Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898984

Identifier: 159898984

GI number: 159898984

Start: 3146295

End: 3147893

Strand: Direct

Name: 159898984

Synonym: Haur_2465

Alternate gene names: NA

Gene position: 3146295-3147893 (Clockwise)

Preceding gene: 159898983

Following gene: 159898986

Centisome position: 49.57

GC content: 45.97

Gene sequence:

>1599_bases
ATGGCTCAACGTGCCTTTTTTCGGCTTATGCTGCTTTTGTTGATACTGGGATCGGTTTCAAGTCTCGCAGCCAATTATTT
ACCCCCCAGCACCACCTATATGCCAATTGTGATGGGCAATCACGAGATCACGGCCAATACGTATGTTCCTAGTTATTCTG
CACTTTTTCAATTTGGGCTAAACCCTGGTTACTATGGCAACGGCTGGGATGATCAAAAAATTTATGCAATTGGGGCTGAT
GCGGGAGCACACAGCGCCCGCGCTTCGCTCCCAGATAGTTTTATTGGCCAATGGGGCGCGGCGATTCGGGTTCCAGTCTT
CGAATATATTTCTACTACGCTTAGTTTTCGCGAAAACACGGTCTTTTTAGGCGAGCCACGCGCTGCTTGGCGCGATACCG
CCAGCTACTACAGCAACAACGGCACACCTATACAAAGCAAGCTCTGGCAAGGCATGTACGAGCCAATTTGGGATAATGGC
GAGAATGGCACACCCGTCAATGATGCGAATAAATTTGCTGTGTATGTTTGGCAGATTGCCAGCACCTATGGCAAATATAT
GCGCTTCTATGAAATTATCAACGAGCCAGATTATACTAACAGCGCCAGAGCTTATGCTAACCCTGGTGCGAGCGGTGGCA
GTTGGTGGGATAGTGCGCCAACTCCGAATGAATTACCAAATCTGAATGCACCAATTTACAATTACATTCGTTTATTACGG
ATTGCCTACACCGTGATTAAAAAGACTGATCCTGACAGTTATGTTGCGCCAGGTGGTATTGGCTATGCCTCGTTTTTGGA
TGCACTGTTGCGCTATACCGATAATCCCGATGCTGGCAAAGTCAGCAGCCAATATCCATTAACTGGCGGAGCTTATTTCG
ATGCCCTAAGTTATCATATTTATCCGCAATATGGTGGCTCCTATTGGGATAATGGAGTTGGCGGTTTTGTCTATGTGCGG
CATAGCGACCGCATGAGCCAAGTTTTCGTCAATCAATACCAAACAATGAACGAAACTTTAGCGGCCCGCAATTACAACGG
CACAACCTTTCCACGCAAGCCAAGTATCATCACTGAAACCAATGTTTCACGTAAAGCCTTCAATAATTACGCTGGCGGCG
AAGAAATTCAGCGTAATTATCTGATCAAAGCCATCGTCAAAGGCCAGCAACTTGGTATTTTGCAAATTTATTGGTTTGCC
ACTGGCGAGGGCGCAGATTATGCAACCGCTCAAGATGAATACCAATTAATGGGCTTTTACGAAAATCTCAAGCGTAATGC
ACCTAATAATCAGATTATGACAAGCGAGGGCATTGCCAACCGCACAACCTACAATCAACTGTATGGCTGGCGCTACGATG
CAACTGCAACGGCTGCATTAAATTTGCCCAGCACAATCGATGGTGCAGCGTTTCGTAAAAACAATCAATTGCGTTATGTT
TTATGGGCCAAAACCACGCTTGATCGCAATGAAACTGCTAACGCCACGATTAATTTAACTGGAACTTACACCAAAGTGGC
TTGGAATGGCACAAGTAGTACAGTCAGCGGCAGCAACATCCAACTAACAGGCTCGCCAATTTTCTTAACGCAACAATAA

Upstream 100 bases:

>100_bases
CCCGTTTAACCAACGAGCCAATCAAAGAACAGATTCAATTTAGCCTTAAACCAACCACCGCTGATCGTTTCGGCAATTAA
CAACCAACTCAGGAGGTTGT

Downstream 100 bases:

>100_bases
CCGCAACTGCAAAAGCCCTTCGCCTATCGCGATAACGGCGATAACGAAGGGCTTTGATGATCAGTTACAAGCGTTATTCG
CTAAATGGCAGCGTCAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MAQRAFFRLMLLLLILGSVSSLAANYLPPSTTYMPIVMGNHEITANTYVPSYSALFQFGLNPGYYGNGWDDQKIYAIGAD
AGAHSARASLPDSFIGQWGAAIRVPVFEYISTTLSFRENTVFLGEPRAAWRDTASYYSNNGTPIQSKLWQGMYEPIWDNG
ENGTPVNDANKFAVYVWQIASTYGKYMRFYEIINEPDYTNSARAYANPGASGGSWWDSAPTPNELPNLNAPIYNYIRLLR
IAYTVIKKTDPDSYVAPGGIGYASFLDALLRYTDNPDAGKVSSQYPLTGGAYFDALSYHIYPQYGGSYWDNGVGGFVYVR
HSDRMSQVFVNQYQTMNETLAARNYNGTTFPRKPSIITETNVSRKAFNNYAGGEEIQRNYLIKAIVKGQQLGILQIYWFA
TGEGADYATAQDEYQLMGFYENLKRNAPNNQIMTSEGIANRTTYNQLYGWRYDATATAALNLPSTIDGAAFRKNNQLRYV
LWAKTTLDRNETANATINLTGTYTKVAWNGTSSTVSGSNIQLTGSPIFLTQQ

Sequences:

>Translated_532_residues
MAQRAFFRLMLLLLILGSVSSLAANYLPPSTTYMPIVMGNHEITANTYVPSYSALFQFGLNPGYYGNGWDDQKIYAIGAD
AGAHSARASLPDSFIGQWGAAIRVPVFEYISTTLSFRENTVFLGEPRAAWRDTASYYSNNGTPIQSKLWQGMYEPIWDNG
ENGTPVNDANKFAVYVWQIASTYGKYMRFYEIINEPDYTNSARAYANPGASGGSWWDSAPTPNELPNLNAPIYNYIRLLR
IAYTVIKKTDPDSYVAPGGIGYASFLDALLRYTDNPDAGKVSSQYPLTGGAYFDALSYHIYPQYGGSYWDNGVGGFVYVR
HSDRMSQVFVNQYQTMNETLAARNYNGTTFPRKPSIITETNVSRKAFNNYAGGEEIQRNYLIKAIVKGQQLGILQIYWFA
TGEGADYATAQDEYQLMGFYENLKRNAPNNQIMTSEGIANRTTYNQLYGWRYDATATAALNLPSTIDGAAFRKNNQLRYV
LWAKTTLDRNETANATINLTGTYTKVAWNGTSSTVSGSNIQLTGSPIFLTQQ
>Mature_531_residues
AQRAFFRLMLLLLILGSVSSLAANYLPPSTTYMPIVMGNHEITANTYVPSYSALFQFGLNPGYYGNGWDDQKIYAIGADA
GAHSARASLPDSFIGQWGAAIRVPVFEYISTTLSFRENTVFLGEPRAAWRDTASYYSNNGTPIQSKLWQGMYEPIWDNGE
NGTPVNDANKFAVYVWQIASTYGKYMRFYEIINEPDYTNSARAYANPGASGGSWWDSAPTPNELPNLNAPIYNYIRLLRI
AYTVIKKTDPDSYVAPGGIGYASFLDALLRYTDNPDAGKVSSQYPLTGGAYFDALSYHIYPQYGGSYWDNGVGGFVYVRH
SDRMSQVFVNQYQTMNETLAARNYNGTTFPRKPSIITETNVSRKAFNNYAGGEEIQRNYLIKAIVKGQQLGILQIYWFAT
GEGADYATAQDEYQLMGFYENLKRNAPNNQIMTSEGIANRTTYNQLYGWRYDATATAALNLPSTIDGAAFRKNNQLRYVL
WAKTTLDRNETANATINLTGTYTKVAWNGTSSTVSGSNIQLTGSPIFLTQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59280; Mature: 59148

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRAFFRLMLLLLILGSVSSLAANYLPPSTTYMPIVMGNHEITANTYVPSYSALFQFGL
CCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHCCC
NPGYYGNGWDDQKIYAIGADAGAHSARASLPDSFIGQWGAAIRVPVFEYISTTLSFRENT
CCCCCCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHCCCCEEECHHHHHHHHHHHHCCCE
VFLGEPRAAWRDTASYYSNNGTPIQSKLWQGMYEPIWDNGENGTPVNDANKFAVYVWQIA
EEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHCCCCCCCCCCCCCCCEEEEEEHHH
STYGKYMRFYEIINEPDYTNSARAYANPGASGGSWWDSAPTPNELPNLNAPIYNYIRLLR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
IAYTVIKKTDPDSYVAPGGIGYASFLDALLRYTDNPDAGKVSSQYPLTGGAYFDALSYHI
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEEEEE
YPQYGGSYWDNGVGGFVYVRHSDRMSQVFVNQYQTMNETLAARNYNGTTFPRKPSIITET
EECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
NVSRKAFNNYAGGEEIQRNYLIKAIVKGQQLGILQIYWFATGEGADYATAQDEYQLMGFY
CCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHH
ENLKRNAPNNQIMTSEGIANRTTYNQLYGWRYDATATAALNLPSTIDGAAFRKNNQLRYV
HHHHCCCCCCCEEECCCCCCCCCHHHHCCEEECCCEEEEECCCCCCCCHHEECCCCEEEE
LWAKTTLDRNETANATINLTGTYTKVAWNGTSSTVSGSNIQLTGSPIFLTQQ
EEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEEECCEEEEECC
>Mature Secondary Structure 
AQRAFFRLMLLLLILGSVSSLAANYLPPSTTYMPIVMGNHEITANTYVPSYSALFQFGL
CHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHCCC
NPGYYGNGWDDQKIYAIGADAGAHSARASLPDSFIGQWGAAIRVPVFEYISTTLSFRENT
CCCCCCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHCCCCEEECHHHHHHHHHHHHCCCE
VFLGEPRAAWRDTASYYSNNGTPIQSKLWQGMYEPIWDNGENGTPVNDANKFAVYVWQIA
EEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHCCCCCCCCCCCCCCCEEEEEEHHH
STYGKYMRFYEIINEPDYTNSARAYANPGASGGSWWDSAPTPNELPNLNAPIYNYIRLLR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
IAYTVIKKTDPDSYVAPGGIGYASFLDALLRYTDNPDAGKVSSQYPLTGGAYFDALSYHI
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEEEEE
YPQYGGSYWDNGVGGFVYVRHSDRMSQVFVNQYQTMNETLAARNYNGTTFPRKPSIITET
EECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
NVSRKAFNNYAGGEEIQRNYLIKAIVKGQQLGILQIYWFATGEGADYATAQDEYQLMGFY
CCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHH
ENLKRNAPNNQIMTSEGIANRTTYNQLYGWRYDATATAALNLPSTIDGAAFRKNNQLRYV
HHHHCCCCCCCEEECCCCCCCCCHHHHCCEEECCCEEEEECCCCCCCCHHEECCCCEEEE
LWAKTTLDRNETANATINLTGTYTKVAWNGTSSTVSGSNIQLTGSPIFLTQQ
EEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA