| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is cenA [H]
Identifier: 159898893
GI number: 159898893
Start: 3021359
End: 3023887
Strand: Direct
Name: cenA [H]
Synonym: Haur_2372
Alternate gene names: 159898893
Gene position: 3021359-3023887 (Clockwise)
Preceding gene: 159898889
Following gene: 159898901
Centisome position: 47.61
GC content: 51.32
Gene sequence:
>2529_bases ATGCTACGACGAATGTATGCTCGTGGAACATTGTTGGTATTGTTGATCGCCTTGATCAGCCTTAGCGTTGCACATCGCAC GGCTACGCCCAGCGCGGCAGCGGCCAGTTGCGTGGTCAGCTATAAGGTGATCAATCAATGGGCCGATGGGTTTATTGGCG ATGTGACCGTTACCAATAATTTGGCAGCAACCACAACTTGGCAGTTAAGCTGGACGTTTGCTGGCAATCAGCGGATTGTT AATCTGTGGAATGGCGTTTTGACCCAAACTAACGCCGCCGTCAGTGTGCAAAATGCCGCTTGGAATGGCTCGATCACCAG CGGTGGCAGCGTTAATGTTGGCTTTCAAGCAACATTCAGTGGCACGAATAGTATTCCCACGAGTTTTACCCTGAATGGGG TGGTTTGTGGCGAAACTAACGTAACGATCACACCGCCAACCAGTAACCCAACCAACACGGCGACGGCGCGGCCCCCAACT AACACCCCAATGCCCCCAACTGGCACTCCGCGTCCATCGAATACCCCAACGATTGCTCCAACTACCCCAACCGCAACGCC CAACAACAATGGCTGTATTGGCGCAATTATCTGCGACGATTTTGAAAACCAAACCGGCATTGATCCCAGTGGATTTTGGC AAGCGCTCTATCCTGATTGTACTGGCCATGGCTCAGTGATGGTCGATAACACCTATGCCAATAGCGGCAGCAAATCGATC ATGGTTCATGGGCATAGTAATTTCTGTGATCATGCCTTTTTCGGCAATACCACGGCGATCGAAAGCATTGGCAATCTGTT GTATGGCCGCTTTTATGTGCGCCAAGATTTAGCTTTGCCCGACCATCACATCACATTAATGGCGCTCAAAGATCGCAACG ACGCTGATAATGATTTGCGCTTGGGCGGCCAGCAAGGGGTGCTCGATTGGAATCGCGAATCGGATGATGCAACCGCCCCA TCGATGAGCAGCGCAGGCATCGCCAAATCGGTCACGATTCCACCTCGTCAGTGGACATGCGTCGAATTCAAGATCGATAG TGCCAATGGCTATTTGCAGGCCTGGGTCAACGGCAGCGAAGTTGAAGGCATGCGGGTTGATGGGGTCGATACGCCTGATA TTGACCAAGCTTGGCGTACTCGTGCCAATTGGCAACCACGCTTAGTTGATATTCGGTTGGGTTGGGAAAGCTACGGCGGC GATGATATTACCCATAATATTTGGTTTGATGATGTGGCCCTGGCAACTCAACGTATCGGCTGTAGCGCTAGCAACCCAAC TACGCCGACCGCTACTCCGCGCCCAACCAACACCACCACGCCCGTGGTTGGCACGCTCACGCCTAGCCCAATTCCCAGTG CAACGCCAACCATCGCGCCCAATGGCATTACTGCTGCTACCACGATTGCCGAGCTTTGCCCAACCTACCGCCAACTCTAT ATCGATCGTGATTTTCTCGATTATTTGCCGAGCGACGGCAGTGGCGGCCATAACAACATGCCAGTTGATGGCGGCATGAC TGATGCCCAAAAAGCTAGTTTATACGGCGTGAATATCAGCGCCATTCAAAGCAAAATTGGCAATGGCACATTAACTTTGG GCGAATTGGGAACCCAAGCCTTGGGCCATGTGCAACGCTTAGTCAATCAAAATTTCCCCAAAAATGCGATTTGTCAGTTG TTGCCACGCTTGATGCTGCTAGGGCCGGAGACCGAAACCGCTACCTTCCACAAAAATAGCAGCAATCCATGGGCTGAAAC CGCTGGCCCCGTCAATGCGATTGCCCCCGCTGGATTTATGCAAACCCGCTGGCCAACTGATGCTCGTACCTATGTGCCAG CCGAAAAAGCCGAACGCGACCGTTGCCACGATCAGCCAGTGCATGAAAATAATCTTGGCTGGACATTTAGCTCGATCGTT GATCCGAGTATTTTGTATGATCCAAATAATCCAGTGTTGAACGCAATTCGCACGAGTACCCACCCAATCAGTGGCTTGCC GATGGGGCCAGGCTTTAGCAGTAATGCGCCGATGCAGGCAACGACCAAACTGCACGAGGAAAATTCGGGTTTCTGGTATC AGGTGATTCAGTTCAAAAATACCAGTACTATTCCCTATTACCTCGATTGTGCCATGATTTGGTGGGTCGGGCCATCGGGC TTATCGTTTGATTTACGTAATGGTCATTATAATAATGAACAACGCCCTGGCCGTGGCTATGGTCACCCACAGCGCGATAT CATCGAAGTGGTGTACAATCAAACACAAAAGCTCTCGGTGTATAGCATTCGTTTGTCGTTCCACGATGAGCCGTACAACA TGCGCACGGCCTACCCCAACCAATATTGGTCGTTGGAAGTTGGCACGCCCGCCTTTTTGAATGGACAGGCGCGTTATACC ACCTCAGCCGAACGCCAAGCCTTGATGGATTTGATGCTCAACACATTGCATGTCGAGCTTGAAACCAACCTTGATCGCAA TATTGAGCTATTCGATGCCCTGAAGATGCGTAATCGGGTTTCGAATTAG
