| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898984
Identifier: 159898984
GI number: 159898984
Start: 3146295
End: 3147893
Strand: Direct
Name: 159898984
Synonym: Haur_2465
Alternate gene names: NA
Gene position: 3146295-3147893 (Clockwise)
Preceding gene: 159898983
Following gene: 159898986
Centisome position: 49.57
GC content: 45.97
Gene sequence:
>1599_bases ATGGCTCAACGTGCCTTTTTTCGGCTTATGCTGCTTTTGTTGATACTGGGATCGGTTTCAAGTCTCGCAGCCAATTATTT ACCCCCCAGCACCACCTATATGCCAATTGTGATGGGCAATCACGAGATCACGGCCAATACGTATGTTCCTAGTTATTCTG CACTTTTTCAATTTGGGCTAAACCCTGGTTACTATGGCAACGGCTGGGATGATCAAAAAATTTATGCAATTGGGGCTGAT GCGGGAGCACACAGCGCCCGCGCTTCGCTCCCAGATAGTTTTATTGGCCAATGGGGCGCGGCGATTCGGGTTCCAGTCTT CGAATATATTTCTACTACGCTTAGTTTTCGCGAAAACACGGTCTTTTTAGGCGAGCCACGCGCTGCTTGGCGCGATACCG CCAGCTACTACAGCAACAACGGCACACCTATACAAAGCAAGCTCTGGCAAGGCATGTACGAGCCAATTTGGGATAATGGC GAGAATGGCACACCCGTCAATGATGCGAATAAATTTGCTGTGTATGTTTGGCAGATTGCCAGCACCTATGGCAAATATAT GCGCTTCTATGAAATTATCAACGAGCCAGATTATACTAACAGCGCCAGAGCTTATGCTAACCCTGGTGCGAGCGGTGGCA GTTGGTGGGATAGTGCGCCAACTCCGAATGAATTACCAAATCTGAATGCACCAATTTACAATTACATTCGTTTATTACGG ATTGCCTACACCGTGATTAAAAAGACTGATCCTGACAGTTATGTTGCGCCAGGTGGTATTGGCTATGCCTCGTTTTTGGA TGCACTGTTGCGCTATACCGATAATCCCGATGCTGGCAAAGTCAGCAGCCAATATCCATTAACTGGCGGAGCTTATTTCG ATGCCCTAAGTTATCATATTTATCCGCAATATGGTGGCTCCTATTGGGATAATGGAGTTGGCGGTTTTGTCTATGTGCGG CATAGCGACCGCATGAGCCAAGTTTTCGTCAATCAATACCAAACAATGAACGAAACTTTAGCGGCCCGCAATTACAACGG CACAACCTTTCCACGCAAGCCAAGTATCATCACTGAAACCAATGTTTCACGTAAAGCCTTCAATAATTACGCTGGCGGCG AAGAAATTCAGCGTAATTATCTGATCAAAGCCATCGTCAAAGGCCAGCAACTTGGTATTTTGCAAATTTATTGGTTTGCC ACTGGCGAGGGCGCAGATTATGCAACCGCTCAAGATGAATACCAATTAATGGGCTTTTACGAAAATCTCAAGCGTAATGC ACCTAATAATCAGATTATGACAAGCGAGGGCATTGCCAACCGCACAACCTACAATCAACTGTATGGCTGGCGCTACGATG CAACTGCAACGGCTGCATTAAATTTGCCCAGCACAATCGATGGTGCAGCGTTTCGTAAAAACAATCAATTGCGTTATGTT TTATGGGCCAAAACCACGCTTGATCGCAATGAAACTGCTAACGCCACGATTAATTTAACTGGAACTTACACCAAAGTGGC TTGGAATGGCACAAGTAGTACAGTCAGCGGCAGCAACATCCAACTAACAGGCTCGCCAATTTTCTTAACGCAACAATAA
Upstream 100 bases:
>100_bases CCCGTTTAACCAACGAGCCAATCAAAGAACAGATTCAATTTAGCCTTAAACCAACCACCGCTGATCGTTTCGGCAATTAA CAACCAACTCAGGAGGTTGT
Downstream 100 bases:
>100_bases CCGCAACTGCAAAAGCCCTTCGCCTATCGCGATAACGGCGATAACGAAGGGCTTTGATGATCAGTTACAAGCGTTATTCG CTAAATGGCAGCGTCAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MAQRAFFRLMLLLLILGSVSSLAANYLPPSTTYMPIVMGNHEITANTYVPSYSALFQFGLNPGYYGNGWDDQKIYAIGAD AGAHSARASLPDSFIGQWGAAIRVPVFEYISTTLSFRENTVFLGEPRAAWRDTASYYSNNGTPIQSKLWQGMYEPIWDNG ENGTPVNDANKFAVYVWQIASTYGKYMRFYEIINEPDYTNSARAYANPGASGGSWWDSAPTPNELPNLNAPIYNYIRLLR IAYTVIKKTDPDSYVAPGGIGYASFLDALLRYTDNPDAGKVSSQYPLTGGAYFDALSYHIYPQYGGSYWDNGVGGFVYVR HSDRMSQVFVNQYQTMNETLAARNYNGTTFPRKPSIITETNVSRKAFNNYAGGEEIQRNYLIKAIVKGQQLGILQIYWFA TGEGADYATAQDEYQLMGFYENLKRNAPNNQIMTSEGIANRTTYNQLYGWRYDATATAALNLPSTIDGAAFRKNNQLRYV LWAKTTLDRNETANATINLTGTYTKVAWNGTSSTVSGSNIQLTGSPIFLTQQ
Sequences:
>Translated_532_residues MAQRAFFRLMLLLLILGSVSSLAANYLPPSTTYMPIVMGNHEITANTYVPSYSALFQFGLNPGYYGNGWDDQKIYAIGAD AGAHSARASLPDSFIGQWGAAIRVPVFEYISTTLSFRENTVFLGEPRAAWRDTASYYSNNGTPIQSKLWQGMYEPIWDNG ENGTPVNDANKFAVYVWQIASTYGKYMRFYEIINEPDYTNSARAYANPGASGGSWWDSAPTPNELPNLNAPIYNYIRLLR IAYTVIKKTDPDSYVAPGGIGYASFLDALLRYTDNPDAGKVSSQYPLTGGAYFDALSYHIYPQYGGSYWDNGVGGFVYVR HSDRMSQVFVNQYQTMNETLAARNYNGTTFPRKPSIITETNVSRKAFNNYAGGEEIQRNYLIKAIVKGQQLGILQIYWFA TGEGADYATAQDEYQLMGFYENLKRNAPNNQIMTSEGIANRTTYNQLYGWRYDATATAALNLPSTIDGAAFRKNNQLRYV LWAKTTLDRNETANATINLTGTYTKVAWNGTSSTVSGSNIQLTGSPIFLTQQ >Mature_531_residues AQRAFFRLMLLLLILGSVSSLAANYLPPSTTYMPIVMGNHEITANTYVPSYSALFQFGLNPGYYGNGWDDQKIYAIGADA GAHSARASLPDSFIGQWGAAIRVPVFEYISTTLSFRENTVFLGEPRAAWRDTASYYSNNGTPIQSKLWQGMYEPIWDNGE NGTPVNDANKFAVYVWQIASTYGKYMRFYEIINEPDYTNSARAYANPGASGGSWWDSAPTPNELPNLNAPIYNYIRLLRI AYTVIKKTDPDSYVAPGGIGYASFLDALLRYTDNPDAGKVSSQYPLTGGAYFDALSYHIYPQYGGSYWDNGVGGFVYVRH SDRMSQVFVNQYQTMNETLAARNYNGTTFPRKPSIITETNVSRKAFNNYAGGEEIQRNYLIKAIVKGQQLGILQIYWFAT GEGADYATAQDEYQLMGFYENLKRNAPNNQIMTSEGIANRTTYNQLYGWRYDATATAALNLPSTIDGAAFRKNNQLRYVL WAKTTLDRNETANATINLTGTYTKVAWNGTSSTVSGSNIQLTGSPIFLTQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59280; Mature: 59148
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRAFFRLMLLLLILGSVSSLAANYLPPSTTYMPIVMGNHEITANTYVPSYSALFQFGL CCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHCCC NPGYYGNGWDDQKIYAIGADAGAHSARASLPDSFIGQWGAAIRVPVFEYISTTLSFRENT CCCCCCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHCCCCEEECHHHHHHHHHHHHCCCE VFLGEPRAAWRDTASYYSNNGTPIQSKLWQGMYEPIWDNGENGTPVNDANKFAVYVWQIA EEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHCCCCCCCCCCCCCCCEEEEEEHHH STYGKYMRFYEIINEPDYTNSARAYANPGASGGSWWDSAPTPNELPNLNAPIYNYIRLLR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IAYTVIKKTDPDSYVAPGGIGYASFLDALLRYTDNPDAGKVSSQYPLTGGAYFDALSYHI HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEEEEE YPQYGGSYWDNGVGGFVYVRHSDRMSQVFVNQYQTMNETLAARNYNGTTFPRKPSIITET EECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC NVSRKAFNNYAGGEEIQRNYLIKAIVKGQQLGILQIYWFATGEGADYATAQDEYQLMGFY CCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHH ENLKRNAPNNQIMTSEGIANRTTYNQLYGWRYDATATAALNLPSTIDGAAFRKNNQLRYV HHHHCCCCCCCEEECCCCCCCCCHHHHCCEEECCCEEEEECCCCCCCCHHEECCCCEEEE LWAKTTLDRNETANATINLTGTYTKVAWNGTSSTVSGSNIQLTGSPIFLTQQ EEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEEECCEEEEECC >Mature Secondary Structure AQRAFFRLMLLLLILGSVSSLAANYLPPSTTYMPIVMGNHEITANTYVPSYSALFQFGL CHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHCCC NPGYYGNGWDDQKIYAIGADAGAHSARASLPDSFIGQWGAAIRVPVFEYISTTLSFRENT CCCCCCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHCCCCEEECHHHHHHHHHHHHCCCE VFLGEPRAAWRDTASYYSNNGTPIQSKLWQGMYEPIWDNGENGTPVNDANKFAVYVWQIA EEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHCCCCCCCCCCCCCCCEEEEEEHHH STYGKYMRFYEIINEPDYTNSARAYANPGASGGSWWDSAPTPNELPNLNAPIYNYIRLLR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IAYTVIKKTDPDSYVAPGGIGYASFLDALLRYTDNPDAGKVSSQYPLTGGAYFDALSYHI HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEEEEE YPQYGGSYWDNGVGGFVYVRHSDRMSQVFVNQYQTMNETLAARNYNGTTFPRKPSIITET EECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC NVSRKAFNNYAGGEEIQRNYLIKAIVKGQQLGILQIYWFATGEGADYATAQDEYQLMGFY CCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHH ENLKRNAPNNQIMTSEGIANRTTYNQLYGWRYDATATAALNLPSTIDGAAFRKNNQLRYV HHHHCCCCCCCEEECCCCCCCCCHHHHCCEEECCCEEEEECCCCCCCCHHEECCCCEEEE LWAKTTLDRNETANATINLTGTYTKVAWNGTSSTVSGSNIQLTGSPIFLTQQ EEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA