Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898881

Identifier: 159898881

GI number: 159898881

Start: 3007476

End: 3008000

Strand: Reverse

Name: 159898881

Synonym: Haur_2360

Alternate gene names: NA

Gene position: 3008000-3007476 (Counterclockwise)

Preceding gene: 159898884

Following gene: 159898880

Centisome position: 47.4

GC content: 45.14

Gene sequence:

>525_bases
ATGCAAACGGCAACGACGATCAAAAAAGGCAATCGAACCAAAACCAATTATGTTGTCGATCTGGTGATTGGAATCAGTTT
TTTGATTGCGACTGCTCCCAATGCCACGGGCGAGCCAATTCACGAGTGGTTGAGCATGGGTTTGGCGGTGATGGTGGTAA
CCCACTTGTTATTACATTGGCAATGGATTGTGGCAATTACCAAGAAAATTTTTCGTAAAGTTGCTTGGCAACAACGGATC
AATTACATCTTAAATATTGGCTTGTTTATTGATATGACGATCATCATGTTCACCGGAATTATGATTTCTAAGACGGTTGT
ACCGCTGCTTGGGCTGGAATTGCCCAACAATATGACATGGCGCAGCTTGCACGGTCTGGCTTCGGATGCTGGCGTGTTTT
TGATTGGCTTGCACTTGGCATTGCACTGGGATTGGATTGTGCGCACCAGCAAGCGCTATTTGATTCAGCCAATCACTAAA
CGTTTCCACAAACCTGCCCCCCAATTAGCTACCAAGGAGCAATAA

Upstream 100 bases:

>100_bases
CCTCATAGATTGCTCGAAAGTTCTTCATAATCTTTGAACAATCATTTTTTATACTGCACTCAGCGATTTGAAATACCCTG
ATGCACAAAGGAATGAGTAT

Downstream 100 bases:

>100_bases
TTATGAAATTACTCGGACGTATATTAATCATTGCGCTGGCTGTGGCCTTGGTAATTGGCAGTTTGGTGGCAATTGTGCCC
AGTAGCTCGGCGGCGGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MQTATTIKKGNRTKTNYVVDLVIGISFLIATAPNATGEPIHEWLSMGLAVMVVTHLLLHWQWIVAITKKIFRKVAWQQRI
NYILNIGLFIDMTIIMFTGIMISKTVVPLLGLELPNNMTWRSLHGLASDAGVFLIGLHLALHWDWIVRTSKRYLIQPITK
RFHKPAPQLATKEQ

Sequences:

>Translated_174_residues
MQTATTIKKGNRTKTNYVVDLVIGISFLIATAPNATGEPIHEWLSMGLAVMVVTHLLLHWQWIVAITKKIFRKVAWQQRI
NYILNIGLFIDMTIIMFTGIMISKTVVPLLGLELPNNMTWRSLHGLASDAGVFLIGLHLALHWDWIVRTSKRYLIQPITK
RFHKPAPQLATKEQ
>Mature_174_residues
MQTATTIKKGNRTKTNYVVDLVIGISFLIATAPNATGEPIHEWLSMGLAVMVVTHLLLHWQWIVAITKKIFRKVAWQQRI
NYILNIGLFIDMTIIMFTGIMISKTVVPLLGLELPNNMTWRSLHGLASDAGVFLIGLHLALHWDWIVRTSKRYLIQPITK
RFHKPAPQLATKEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19821; Mature: 19821

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTATTIKKGNRTKTNYVVDLVIGISFLIATAPNATGEPIHEWLSMGLAVMVVTHLLLHW
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QWIVAITKKIFRKVAWQQRINYILNIGLFIDMTIIMFTGIMISKTVVPLLGLELPNNMTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
RSLHGLASDAGVFLIGLHLALHWDWIVRTSKRYLIQPITKRFHKPAPQLATKEQ
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQTATTIKKGNRTKTNYVVDLVIGISFLIATAPNATGEPIHEWLSMGLAVMVVTHLLLHW
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QWIVAITKKIFRKVAWQQRINYILNIGLFIDMTIIMFTGIMISKTVVPLLGLELPNNMTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
RSLHGLASDAGVFLIGLHLALHWDWIVRTSKRYLIQPITKRFHKPAPQLATKEQ
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA