAACATGCCGCGCGATCCCATTCTGAAG
GGCAGAAAGCGACTTATCCA

Product: CRISPR-associated Cas2 family protein

Products: NA

Alternate protein names: CRISPR-Associated Protein Cas2 Family

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MLYLISYDIAVDKRRTKIAKILEGFGQRVQYSVFECDLTAKQYTKLRGKLHKVLRPEDGDNLRTYRICAACAPNTEIVGN
GPALETSVTIYIF

Sequences:

>Translated_93_residues
MLYLISYDIAVDKRRTKIAKILEGFGQRVQYSVFECDLTAKQYTKLRGKLHKVLRPEDGDNLRTYRICAACAPNTEIVGN
GPALETSVTIYIF
>Mature_93_residues
MLYLISYDIAVDKRRTKIAKILEGFGQRVQYSVFECDLTAKQYTKLRGKLHKVLRPEDGDNLRTYRICAACAPNTEIVGN
GPALETSVTIYIF

Specific function: Unknown

COG id: COG1343

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10573; Mature: 10573

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLISYDIAVDKRRTKIAKILEGFGQRVQYSVFECDLTAKQYTKLRGKLHKVLRPEDGD
CEEEEEECEEECHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCC
NLRTYRICAACAPNTEIVGNGPALETSVTIYIF
CCEEEEEEEECCCCCEEEECCCCCCEEEEEEEC
>Mature Secondary Structure
MLYLISYDIAVDKRRTKIAKILEGFGQRVQYSVFECDLTAKQYTKLRGKLHKVLRPEDGD
CEEEEEECEEECHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCC
NLRTYRICAACAPNTEIVGNGPALETSVTIYIF
CCEEEEEEEECCCCCEEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA