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The map label for this gene is 159899002

Identifier: 159899002

GI number: 159899002

Start: 3175004

End: 3176023

Strand: Direct

Name: 159899002

Synonym: Haur_2483

Alternate gene names: NA

Gene position: 3175004-3176023 (Clockwise)

Preceding gene: 159899001

Following gene: 159899003

Centisome position: 50.03

GC content: 49.8

Gene sequence:

>1020_bases
ATGGCAACGCTTTATGTTCTCGAACAAGGTGCAGAAATTCGCTGTGACGGTGAACGGCTAGCAATTTGGCAAACTGATCA
AGAGCTGGGCAATGTGCCAATGGCCAAACTTGAAGATATTGTAGTGATGGGCAATATTGGGTTTAGCACGCCTGCGATCA
AGCGCCTGTTGGATCAACAGATCGAAGTAACATTTTTGACGATTCACGGGCGCTACCATGGGCGCTTGATTGGCGAAGCG
ACCGCCCATGTGGCCTTGCGTCGCAACCAATATCGCCGAGCAGATGATGAGGTTTGGGCTTTGGCGATGGCTCAAGCCTG
TGTTAGCGGCAAATTACGCAATTGCCGTGCTGTATTGCAACGCTTCGCCCGCAACCGCCAACAGGTCGAAAAAGAGGTTT
TGGAATCGATTGAAGCCTTAGACCATTTTATTGATCGGGTTGATCGCACCACCAAAATCAGCTCATTGGTTGGGGTTGAA
GGTAGTGGCTCGGCAGCCTATTTTGGTGGTTTACGCGGCCTCTTTGATAGCGAATGGATGTTCAATAATCGTAATCGCCG
CCCACCAACCGACCCAGTTAATGTATTATTATCGTTGGGCTATACCCTTTTGGTGCATAAAACCCTTGGCGCAGTTCAGG
CGGTAGGGTTCGATCCTTATCAAGGATTTTTACATCAACTCGATTACAATCGACCATCGTTAGTGCTTGATTTGATCGAA
GAATTTCGGCCAATTTTGGTTGATGCTTTGGTGATTCGCTGCTGTAATGATGGCAGGCTGACGGCCAATGATTTCAGCCC
GAGCGACGATCCCAAGCACCCGATTTTACTCAGCAATGAGGGCAAAAAACGCTTTGTAGTGGCCTTTGAAGAACGCATGC
GCACCGAAGTAACCCATCCCGATGGCGCAGACGGACGGCCTGGCAAAGTCAGTTATTGGCGTTGTATCGAGCTTCAAGCC
CGCTTATTGGCCCGCGCAATCCAGACTGGCACAAGCTATCAAGCTTGGACAACCCGTTAG

Upstream 100 bases:

>100_bases
TGACACCTTGGCGCGGTTTGCTTTTTGGAGCGGAGTTGGAGCCGGAACGACGCGCGGTTTAGGCCGTGCCCGCTTAATTG
AACGCTAAGGAGTGGGAATT

Downstream 100 bases:

>100_bases
GAGCGCGTATGTTGTACTTGATCTCCTACGATATTGCGGTTGATAAACGGCGCACGAAAATTGCCAAAATTCTTGAAGGC
TTTGGTCAGCGAGTGCAATA

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MATLYVLEQGAEIRCDGERLAIWQTDQELGNVPMAKLEDIVVMGNIGFSTPAIKRLLDQQIEVTFLTIHGRYHGRLIGEA
TAHVALRRNQYRRADDEVWALAMAQACVSGKLRNCRAVLQRFARNRQQVEKEVLESIEALDHFIDRVDRTTKISSLVGVE
GSGSAAYFGGLRGLFDSEWMFNNRNRRPPTDPVNVLLSLGYTLLVHKTLGAVQAVGFDPYQGFLHQLDYNRPSLVLDLIE
EFRPILVDALVIRCCNDGRLTANDFSPSDDPKHPILLSNEGKKRFVVAFEERMRTEVTHPDGADGRPGKVSYWRCIELQA
RLLARAIQTGTSYQAWTTR

Sequences:

>Translated_339_residues
MATLYVLEQGAEIRCDGERLAIWQTDQELGNVPMAKLEDIVVMGNIGFSTPAIKRLLDQQIEVTFLTIHGRYHGRLIGEA
TAHVALRRNQYRRADDEVWALAMAQACVSGKLRNCRAVLQRFARNRQQVEKEVLESIEALDHFIDRVDRTTKISSLVGVE
GSGSAAYFGGLRGLFDSEWMFNNRNRRPPTDPVNVLLSLGYTLLVHKTLGAVQAVGFDPYQGFLHQLDYNRPSLVLDLIE
EFRPILVDALVIRCCNDGRLTANDFSPSDDPKHPILLSNEGKKRFVVAFEERMRTEVTHPDGADGRPGKVSYWRCIELQA
RLLARAIQTGTSYQAWTTR
>Mature_338_residues
ATLYVLEQGAEIRCDGERLAIWQTDQELGNVPMAKLEDIVVMGNIGFSTPAIKRLLDQQIEVTFLTIHGRYHGRLIGEAT
AHVALRRNQYRRADDEVWALAMAQACVSGKLRNCRAVLQRFARNRQQVEKEVLESIEALDHFIDRVDRTTKISSLVGVEG
SGSAAYFGGLRGLFDSEWMFNNRNRRPPTDPVNVLLSLGYTLLVHKTLGAVQAVGFDPYQGFLHQLDYNRPSLVLDLIEE
FRPILVDALVIRCCNDGRLTANDFSPSDDPKHPILLSNEGKKRFVVAFEERMRTEVTHPDGADGRPGKVSYWRCIELQAR
LLARAIQTGTSYQAWTTR

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 38269; Mature: 38138

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLYVLEQGAEIRCDGERLAIWQTDQELGNVPMAKLEDIVVMGNIGFSTPAIKRLLDQQ
CCEEEEEECCCEEEECCCEEEEEECCHHHCCCCHHHHCCEEEECCCCCCCHHHHHHHHCC
IEVTFLTIHGRYHGRLIGEATAHVALRRNQYRRADDEVWALAMAQACVSGKLRNCRAVLQ
EEEEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
RFARNRQQVEKEVLESIEALDHFIDRVDRTTKISSLVGVEGSGSAAYFGGLRGLFDSEWM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC
FNNRNRRPPTDPVNVLLSLGYTLLVHKTLGAVQAVGFDPYQGFLHQLDYNRPSLVLDLIE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
EFRPILVDALVIRCCNDGRLTANDFSPSDDPKHPILLSNEGKKRFVVAFEERMRTEVTHP
HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHCCCC
DGADGRPGKVSYWRCIELQARLLARAIQTGTSYQAWTTR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ATLYVLEQGAEIRCDGERLAIWQTDQELGNVPMAKLEDIVVMGNIGFSTPAIKRLLDQQ
CEEEEEECCCEEEECCCEEEEEECCHHHCCCCHHHHCCEEEECCCCCCCHHHHHHHHCC
IEVTFLTIHGRYHGRLIGEATAHVALRRNQYRRADDEVWALAMAQACVSGKLRNCRAVLQ
EEEEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
RFARNRQQVEKEVLESIEALDHFIDRVDRTTKISSLVGVEGSGSAAYFGGLRGLFDSEWM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC
FNNRNRRPPTDPVNVLLSLGYTLLVHKTLGAVQAVGFDPYQGFLHQLDYNRPSLVLDLIE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
EFRPILVDALVIRCCNDGRLTANDFSPSDDPKHPILLSNEGKKRFVVAFEERMRTEVTHP
HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHCCCC
DGADGRPGKVSYWRCIELQARLLARAIQTGTSYQAWTTR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]