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The map label for this gene is 159898994

Identifier: 159898994

GI number: 159898994

Start: 3165630

End: 3167825

Strand: Direct

Name: 159898994

Synonym: Haur_2475

Alternate gene names: NA

Gene position: 3165630-3167825 (Clockwise)

Preceding gene: 159898993

Following gene: 159898995

Centisome position: 49.88

GC content: 51.46

Gene sequence:

>2196_bases
ATGAGTGATCCCCCAGTCATACGGGCATTGAAGAGTATGACAAACTCGGTCAAGGCTTGGGATACTACGCCACTGCATTC
GATCTTCAACCAAATTGCTCCATCAGCCGAGCCAAACACCCAAACTTCAACGCCCTACTTTCTCCAAGCGCAACGTTTTA
GCCTCACCGAATCTGCGCTTTTTCCAATCACCGAACGTCCGCCAGTTTCAGCCGATTTACAAACTCAATTCAATCAAGCG
ATTGAGCAATGCCATGCCGAGCCAAGCATTCATGTGGTCCAGATGCTGAGCTTGTTTCACGATTATGCTTGGGCCGTCAG
CTACCAGCCAACTGCTGGCGAGACAGCCGATCCGGTTGTATCGCTCTACGATTATGCTCGCACCAAAGCCGCGTTGGCCG
CCGCTGGTGAGCAAACCATGTTAGTTGGTGGCGATCTTTCGGGCGTGCAGGATTTTATCTACACCATCGCGGCCAATCGT
GCCGCCAAAAGCCTGCGCGGTCGCTCATTCTATTTGCAAATGCTGACCGATGCCTTGGCTGGTTGGGTGTTGCAGCAAGC
AGGCATGCCCAGCACTAATTTGCTCTATAGCGGCGGTGGGCGATTTTATGTGATTGTGCCCGCCGCTTGTTACGAACAAT
TGGCGCAGTGGCGACGGGCGCTTGGCCAATTTTTGCTGAATGTCCACGATGGCGAGTTGTATATCGCCTTGGGTGGCGCG
ACCATCGCCGATGCTGCGCACAATTTTGAGGCCTTATTTCGCGCCGTCAACGACCAAGTGACCGCTGATAAACGTCGCCG
TTTTGCAACCCTCGATAATCAAGAGCTGCAAGCCAAATTGTTCACGCCACGCGGCCATCGCGGCAACGAGGATGACCGCT
GCGCAACCTGTGGTTATATGGGGCCGAGCAATCAATTTGAAGCCGATGAAGATGATAGCAAGATCTGCCGGCTCTGCGAA
AGCACGATTAAGCTGGCATTCAGCTTGCACGATGCCCAATTTCTTTGCATCAGCCAGCCACAGCCCAATCTCTCTGCGGT
CAAAGGCCGCACAAACGCAAAGGATATTTTGGCGGGCTTGGGTTTGCAGGCAGAAATTTGTTTCGATCAGCAGGAATTGA
TCGATCATCTCAATCGCAATTCAGCACAATCAATCCATGTGCAGATTATTCGGCCCTTTGCGGGCGATTTAGCGATGCTG
AGCCAACTTCGTGCCAATTATCGCCAGCATGTCTTTAGCATACGCCCAATCGTCAATGTAACACCTAAAGCTCCTAACGG
TGAGGTCAAATCGTTTGATCAGTTGGCCAAAGCGAGTCGTGGCATCAAGCGTTTTGGGGTGCTGCGCATGGATGTTGATG
ATCTTGGCGATATTTTTGGCTATAGCCTTGCCAAAGCCTCGTTGGCCCGTATTTCAAGCCTGAGTGCCGCCTTTTCGCGC
TTTTTCGAGGGCTGGGTTGGCGAAATTTGTCGTGACCAGAATATTGCCGCCGCAATCTACCAGCCGGAGCAAGCGAGCAA
TCAAGCAATCAGCCCTGAACAAATTTACAGCGTCTATTCGGGCGGCGACGATTTGTTTCTGGTTGGCAGTTGGGATGTGC
TGGCCCATGTCGCCAATCGAATTCAACACGATCTTCAGCGCTACACGGGCTATAACCAATTAATCCATGTTTCGGCGGGA
TTGACCCTGCACACCGAAAAATTCCCGTTATATCAAGCGGCCAAACTAGCCCATCATGCGCTTGATCAGGCCAAAGATGC
TGCGCCACGCCAAGCAATTCGCAAAAACGCCCTAGATTTCCTTGATCAAACGATTGCCTGGGAAGCCTACCCCGCCTTGA
TCAACTGGCATCAACGTTTGTGGCGGCTCTATCAAGGCGAGCATGGCATGGTGCGTTCGCTGCTGCAAGTGCTGATGGAG
CTGTATAGCCAATATAACGAGCATAGCCAGCAACGTCAAAAATCGGGCAAAAAACACACCGCCTATGGCCCATGGATTTG
GCGTGGCAAATATCAACTGGCCCGCATTCGCCAACGCTATGAGAACCATCAAGAATTACAAAAACTCTTGCGAGATATCG
ATGAAGATTTATTTACGGGGTTCGATGATCCGCATCGGATCAGTTTGCGCACAATCGAGCAGCTTGGCTTAGCCGCTCGT
TGGACACAATTATTAATTCGTGAGCAAGGAGATTAA

Upstream 100 bases:

>100_bases
CAAACAGCATAACCGAACAGATATTCGTTTATGCAGCGCACATATATGCACAACCCATCAGCTAAAGTAAGCCATCGTTA
GCGTTCTACAAGGAGGTTGT

Downstream 100 bases:

>100_bases
TCATGCCTGAGATTAGCGAACAAGAACGCGAAGCAATTATTGCTGGCGATGACGTTGAAAAATTGGTTGAAGCCGCCCAA
AAAATCGGCGAGAAATTGGC

Product: CRISPR-associated Csm1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 731; Mature: 730

Protein sequence:

>731_residues
MSDPPVIRALKSMTNSVKAWDTTPLHSIFNQIAPSAEPNTQTSTPYFLQAQRFSLTESALFPITERPPVSADLQTQFNQA
IEQCHAEPSIHVVQMLSLFHDYAWAVSYQPTAGETADPVVSLYDYARTKAALAAAGEQTMLVGGDLSGVQDFIYTIAANR
AAKSLRGRSFYLQMLTDALAGWVLQQAGMPSTNLLYSGGGRFYVIVPAACYEQLAQWRRALGQFLLNVHDGELYIALGGA
TIADAAHNFEALFRAVNDQVTADKRRRFATLDNQELQAKLFTPRGHRGNEDDRCATCGYMGPSNQFEADEDDSKICRLCE
STIKLAFSLHDAQFLCISQPQPNLSAVKGRTNAKDILAGLGLQAEICFDQQELIDHLNRNSAQSIHVQIIRPFAGDLAML
SQLRANYRQHVFSIRPIVNVTPKAPNGEVKSFDQLAKASRGIKRFGVLRMDVDDLGDIFGYSLAKASLARISSLSAAFSR
FFEGWVGEICRDQNIAAAIYQPEQASNQAISPEQIYSVYSGGDDLFLVGSWDVLAHVANRIQHDLQRYTGYNQLIHVSAG
LTLHTEKFPLYQAAKLAHHALDQAKDAAPRQAIRKNALDFLDQTIAWEAYPALINWHQRLWRLYQGEHGMVRSLLQVLME
LYSQYNEHSQQRQKSGKKHTAYGPWIWRGKYQLARIRQRYENHQELQKLLRDIDEDLFTGFDDPHRISLRTIEQLGLAAR
WTQLLIREQGD

Sequences:

>Translated_731_residues
MSDPPVIRALKSMTNSVKAWDTTPLHSIFNQIAPSAEPNTQTSTPYFLQAQRFSLTESALFPITERPPVSADLQTQFNQA
IEQCHAEPSIHVVQMLSLFHDYAWAVSYQPTAGETADPVVSLYDYARTKAALAAAGEQTMLVGGDLSGVQDFIYTIAANR
AAKSLRGRSFYLQMLTDALAGWVLQQAGMPSTNLLYSGGGRFYVIVPAACYEQLAQWRRALGQFLLNVHDGELYIALGGA
TIADAAHNFEALFRAVNDQVTADKRRRFATLDNQELQAKLFTPRGHRGNEDDRCATCGYMGPSNQFEADEDDSKICRLCE
STIKLAFSLHDAQFLCISQPQPNLSAVKGRTNAKDILAGLGLQAEICFDQQELIDHLNRNSAQSIHVQIIRPFAGDLAML
SQLRANYRQHVFSIRPIVNVTPKAPNGEVKSFDQLAKASRGIKRFGVLRMDVDDLGDIFGYSLAKASLARISSLSAAFSR
FFEGWVGEICRDQNIAAAIYQPEQASNQAISPEQIYSVYSGGDDLFLVGSWDVLAHVANRIQHDLQRYTGYNQLIHVSAG
LTLHTEKFPLYQAAKLAHHALDQAKDAAPRQAIRKNALDFLDQTIAWEAYPALINWHQRLWRLYQGEHGMVRSLLQVLME
LYSQYNEHSQQRQKSGKKHTAYGPWIWRGKYQLARIRQRYENHQELQKLLRDIDEDLFTGFDDPHRISLRTIEQLGLAAR
WTQLLIREQGD
>Mature_730_residues
SDPPVIRALKSMTNSVKAWDTTPLHSIFNQIAPSAEPNTQTSTPYFLQAQRFSLTESALFPITERPPVSADLQTQFNQAI
EQCHAEPSIHVVQMLSLFHDYAWAVSYQPTAGETADPVVSLYDYARTKAALAAAGEQTMLVGGDLSGVQDFIYTIAANRA
AKSLRGRSFYLQMLTDALAGWVLQQAGMPSTNLLYSGGGRFYVIVPAACYEQLAQWRRALGQFLLNVHDGELYIALGGAT
IADAAHNFEALFRAVNDQVTADKRRRFATLDNQELQAKLFTPRGHRGNEDDRCATCGYMGPSNQFEADEDDSKICRLCES
TIKLAFSLHDAQFLCISQPQPNLSAVKGRTNAKDILAGLGLQAEICFDQQELIDHLNRNSAQSIHVQIIRPFAGDLAMLS
QLRANYRQHVFSIRPIVNVTPKAPNGEVKSFDQLAKASRGIKRFGVLRMDVDDLGDIFGYSLAKASLARISSLSAAFSRF
FEGWVGEICRDQNIAAAIYQPEQASNQAISPEQIYSVYSGGDDLFLVGSWDVLAHVANRIQHDLQRYTGYNQLIHVSAGL
TLHTEKFPLYQAAKLAHHALDQAKDAAPRQAIRKNALDFLDQTIAWEAYPALINWHQRLWRLYQGEHGMVRSLLQVLMEL
YSQYNEHSQQRQKSGKKHTAYGPWIWRGKYQLARIRQRYENHQELQKLLRDIDEDLFTGFDDPHRISLRTIEQLGLAARW
TQLLIREQGD

Specific function: Unknown

COG id: COG1353

COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013408
- InterPro:   IPR000160 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82094; Mature: 81962

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPPVIRALKSMTNSVKAWDTTPLHSIFNQIAPSAEPNTQTSTPYFLQAQRFSLTESAL
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHCCCHHHC
FPITERPPVSADLQTQFNQAIEQCHAEPSIHVVQMLSLFHDYAWAVSYQPTAGETADPVV
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHH
SLYDYARTKAALAAAGEQTMLVGGDLSGVQDFIYTIAANRAAKSLRGRSFYLQMLTDALA
HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GWVLQQAGMPSTNLLYSGGGRFYVIVPAACYEQLAQWRRALGQFLLNVHDGELYIALGGA
HHHHHHCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCC
TIADAAHNFEALFRAVNDQVTADKRRRFATLDNQELQAKLFTPRGHRGNEDDRCATCGYM
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCCCCEEECCCC
GPSNQFEADEDDSKICRLCESTIKLAFSLHDAQFLCISQPQPNLSAVKGRTNAKDILAGL
CCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCHHHHCCCCCHHHHHHHC
GLQAEICFDQQELIDHLNRNSAQSIHVQIIRPFAGDLAMLSQLRANYRQHVFSIRPIVNV
CCCEEECCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
TPKAPNGEVKSFDQLAKASRGIKRFGVLRMDVDDLGDIFGYSLAKASLARISSLSAAFSR
CCCCCCCCHHHHHHHHHHHCCHHHHCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFEGWVGEICRDQNIAAAIYQPEQASNQAISPEQIYSVYSGGDDLFLVGSWDVLAHVANR
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHH
IQHDLQRYTGYNQLIHVSAGLTLHTEKFPLYQAAKLAHHALDQAKDAAPRQAIRKNALDF
HHHHHHHHCCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LDQTIAWEAYPALINWHQRLWRLYQGEHGMVRSLLQVLMELYSQYNEHSQQRQKSGKKHT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AYGPWIWRGKYQLARIRQRYENHQELQKLLRDIDEDLFTGFDDPHRISLRTIEQLGLAAR
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHH
WTQLLIREQGD
HHHHHHHCCCC
>Mature Secondary Structure 
SDPPVIRALKSMTNSVKAWDTTPLHSIFNQIAPSAEPNTQTSTPYFLQAQRFSLTESAL
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHCCCHHHC
FPITERPPVSADLQTQFNQAIEQCHAEPSIHVVQMLSLFHDYAWAVSYQPTAGETADPVV
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHH
SLYDYARTKAALAAAGEQTMLVGGDLSGVQDFIYTIAANRAAKSLRGRSFYLQMLTDALA
HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GWVLQQAGMPSTNLLYSGGGRFYVIVPAACYEQLAQWRRALGQFLLNVHDGELYIALGGA
HHHHHHCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCC
TIADAAHNFEALFRAVNDQVTADKRRRFATLDNQELQAKLFTPRGHRGNEDDRCATCGYM
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCCCCEEECCCC
GPSNQFEADEDDSKICRLCESTIKLAFSLHDAQFLCISQPQPNLSAVKGRTNAKDILAGL
CCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCHHHHCCCCCHHHHHHHC
GLQAEICFDQQELIDHLNRNSAQSIHVQIIRPFAGDLAMLSQLRANYRQHVFSIRPIVNV
CCCEEECCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
TPKAPNGEVKSFDQLAKASRGIKRFGVLRMDVDDLGDIFGYSLAKASLARISSLSAAFSR
CCCCCCCCHHHHHHHHHHHCCHHHHCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFEGWVGEICRDQNIAAAIYQPEQASNQAISPEQIYSVYSGGDDLFLVGSWDVLAHVANR
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHH
IQHDLQRYTGYNQLIHVSAGLTLHTEKFPLYQAAKLAHHALDQAKDAAPRQAIRKNALDF
HHHHHHHHCCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LDQTIAWEAYPALINWHQRLWRLYQGEHGMVRSLLQVLMELYSQYNEHSQQRQKSGKKHT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AYGPWIWRGKYQLARIRQRYENHQELQKLLRDIDEDLFTGFDDPHRISLRTIEQLGLAAR
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHH
WTQLLIREQGD
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]