Upstream 100 bases:
>100_bases CTTGTTTCTTTGAATTTGAGACCGATTCCAAGAATGCAAGCCGAAGCTGTTGGGTTAGCACTGTTGCAACTCATCGCATA TCGCAAGGAGGCGCAAGCTT
Downstream 100 bases:
>100_bases CAATTAGGTGTAATGGTTCATTGGATTGCCAACTAGTTCCGTTCCCTCATCCCCAGCCCCTCTCCCACTGAGGCGGGAGA GGGGTGCTCCACCCTTCATG
Product: cellulose-binding family II protein
Products: NA
Alternate protein names: Cellulase A; Endo-1,4-beta-glucanase A [H]
Number of amino acids: Translated: 842; Mature: 842
Protein sequence:
>842_residues MLRRMYARGTLLVLLIALISLSVAHRTATPSAAAASCVVSYKVINQWADGFIGDVTVTNNLAATTTWQLSWTFAGNQRIV NLWNGVLTQTNAAVSVQNAAWNGSITSGGSVNVGFQATFSGTNSIPTSFTLNGVVCGETNVTITPPTSNPTNTATARPPT NTPMPPTGTPRPSNTPTIAPTTPTATPNNNGCIGAIICDDFENQTGIDPSGFWQALYPDCTGHGSVMVDNTYANSGSKSI MVHGHSNFCDHAFFGNTTAIESIGNLLYGRFYVRQDLALPDHHITLMALKDRNDADNDLRLGGQQGVLDWNRESDDATAP SMSSAGIAKSVTIPPRQWTCVEFKIDSANGYLQAWVNGSEVEGMRVDGVDTPDIDQAWRTRANWQPRLVDIRLGWESYGG DDITHNIWFDDVALATQRIGCSASNPTTPTATPRPTNTTTPVVGTLTPSPIPSATPTIAPNGITAATTIAELCPTYRQLY IDRDFLDYLPSDGSGGHNNMPVDGGMTDAQKASLYGVNISAIQSKIGNGTLTLGELGTQALGHVQRLVNQNFPKNAICQL LPRLMLLGPETETATFHKNSSNPWAETAGPVNAIAPAGFMQTRWPTDARTYVPAEKAERDRCHDQPVHENNLGWTFSSIV DPSILYDPNNPVLNAIRTSTHPISGLPMGPGFSSNAPMQATTKLHEENSGFWYQVIQFKNTSTIPYYLDCAMIWWVGPSG LSFDLRNGHYNNEQRPGRGYGHPQRDIIEVVYNQTQKLSVYSIRLSFHDEPYNMRTAYPNQYWSLEVGTPAFLNGQARYT TSAERQALMDLMLNTLHVELETNLDRNIELFDALKMRNRVSN
Sequences:
>Translated_842_residues MLRRMYARGTLLVLLIALISLSVAHRTATPSAAAASCVVSYKVINQWADGFIGDVTVTNNLAATTTWQLSWTFAGNQRIV NLWNGVLTQTNAAVSVQNAAWNGSITSGGSVNVGFQATFSGTNSIPTSFTLNGVVCGETNVTITPPTSNPTNTATARPPT NTPMPPTGTPRPSNTPTIAPTTPTATPNNNGCIGAIICDDFENQTGIDPSGFWQALYPDCTGHGSVMVDNTYANSGSKSI MVHGHSNFCDHAFFGNTTAIESIGNLLYGRFYVRQDLALPDHHITLMALKDRNDADNDLRLGGQQGVLDWNRESDDATAP SMSSAGIAKSVTIPPRQWTCVEFKIDSANGYLQAWVNGSEVEGMRVDGVDTPDIDQAWRTRANWQPRLVDIRLGWESYGG DDITHNIWFDDVALATQRIGCSASNPTTPTATPRPTNTTTPVVGTLTPSPIPSATPTIAPNGITAATTIAELCPTYRQLY IDRDFLDYLPSDGSGGHNNMPVDGGMTDAQKASLYGVNISAIQSKIGNGTLTLGELGTQALGHVQRLVNQNFPKNAICQL LPRLMLLGPETETATFHKNSSNPWAETAGPVNAIAPAGFMQTRWPTDARTYVPAEKAERDRCHDQPVHENNLGWTFSSIV DPSILYDPNNPVLNAIRTSTHPISGLPMGPGFSSNAPMQATTKLHEENSGFWYQVIQFKNTSTIPYYLDCAMIWWVGPSG LSFDLRNGHYNNEQRPGRGYGHPQRDIIEVVYNQTQKLSVYSIRLSFHDEPYNMRTAYPNQYWSLEVGTPAFLNGQARYT TSAERQALMDLMLNTLHVELETNLDRNIELFDALKMRNRVSN >Mature_842_residues MLRRMYARGTLLVLLIALISLSVAHRTATPSAAAASCVVSYKVINQWADGFIGDVTVTNNLAATTTWQLSWTFAGNQRIV NLWNGVLTQTNAAVSVQNAAWNGSITSGGSVNVGFQATFSGTNSIPTSFTLNGVVCGETNVTITPPTSNPTNTATARPPT NTPMPPTGTPRPSNTPTIAPTTPTATPNNNGCIGAIICDDFENQTGIDPSGFWQALYPDCTGHGSVMVDNTYANSGSKSI MVHGHSNFCDHAFFGNTTAIESIGNLLYGRFYVRQDLALPDHHITLMALKDRNDADNDLRLGGQQGVLDWNRESDDATAP SMSSAGIAKSVTIPPRQWTCVEFKIDSANGYLQAWVNGSEVEGMRVDGVDTPDIDQAWRTRANWQPRLVDIRLGWESYGG DDITHNIWFDDVALATQRIGCSASNPTTPTATPRPTNTTTPVVGTLTPSPIPSATPTIAPNGITAATTIAELCPTYRQLY IDRDFLDYLPSDGSGGHNNMPVDGGMTDAQKASLYGVNISAIQSKIGNGTLTLGELGTQALGHVQRLVNQNFPKNAICQL LPRLMLLGPETETATFHKNSSNPWAETAGPVNAIAPAGFMQTRWPTDARTYVPAEKAERDRCHDQPVHENNLGWTFSSIV DPSILYDPNNPVLNAIRTSTHPISGLPMGPGFSSNAPMQATTKLHEENSGFWYQVIQFKNTSTIPYYLDCAMIWWVGPSG LSFDLRNGHYNNEQRPGRGYGHPQRDIIEVVYNQTQKLSVYSIRLSFHDEPYNMRTAYPNQYWSLEVGTPAFLNGQARYT TSAERQALMDLMLNTLHVELETNLDRNIELFDALKMRNRVSN
Specific function: The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes:(1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the dissaccharide cellobiose from the non-reducing e
COG id: COG3979
COG function: function code R; Uncharacterized protein contain chitin-binding domain type 3
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CBM2 (carbohydrate binding type-2) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016288 - InterPro: IPR008965 - InterPro: IPR012291 - InterPro: IPR018366 - InterPro: IPR001919 - InterPro: IPR001524 - InterPro: IPR006311 [H]
Pfam domain/function: PF00553 CBM_2; PF01341 Glyco_hydro_6 [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 91768; Mature: 91768
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00561 CBD_BACTERIAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRMYARGTLLVLLIALISLSVAHRTATPSAAAASCVVSYKVINQWADGFIGDVTVTNN CCCCHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC LAATTTWQLSWTFAGNQRIVNLWNGVLTQTNAAVSVQNAAWNGSITSGGSVNVGFQATFS EEEEEEEEEEEEEECCCEEEEEHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEC GTNSIPTSFTLNGVVCGETNVTITPPTSNPTNTATARPPTNTPMPPTGTPRPSNTPTIAP CCCCCCCEEEECEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC TTPTATPNNNGCIGAIICDDFENQTGIDPSGFWQALYPDCTGHGSVMVDNTYANSGSKSI CCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHEECCCCCCCCCEEEECCCCCCCCCEE MVHGHSNFCDHAFFGNTTAIESIGNLLYGRFYVRQDLALPDHHITLMALKDRNDADNDLR EEECCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCCEE LGGQQGVLDWNRESDDATAPSMSSAGIAKSVTIPPRQWTCVEFKIDSANGYLQAWVNGSE ECCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEEECCCC VEGMRVDGVDTPDIDQAWRTRANWQPRLVDIRLGWESYGGDDITHNIWFDDVALATQRIG CCCEEECCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHCC CSASNPTTPTATPRPTNTTTPVVGTLTPSPIPSATPTIAPNGITAATTIAELCPTYRQLY CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC IDRDFLDYLPSDGSGGHNNMPVDGGMTDAQKASLYGVNISAIQSKIGNGTLTLGELGTQA CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCEEEHHHHHHHH LGHVQRLVNQNFPKNAICQLLPRLMLLGPETETATFHKNSSNPWAETAGPVNAIAPAGFM HHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCEEEECCCCCCCHHCCCCCHHCCCCCCC QTRWPTDARTYVPAEKAERDRCHDQPVHENNLGWTFSSIVDPSILYDPNNPVLNAIRTST CCCCCCCCCEECCCHHHHHHHHCCCCCCCCCCCEEHHHHCCCEEEECCCCHHHHHHHCCC HPISGLPMGPGFSSNAPMQATTKLHEENSGFWYQVIQFKNTSTIPYYLDCAMIWWVGPSG CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCCC LSFDLRNGHYNNEQRPGRGYGHPQRDIIEVVYNQTQKLSVYSIRLSFHDEPYNMRTAYPN CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCEECCCC QYWSLEVGTPAFLNGQARYTTSAERQALMDLMLNTLHVELETNLDRNIELFDALKMRNRV CEEEEEECCCCEECCCEEECCHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHC SN CC >Mature Secondary Structure MLRRMYARGTLLVLLIALISLSVAHRTATPSAAAASCVVSYKVINQWADGFIGDVTVTNN CCCCHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC LAATTTWQLSWTFAGNQRIVNLWNGVLTQTNAAVSVQNAAWNGSITSGGSVNVGFQATFS EEEEEEEEEEEEEECCCEEEEEHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEC GTNSIPTSFTLNGVVCGETNVTITPPTSNPTNTATARPPTNTPMPPTGTPRPSNTPTIAP CCCCCCCEEEECEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC TTPTATPNNNGCIGAIICDDFENQTGIDPSGFWQALYPDCTGHGSVMVDNTYANSGSKSI CCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHEECCCCCCCCCEEEECCCCCCCCCEE MVHGHSNFCDHAFFGNTTAIESIGNLLYGRFYVRQDLALPDHHITLMALKDRNDADNDLR EEECCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCCEE LGGQQGVLDWNRESDDATAPSMSSAGIAKSVTIPPRQWTCVEFKIDSANGYLQAWVNGSE ECCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEEECCCC VEGMRVDGVDTPDIDQAWRTRANWQPRLVDIRLGWESYGGDDITHNIWFDDVALATQRIG CCCEEECCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHCC CSASNPTTPTATPRPTNTTTPVVGTLTPSPIPSATPTIAPNGITAATTIAELCPTYRQLY CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC IDRDFLDYLPSDGSGGHNNMPVDGGMTDAQKASLYGVNISAIQSKIGNGTLTLGELGTQA CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCEEEHHHHHHHH LGHVQRLVNQNFPKNAICQLLPRLMLLGPETETATFHKNSSNPWAETAGPVNAIAPAGFM HHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCEEEECCCCCCCHHCCCCCHHCCCCCCC QTRWPTDARTYVPAEKAERDRCHDQPVHENNLGWTFSSIVDPSILYDPNNPVLNAIRTST CCCCCCCCCEECCCHHHHHHHHCCCCCCCCCCCEEHHHHCCCEEEECCCCHHHHHHHCCC HPISGLPMGPGFSSNAPMQATTKLHEENSGFWYQVIQFKNTSTIPYYLDCAMIWWVGPSG CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCCC LSFDLRNGHYNNEQRPGRGYGHPQRDIIEVVYNQTQKLSVYSIRLSFHDEPYNMRTAYPN CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCEECCCC QYWSLEVGTPAFLNGQARYTTSAERQALMDLMLNTLHVELETNLDRNIELFDALKMRNRV CEEEEEECCCCEECCCEEECCHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHC SN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3023193; 2681184; 1761039 [H]