| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898882
Identifier: 159898882
GI number: 159898882
Start: 3008209
End: 3008943
Strand: Direct
Name: 159898882
Synonym: Haur_2361
Alternate gene names: NA
Gene position: 3008209-3008943 (Clockwise)
Preceding gene: 159898875
Following gene: 159898883
Centisome position: 47.4
GC content: 44.49
Gene sequence:
>735_bases ATGGCTAAATTAAACCAAATCATTGCAGTCGAAAAAGGGGTCAAAAGCCGCTCATTTTCGGAGTTGACCGAAGCCCACCA AGCTTTACAAAAACAAGCCCTTTTAGCAGGAATTAGCCGCACCTACCGCCCAAAAGATGAAGAAGGCGAACAATTACCAC CTGAATCAACCAAAGTACAAATGCGAGCCGAAGAAATTATTCGCCAAACCAGCGCCATTTTAACCCGTTTATTTGATGTG ACTGCTACCAAAGATTGGACAAATTGCGTCGCCAAAGCCGATGTGGTTGTTGATGGGCAAACCTTACTTAAAGATGTTCC AGTTGCTTATTTGCTCTTTTTAGAAAAACAATTAGTCGATTTGCAAACATTTGTGCGTAAATTACCAACGCTTGATGCTG CCGAAACCTGGAATCTTGATCAATCGAGCGATACCTGGGCAACCGAGCCAGTTCAAACCGTGCGTACCAAAAAAATTCCA CGCAACCACGTTAAAGCCGAGGCAACCGAAAAACACCCAGCCCAAGTCGAAGTCTACTATGAAGATGTGATCGTTGGCTA TTGGCGCACGATTAAATTTTCAGGTGCCTTACCAGCTCGCCGTGTCAACGAATTACTCGAACGAATCAGCAAATTGCAAC AATCAGTCAAATTTGCTCGCGAAGAAGCCAATAATACCGAAGCTGTCGAGCAAAAAGTTGGCGAACGCTTCTTGAGCTAT CTGTTTGGGGCGTAA
Upstream 100 bases:
>100_bases CAATGGCTGAGCGCAATCGGTCTGAGGGCTATGGCAAAATCACCCAAGCTTGGCTATACTGCCAACAGATTCAAATTTAT TTCGTGAGGAGGATCATCCA
Downstream 100 bases:
>100_bases CATTTAGGGTTCAGGGGCCAGCGGTTAGGGGTCAGGTGTGATCCACGAAGGACACAAAGAGCACGAAGGGTCAGGATTAA AGCATCATTCTAATGCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MAKLNQIIAVEKGVKSRSFSELTEAHQALQKQALLAGISRTYRPKDEEGEQLPPESTKVQMRAEEIIRQTSAILTRLFDV TATKDWTNCVAKADVVVDGQTLLKDVPVAYLLFLEKQLVDLQTFVRKLPTLDAAETWNLDQSSDTWATEPVQTVRTKKIP RNHVKAEATEKHPAQVEVYYEDVIVGYWRTIKFSGALPARRVNELLERISKLQQSVKFAREEANNTEAVEQKVGERFLSY LFGA
Sequences:
>Translated_244_residues MAKLNQIIAVEKGVKSRSFSELTEAHQALQKQALLAGISRTYRPKDEEGEQLPPESTKVQMRAEEIIRQTSAILTRLFDV TATKDWTNCVAKADVVVDGQTLLKDVPVAYLLFLEKQLVDLQTFVRKLPTLDAAETWNLDQSSDTWATEPVQTVRTKKIP RNHVKAEATEKHPAQVEVYYEDVIVGYWRTIKFSGALPARRVNELLERISKLQQSVKFAREEANNTEAVEQKVGERFLSY LFGA >Mature_243_residues AKLNQIIAVEKGVKSRSFSELTEAHQALQKQALLAGISRTYRPKDEEGEQLPPESTKVQMRAEEIIRQTSAILTRLFDVT ATKDWTNCVAKADVVVDGQTLLKDVPVAYLLFLEKQLVDLQTFVRKLPTLDAAETWNLDQSSDTWATEPVQTVRTKKIPR NHVKAEATEKHPAQVEVYYEDVIVGYWRTIKFSGALPARRVNELLERISKLQQSVKFAREEANNTEAVEQKVGERFLSYL FGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27689; Mature: 27558
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLNQIIAVEKGVKSRSFSELTEAHQALQKQALLAGISRTYRPKDEEGEQLPPESTKVQ CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH MRAEEIIRQTSAILTRLFDVTATKDWTNCVAKADVVVDGQTLLKDVPVAYLLFLEKQLVD HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHH LQTFVRKLPTLDAAETWNLDQSSDTWATEPVQTVRTKKIPRNHVKAEATEKHPAQVEVYY HHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCEEEEHH EDVIVGYWRTIKFSGALPARRVNELLERISKLQQSVKFAREEANNTEAVEQKVGERFLSY HHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LFGA HHCC >Mature Secondary Structure AKLNQIIAVEKGVKSRSFSELTEAHQALQKQALLAGISRTYRPKDEEGEQLPPESTKVQ CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH MRAEEIIRQTSAILTRLFDVTATKDWTNCVAKADVVVDGQTLLKDVPVAYLLFLEKQLVD HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHH LQTFVRKLPTLDAAETWNLDQSSDTWATEPVQTVRTKKIPRNHVKAEATEKHPAQVEVYY HHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCEEEEHH EDVIVGYWRTIKFSGALPARRVNELLERISKLQQSVKFAREEANNTEAVEQKVGERFLSY HHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LFGA HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA