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The map label for this gene is yjgJ [C]

Identifier: 159898955

GI number: 159898955

Start: 3118357

End: 3118923

Strand: Direct

Name: yjgJ [C]

Synonym: Haur_2434

Alternate gene names: 159898955

Gene position: 3118357-3118923 (Clockwise)

Preceding gene: 159898952

Following gene: 159898956

Centisome position: 49.13

GC content: 49.21

Gene sequence:

>567_bases
ATGGATAATCGGGCTACGCTGTTAGAACAGGCCTTACAATTATTTGCCCAACGTGGCTACGACGCAATTGGCGTGCAAGA
AATTGTTGAGCACGCTGGCGTTACCAAGCCCACGCTTTACCACTACTTTGGCAGCAAACGTGGCGTATTAGAGGCATTAA
TCAACGAGCGGCTTCAGCCATTAATCGATCAGCTTGCCAATGCCACAACCCATGCCAACGATGTTCCAGCCAGTTTGGCA
GCCATTTTTCAGCTGTATTTCGATTTTGCGCAAGCAGAACCGCTGCTGTATCGTATGCAATTGGCAATGTGGTTTAGCCT
GCCCGATAATGAGGCTTTTCAAATTGTGGCGGTCGCTGCGGCCCAACAACAAGCCTTGCTCGAAAGCTTTTTTGTCCGAG
CCAGCAGCTTTCATGGCAATATACGCGGTCGTCAACGGGTCTATGCCGCTACCTTGCTAGGCACAATCAACACCTACATT
GGGTTATGGCTCAGTGGCGCAATTCAGGCAACGCCGCACATCATTCACCAAGCAGTTCAGCAATTTTCATATGGCATTTA
TTCCTAA

Upstream 100 bases:

>100_bases
CGATAAACCACACGGCCTGCCTTAGCAATCCATGCTTAAACCGATTACTTGACAAGTAGATCATTTCTCTCTATACTCAT
CGGTATAGAGAAAGGTTACC

Downstream 100 bases:

>100_bases
ATTTTTTTAGCCATCACACTATACCGATTGGTATACAGGAGAAGTTATGCATCCATGGGCCAACGACGTACAATGTTATC
AAATTTATCCCTTAGGGCTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MDNRATLLEQALQLFAQRGYDAIGVQEIVEHAGVTKPTLYHYFGSKRGVLEALINERLQPLIDQLANATTHANDVPASLA
AIFQLYFDFAQAEPLLYRMQLAMWFSLPDNEAFQIVAVAAAQQQALLESFFVRASSFHGNIRGRQRVYAATLLGTINTYI
GLWLSGAIQATPHIIHQAVQQFSYGIYS

Sequences:

>Translated_188_residues
MDNRATLLEQALQLFAQRGYDAIGVQEIVEHAGVTKPTLYHYFGSKRGVLEALINERLQPLIDQLANATTHANDVPASLA
AIFQLYFDFAQAEPLLYRMQLAMWFSLPDNEAFQIVAVAAAQQQALLESFFVRASSFHGNIRGRQRVYAATLLGTINTYI
GLWLSGAIQATPHIIHQAVQQFSYGIYS
>Mature_188_residues
MDNRATLLEQALQLFAQRGYDAIGVQEIVEHAGVTKPTLYHYFGSKRGVLEALINERLQPLIDQLANATTHANDVPASLA
AIFQLYFDFAQAEPLLYRMQLAMWFSLPDNEAFQIVAVAAAQQQALLESFFVRASSFHGNIRGRQRVYAATLLGTINTYI
GLWLSGAIQATPHIIHQAVQQFSYGIYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20960; Mature: 20960

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRATLLEQALQLFAQRGYDAIGVQEIVEHAGVTKPTLYHYFGSKRGVLEALINERLQP
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
LIDQLANATTHANDVPASLAAIFQLYFDFAQAEPLLYRMQLAMWFSLPDNEAFQIVAVAA
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
AQQQALLESFFVRASSFHGNIRGRQRVYAATLLGTINTYIGLWLSGAIQATPHIIHQAVQ
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QFSYGIYS
HHHCCCCC
>Mature Secondary Structure
MDNRATLLEQALQLFAQRGYDAIGVQEIVEHAGVTKPTLYHYFGSKRGVLEALINERLQP
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
LIDQLANATTHANDVPASLAAIFQLYFDFAQAEPLLYRMQLAMWFSLPDNEAFQIVAVAA
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
AQQQALLESFFVRASSFHGNIRGRQRVYAATLLGTINTYIGLWLSGAIQATPHIIHQAVQ
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QFSYGIYS
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA