Click here to switch to the map view.

The map label for this gene is yulF [H]

Identifier: 159898846

GI number: 159898846

Start: 2967480

End: 2968463

Strand: Direct

Name: yulF [H]

Synonym: Haur_2325

Alternate gene names: 159898846

Gene position: 2967480-2968463 (Clockwise)

Preceding gene: 159898842

Following gene: 159898847

Centisome position: 46.76

GC content: 50.41

Gene sequence:

>984_bases
ATGCAACAACTCAAATGGGGGCTACTCGGAACAGGCTGGATCGCTGAACAATTTGCCAATGCCTTGGCCGATTTGCCGAA
TGCCCAACGTTGGAGCGTGCTTTCGCGCAATCAAGCCTCGGCTGAAAACTTCGCCCAAACCCATCAATTTGCCCATGCCT
ATAGCGATCAGGCAGCCTTTTTGGCCGACCCCGAATTGGATGTGGTGATTATTGGTTCGCCGCACCCACGCCATGCTGAA
CAAACGATCGCCTGTTTGAATGCTGGCAAACATGTGCTGTGCGAAAAACCAATGGGCATCAACAGTCAACAAGTTGAAGC
GATGATCGCCGCAGCCCAAGCTAACCAACGCTTTTTGATGGAAGCTATGTGGATGTGGTTTCACCCTAGCACAATCAAGG
CTAAACAATTAATTGAGGCCGGGGCAATTGGCAAGCCACACCTATTCCATGCCGATTTCAGCGTACACTTCCCGTTTGAT
CCAAGCCATCGCATGTATGATCCAGCGCTTGGTGGTGGGGCATTGCTCGATATTGGGATTTACCCCTTGGCCTTGGCCTT
GTATCTTTTTGGTGCGCCAACCAGCGTTTATGGTCAAGCCCAACTTGGGCAAACTGGGGTTGATGAACAAGAAAGTATTA
TTTTGGAATATGGCGATGATCGCCAAGCCAACTGTGTTGCCAGCGTGAGAGCAGCGGGGCCATGCGAAGCAACCGTCACT
GGCAGCAGCGGCTATATTCGCTTTCAACGCAATTTTTGGCACTCGCAACAATTAGTAGTACAAAACAACGGCCAACCAAG
TGAAACCCTTGATCTGCCATTCATTGGCAATGGCTATGTTACCGAAGTTGCCCATGTGGCCGAATGTATTCAAGCAGGCT
TAATCGAAAGCCCCATTGTTTCGTGGGCAGCTTCGCGCAGCTTGATCAATACCATGGATCAATTGCGTCAAAGCTGGGGC
ATAACCTATCCCGATGAGCGTTAG

Upstream 100 bases:

>100_bases
TAGACCACGATTATGATCAAGTATTAATCGCCTGTTTAAACGTCGTTAGCCAATTACGTGGTAGCATGAGACCGGATTCA
TCGACTGTTGGAGAACATTC

Downstream 100 bases:

>100_bases
GCTTTAGCAACAATCGCTGTGATCAAGCGTACCGTATAGGCTTGATCACGGCGGCTAACGCCACAAATGATGATTTGAGG
GAAGTATGCACGATCCAATT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MQQLKWGLLGTGWIAEQFANALADLPNAQRWSVLSRNQASAENFAQTHQFAHAYSDQAAFLADPELDVVIIGSPHPRHAE
QTIACLNAGKHVLCEKPMGINSQQVEAMIAAAQANQRFLMEAMWMWFHPSTIKAKQLIEAGAIGKPHLFHADFSVHFPFD
PSHRMYDPALGGGALLDIGIYPLALALYLFGAPTSVYGQAQLGQTGVDEQESIILEYGDDRQANCVASVRAAGPCEATVT
GSSGYIRFQRNFWHSQQLVVQNNGQPSETLDLPFIGNGYVTEVAHVAECIQAGLIESPIVSWAASRSLINTMDQLRQSWG
ITYPDER

Sequences:

>Translated_327_residues
MQQLKWGLLGTGWIAEQFANALADLPNAQRWSVLSRNQASAENFAQTHQFAHAYSDQAAFLADPELDVVIIGSPHPRHAE
QTIACLNAGKHVLCEKPMGINSQQVEAMIAAAQANQRFLMEAMWMWFHPSTIKAKQLIEAGAIGKPHLFHADFSVHFPFD
PSHRMYDPALGGGALLDIGIYPLALALYLFGAPTSVYGQAQLGQTGVDEQESIILEYGDDRQANCVASVRAAGPCEATVT
GSSGYIRFQRNFWHSQQLVVQNNGQPSETLDLPFIGNGYVTEVAHVAECIQAGLIESPIVSWAASRSLINTMDQLRQSWG
ITYPDER
>Mature_327_residues
MQQLKWGLLGTGWIAEQFANALADLPNAQRWSVLSRNQASAENFAQTHQFAHAYSDQAAFLADPELDVVIIGSPHPRHAE
QTIACLNAGKHVLCEKPMGINSQQVEAMIAAAQANQRFLMEAMWMWFHPSTIKAKQLIEAGAIGKPHLFHADFSVHFPFD
PSHRMYDPALGGGALLDIGIYPLALALYLFGAPTSVYGQAQLGQTGVDEQESIILEYGDDRQANCVASVRAAGPCEATVT
GSSGYIRFQRNFWHSQQLVVQNNGQPSETLDLPFIGNGYVTEVAHVAECIQAGLIESPIVSWAASRSLINTMDQLRQSWG
ITYPDER

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=336, Percent_Identity=32.4404761904762, Blast_Score=196, Evalue=2e-50,
Organism=Escherichia coli, GI145693182, Length=329, Percent_Identity=27.9635258358663, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1787574, Length=192, Percent_Identity=27.0833333333333, Blast_Score=69, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581117, Length=331, Percent_Identity=32.6283987915408, Blast_Score=168, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24581115, Length=332, Percent_Identity=30.421686746988, Blast_Score=147, Evalue=9e-36,
Organism=Drosophila melanogaster, GI24584727, Length=333, Percent_Identity=27.9279279279279, Blast_Score=114, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35862; Mature: 35862

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLKWGLLGTGWIAEQFANALADLPNAQRWSVLSRNQASAENFAQTHQFAHAYSDQAAF
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE
LADPELDVVIIGSPHPRHAEQTIACLNAGKHVLCEKPMGINSQQVEAMIAAAQANQRFLM
EECCCCCEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHH
EAMWMWFHPSTIKAKQLIEAGAIGKPHLFHADFSVHFPFDPSHRMYDPALGGGALLDIGI
HHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECEEEECCCCCCCCCCCCCCCCCCEEHHHH
YPLALALYLFGAPTSVYGQAQLGQTGVDEQESIILEYGDDRQANCVASVRAAGPCEATVT
HHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEE
GSSGYIRFQRNFWHSQQLVVQNNGQPSETLDLPFIGNGYVTEVAHVAECIQAGLIESPIV
CCCCEEEEECCCCCCCEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHH
SWAASRSLINTMDQLRQSWGITYPDER
HHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQQLKWGLLGTGWIAEQFANALADLPNAQRWSVLSRNQASAENFAQTHQFAHAYSDQAAF
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE
LADPELDVVIIGSPHPRHAEQTIACLNAGKHVLCEKPMGINSQQVEAMIAAAQANQRFLM
EECCCCCEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHH
EAMWMWFHPSTIKAKQLIEAGAIGKPHLFHADFSVHFPFDPSHRMYDPALGGGALLDIGI
HHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECEEEECCCCCCCCCCCCCCCCCCEEHHHH
YPLALALYLFGAPTSVYGQAQLGQTGVDEQESIILEYGDDRQANCVASVRAAGPCEATVT
HHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEE
GSSGYIRFQRNFWHSQQLVVQNNGQPSETLDLPFIGNGYVTEVAHVAECIQAGLIESPIV
CCCCEEEEECCCCCCCEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHH
SWAASRSLINTMDQLRQSWGITYPDER
HHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]