| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898901
Identifier: 159898901
GI number: 159898901
Start: 3032703
End: 3033107
Strand: Direct
Name: 159898901
Synonym: Haur_2380
Alternate gene names: NA
Gene position: 3032703-3033107 (Clockwise)
Preceding gene: 159898893
Following gene: 159898903
Centisome position: 47.78
GC content: 52.35
Gene sequence:
>405_bases ATGACAATGTACTCACGCCAGATTGATGCGCAGACCCGTACTGCGCAATTCTCCTATGATCCACGTGGGATCTTATGGAT CATCTCGCTCCCTGCAGCCCAAGAATCGCCTGCTGACGCGACTGAAAATGTAGCAGTCATGCAACGGCTCTTGGCGAATC GGCCAAATAGTGCGGTTATTCTCGATATGCGAGCCTTAGAAGCGATCGATCGCGAAGCTCGCCATATTTACACCAGCGGC GATACAAAATTCCCCACGCGAGCCTTGGCGATCGTGGTCGAATCGGCAACCAGCCGCATCACTGGCAATCTCTATATGAC GATAAGCCGTGGGAGTGGCCGCCCAACCCGCATGTTTCAAACTCCTGCCGATGCTGAAATTTGGGCGGTTAATCAACTTA ACTAA
Upstream 100 bases:
>100_bases AACCGCGCTTATCCTACCCGTGATCAGCGAATGCTGCAACTGATGGCCCTGTTTTTGCCGTCATATTCGCATCACAAACC CTAGTTCGGAGCCTTTTCGC
Downstream 100 bases:
>100_bases TTAAAAAGTGTTAGGCGAGGGGATGCTAGCTAGCCTAGCATCCCCTTTAGTGGTTAAAGAGCCACTCTTTTGCAATCATG GCAAGCTCTGATCTAGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTMYSRQIDAQTRTAQFSYDPRGILWIISLPAAQESPADATENVAVMQRLLANRPNSAVILDMRALEAIDREARHIYTSG DTKFPTRALAIVVESATSRITGNLYMTISRGSGRPTRMFQTPADAEIWAVNQLN
Sequences:
>Translated_134_residues MTMYSRQIDAQTRTAQFSYDPRGILWIISLPAAQESPADATENVAVMQRLLANRPNSAVILDMRALEAIDREARHIYTSG DTKFPTRALAIVVESATSRITGNLYMTISRGSGRPTRMFQTPADAEIWAVNQLN >Mature_133_residues TMYSRQIDAQTRTAQFSYDPRGILWIISLPAAQESPADATENVAVMQRLLANRPNSAVILDMRALEAIDREARHIYTSGD TKFPTRALAIVVESATSRITGNLYMTISRGSGRPTRMFQTPADAEIWAVNQLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14916; Mature: 14785
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMYSRQIDAQTRTAQFSYDPRGILWIISLPAAQESPADATENVAVMQRLLANRPNSAVI CCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE LDMRALEAIDREARHIYTSGDTKFPTRALAIVVESATSRITGNLYMTISRGSGRPTRMFQ EEHHHHHHHHHHHHEEEECCCCCCCCEEEEEEEECCCCEEECEEEEEEECCCCCCCEEEE TPADAEIWAVNQLN CCCCCEEEEEECCC >Mature Secondary Structure TMYSRQIDAQTRTAQFSYDPRGILWIISLPAAQESPADATENVAVMQRLLANRPNSAVI CCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE LDMRALEAIDREARHIYTSGDTKFPTRALAIVVESATSRITGNLYMTISRGSGRPTRMFQ EEHHHHHHHHHHHHEEEECCCCCCCCEEEEEEEECCCCEEECEEEEEEECCCCCCCEEEE TPADAEIWAVNQLN CCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA