Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898957

Identifier: 159898957

GI number: 159898957

Start: 3120861

End: 3122681

Strand: Direct

Name: 159898957

Synonym: Haur_2436

Alternate gene names: NA

Gene position: 3120861-3122681 (Clockwise)

Preceding gene: 159898956

Following gene: 159898958

Centisome position: 49.17

GC content: 59.53

Gene sequence:

>1821_bases
ATGGCCTATTCTAGCAGCGCTGTCAAGCTTCATGCCACGAATGCCCTGCATGCAGTGGCCGTTCGGACGTTGCGCACTCT
CGCTCATTATACCGATTGTTCGCGCCAACGTAGCCAAACTGGCCATGCTTTAGCCGCTGCGCTCCAGCGCCACTGGCAAA
CACCGCACTATCGCCAGCTGGTGCGCCGTTCCTTAACTGCCGCCGACCGAGCATTGTTGCAGGCATGGTGGCAGGGTCAG
CAGCCGTTGCCAACGCCACAAGCGCTTGATCTCTGGCGCTGGCAGGCTCCTTGGCCTACTCTGGAGCAGCTCTCGTCGGA
GCAACGCTTGGCTGCCTTAGGCTTGGTGGTGCCAATCCGCACGACCACAGGCCGCACGGTGGTCTTAATTAATGATACCA
GCCGTTGGTTACGCCGCACTCCGCCACTGCCACCAACTCCTGTTGCTGCCAGCTTGCAAGCCTTGTTTCAAGCGGTGGTC
GCGTTGCTTGCCGCCTGTGCCAATACCCCTCAACCCCGCCAAGCAGCTGGCTTGGCGCTGCATATCGCGCAATCAGCCGG
CTGGCTGGCCGATCGGCTTAATCAATGGCGCATTACGCCGCGTGGTCGGGTTTGGCTGCATAGCCCAATCGCTGAGCAAC
AACGCTTGTTACACCAACAGCTCATCACCTGTAACCCGCCTGCACGTGGCTTGGTCGCATGGCGTAGCCCCGATTGGGCG
GCATTATTTGCCGATTTGGAACGGTTGATGGAGGCCCAAGCCCAGCGGCGCAGCATGGATGTGGCTGCCTTGCTCCACGA
TCATCCAGCGTGGAATGGATTGCCAGCAGCCCAGCAGATTCGGCTCGTGCATGGTTGGTTGTGCACCGTCTTGCAACCAG
CGGGCGTGGTGAGCTTAGCCAAGGGCTGGCTCTTTTGGCATGGCTGGCAGCAGCTCGCAGCCCAAGCGCCAGCCTTCGAT
GGCCTGCGCTTGCCCAAACGTGCGGCGCTCCCCGCAGCCTTACAGGTGTGGGGATTAACTTGGGGGATGGCAACGAGCCA
TGGGTGGCGCATAACGCACGCATCGGTTACCGCTCGCTTGCAACAGGGGCTTGATCTCAATGGTTTTTGGCAGCCGATTG
ATCAGTGGTATGCTGAACGGCCCGCCCTTATTCAGGCCTTGATCGCAAAACTTCAGGCCACGCCGCCATTGCGCCTGCGT
CGCATCACACTGCTTGAGGGTAGCCCCGAAGCCGTGGCAAGCGCCCACGCCAATTGGCAGATTCAAGCCTACCTACAACC
TGGGTTTGATCAAGCCCAACGGGTGGTGTGCCAAGGGGCGGAGCAGGTGGTAGCCAAGGTGTTGGGACTACATGCCACGC
CTACGCCAAGCCTCGATACGCAGACGAGCATACAGATAATGGCCTTGCGGATTGCAGCTCAGCACCTGCCCAGCCATCGG
CTTGCCTTTAATCAGCAAGCCCAGCATCTGCTGGCCGAGCTGTCGTTTGAGCAACGGTGCATCATCGACGACGATTGGGA
ACGTCTCCAATTAAGTGATGCGCCAGACCTACTAGCGAGCAGTCAAGCGCTTGCCGTTGGGCAACAACCACGAGCGCAGA
TCACGGTTGAACAGGCTCGCCAAACATGTCGCCAAGCGATCAACAACCAGCAAAGCGTGACCGTGCGCTATTACACGCCA
GCCGAGCATCGCATCACGACGCGCACGATTCGCCCGCTCGAGCTGACCAGCACCGGGATGCGCGGTTGGTGTGAATTACG
GCAACAGGAGCGGGCTTTTCGCTTTGACCGAATCTTGGCGATTGAAGCCAATACCAGTTAA

Upstream 100 bases:

>100_bases
ATAACCCATGCCACGGAATTGATTCAATGTGTACGCAAGAAAATTATGGTAAACTAGATATGCCAGATTGATTGACATGT
GACCATCCGAAGGATTGACT

Downstream 100 bases:

>100_bases
TCAGTCCAATAGAAGATCGGGTCTTGGGTCACCACCCCATGTCCAAGAATTAACATCGCGGTCACTGCATCCTTGGGCAA
CGAATAAAAGCGAATGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 606; Mature: 605

Protein sequence:

>606_residues
MAYSSSAVKLHATNALHAVAVRTLRTLAHYTDCSRQRSQTGHALAAALQRHWQTPHYRQLVRRSLTAADRALLQAWWQGQ
QPLPTPQALDLWRWQAPWPTLEQLSSEQRLAALGLVVPIRTTTGRTVVLINDTSRWLRRTPPLPPTPVAASLQALFQAVV
ALLAACANTPQPRQAAGLALHIAQSAGWLADRLNQWRITPRGRVWLHSPIAEQQRLLHQQLITCNPPARGLVAWRSPDWA
ALFADLERLMEAQAQRRSMDVAALLHDHPAWNGLPAAQQIRLVHGWLCTVLQPAGVVSLAKGWLFWHGWQQLAAQAPAFD
GLRLPKRAALPAALQVWGLTWGMATSHGWRITHASVTARLQQGLDLNGFWQPIDQWYAERPALIQALIAKLQATPPLRLR
RITLLEGSPEAVASAHANWQIQAYLQPGFDQAQRVVCQGAEQVVAKVLGLHATPTPSLDTQTSIQIMALRIAAQHLPSHR
LAFNQQAQHLLAELSFEQRCIIDDDWERLQLSDAPDLLASSQALAVGQQPRAQITVEQARQTCRQAINNQQSVTVRYYTP
AEHRITTRTIRPLELTSTGMRGWCELRQQERAFRFDRILAIEANTS

Sequences:

>Translated_606_residues
MAYSSSAVKLHATNALHAVAVRTLRTLAHYTDCSRQRSQTGHALAAALQRHWQTPHYRQLVRRSLTAADRALLQAWWQGQ
QPLPTPQALDLWRWQAPWPTLEQLSSEQRLAALGLVVPIRTTTGRTVVLINDTSRWLRRTPPLPPTPVAASLQALFQAVV
ALLAACANTPQPRQAAGLALHIAQSAGWLADRLNQWRITPRGRVWLHSPIAEQQRLLHQQLITCNPPARGLVAWRSPDWA
ALFADLERLMEAQAQRRSMDVAALLHDHPAWNGLPAAQQIRLVHGWLCTVLQPAGVVSLAKGWLFWHGWQQLAAQAPAFD
GLRLPKRAALPAALQVWGLTWGMATSHGWRITHASVTARLQQGLDLNGFWQPIDQWYAERPALIQALIAKLQATPPLRLR
RITLLEGSPEAVASAHANWQIQAYLQPGFDQAQRVVCQGAEQVVAKVLGLHATPTPSLDTQTSIQIMALRIAAQHLPSHR
LAFNQQAQHLLAELSFEQRCIIDDDWERLQLSDAPDLLASSQALAVGQQPRAQITVEQARQTCRQAINNQQSVTVRYYTP
AEHRITTRTIRPLELTSTGMRGWCELRQQERAFRFDRILAIEANTS
>Mature_605_residues
AYSSSAVKLHATNALHAVAVRTLRTLAHYTDCSRQRSQTGHALAAALQRHWQTPHYRQLVRRSLTAADRALLQAWWQGQQ
PLPTPQALDLWRWQAPWPTLEQLSSEQRLAALGLVVPIRTTTGRTVVLINDTSRWLRRTPPLPPTPVAASLQALFQAVVA
LLAACANTPQPRQAAGLALHIAQSAGWLADRLNQWRITPRGRVWLHSPIAEQQRLLHQQLITCNPPARGLVAWRSPDWAA
LFADLERLMEAQAQRRSMDVAALLHDHPAWNGLPAAQQIRLVHGWLCTVLQPAGVVSLAKGWLFWHGWQQLAAQAPAFDG
LRLPKRAALPAALQVWGLTWGMATSHGWRITHASVTARLQQGLDLNGFWQPIDQWYAERPALIQALIAKLQATPPLRLRR
ITLLEGSPEAVASAHANWQIQAYLQPGFDQAQRVVCQGAEQVVAKVLGLHATPTPSLDTQTSIQIMALRIAAQHLPSHRL
AFNQQAQHLLAELSFEQRCIIDDDWERLQLSDAPDLLASSQALAVGQQPRAQITVEQARQTCRQAINNQQSVTVRYYTPA
EHRITTRTIRPLELTSTGMRGWCELRQQERAFRFDRILAIEANTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67777; Mature: 67646

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSSSAVKLHATNALHAVAVRTLRTLAHYTDCSRQRSQTGHALAAALQRHWQTPHYRQL
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VRRSLTAADRALLQAWWQGQQPLPTPQALDLWRWQAPWPTLEQLSSEQRLAALGLVVPIR
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHCCHHHHHHHCEEEEEE
TTTGRTVVLINDTSRWLRRTPPLPPTPVAASLQALFQAVVALLAACANTPQPRQAAGLAL
ECCCCEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEE
HIAQSAGWLADRLNQWRITPRGRVWLHSPIAEQQRLLHQQLITCNPPARGLVAWRSPDWA
EEHHHCCHHHHCCCCEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCHH
ALFADLERLMEAQAQRRSMDVAALLHDHPAWNGLPAAQQIRLVHGWLCTVLQPAGVVSLA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
KGWLFWHGWQQLAAQAPAFDGLRLPKRAALPAALQVWGLTWGMATSHGWRITHASVTARL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHH
QQGLDLNGFWQPIDQWYAERPALIQALIAKLQATPPLRLRRITLLEGSPEAVASAHANWQ
HHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHCCCCEE
IQAYLQPGFDQAQRVVCQGAEQVVAKVLGLHATPTPSLDTQTSIQIMALRIAAQHLPSHR
EEEEECCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
LAFNQQAQHLLAELSFEQRCIIDDDWERLQLSDAPDLLASSQALAVGQQPRAQITVEQAR
HHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCHHHHCCCHHCCCCCCCCEEEHHHHH
QTCRQAINNQQSVTVRYYTPAEHRITTRTIRPLELTSTGMRGWCELRQQERAFRFDRILA
HHHHHHHCCCCEEEEEEECCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHEEEE
IEANTS
EECCCC
>Mature Secondary Structure 
AYSSSAVKLHATNALHAVAVRTLRTLAHYTDCSRQRSQTGHALAAALQRHWQTPHYRQL
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VRRSLTAADRALLQAWWQGQQPLPTPQALDLWRWQAPWPTLEQLSSEQRLAALGLVVPIR
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHCCHHHHHHHCEEEEEE
TTTGRTVVLINDTSRWLRRTPPLPPTPVAASLQALFQAVVALLAACANTPQPRQAAGLAL
ECCCCEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEE
HIAQSAGWLADRLNQWRITPRGRVWLHSPIAEQQRLLHQQLITCNPPARGLVAWRSPDWA
EEHHHCCHHHHCCCCEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCHH
ALFADLERLMEAQAQRRSMDVAALLHDHPAWNGLPAAQQIRLVHGWLCTVLQPAGVVSLA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
KGWLFWHGWQQLAAQAPAFDGLRLPKRAALPAALQVWGLTWGMATSHGWRITHASVTARL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHH
QQGLDLNGFWQPIDQWYAERPALIQALIAKLQATPPLRLRRITLLEGSPEAVASAHANWQ
HHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHCCCCEE
IQAYLQPGFDQAQRVVCQGAEQVVAKVLGLHATPTPSLDTQTSIQIMALRIAAQHLPSHR
EEEEECCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
LAFNQQAQHLLAELSFEQRCIIDDDWERLQLSDAPDLLASSQALAVGQQPRAQITVEQAR
HHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCHHHHCCCHHCCCCCCCCEEEHHHHH
QTCRQAINNQQSVTVRYYTPAEHRITTRTIRPLELTSTGMRGWCELRQQERAFRFDRILA
HHHHHHHCCCCEEEEEEECCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHEEEE
IEANTS
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA