Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898836

Identifier: 159898836

GI number: 159898836

Start: 2957736

End: 2958140

Strand: Reverse

Name: 159898836

Synonym: Haur_2315

Alternate gene names: NA

Gene position: 2958140-2957736 (Counterclockwise)

Preceding gene: 159898837

Following gene: 159898835

Centisome position: 46.61

GC content: 47.16

Gene sequence:

>405_bases
ATGCACCACAGCTCAACGAACGACGATATCGCAGCGATTCAGCAAGCAGCCTTGGATTATCTGGAATCTCAGCACAACCT
CGATCCTGCACAAATGCAACGTAGTATTCATCCACGCATGGTCAAACGCACATTCTGGACGCATCGGGGCACTGGCAAAC
AATATTTGCGTGAAGCGAGCGCCGAGGAAATGATTTTGCTGGCAGCTAGCTATAATCGAGATGGCGATAAATTTCCCGCA
ACACCGCGCAAAACGGTTGAAATTTTAGATGTTCAAGCGAGCGTTGCTAGCGTGAAACTTACCGCTGACGAGTGGATCGA
TTATATGCATCTGGTTAAAATCAACGATCAATGGACAGTGATTAATGTGCTGTGGGCTTATCACGATCAGGATCTTCATC
GCTAA

Upstream 100 bases:

>100_bases
AATCATGCCAACGACCGATTGACATGCACTTGGCTGGGCTACTACACTAACAGCGCTTCATGGGTGAAGCATTAGTGTTT
CTGAACAAGCGGAGTATGGA

Downstream 100 bases:

>100_bases
CTAGCATAATCAATCAGTTGCGTGGTAGCGCTTGGATGCTACCACGTCAGCTAATAACTGCTTAACGCGCCCCATTAACG
GACGAATGCCAATCTCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MHHSSTNDDIAAIQQAALDYLESQHNLDPAQMQRSIHPRMVKRTFWTHRGTGKQYLREASAEEMILLAASYNRDGDKFPA
TPRKTVEILDVQASVASVKLTADEWIDYMHLVKINDQWTVINVLWAYHDQDLHR

Sequences:

>Translated_134_residues
MHHSSTNDDIAAIQQAALDYLESQHNLDPAQMQRSIHPRMVKRTFWTHRGTGKQYLREASAEEMILLAASYNRDGDKFPA
TPRKTVEILDVQASVASVKLTADEWIDYMHLVKINDQWTVINVLWAYHDQDLHR
>Mature_134_residues
MHHSSTNDDIAAIQQAALDYLESQHNLDPAQMQRSIHPRMVKRTFWTHRGTGKQYLREASAEEMILLAASYNRDGDKFPA
TPRKTVEILDVQASVASVKLTADEWIDYMHLVKINDQWTVINVLWAYHDQDLHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15528; Mature: 15528

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHSSTNDDIAAIQQAALDYLESQHNLDPAQMQRSIHPRMVKRTFWTHRGTGKQYLREAS
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCC
AEEMILLAASYNRDGDKFPATPRKTVEILDVQASVASVKLTADEWIDYMHLVKINDQWTV
CCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHEEEECHHHHHCEEEEEEECCCEEE
INVLWAYHDQDLHR
EHHEEHHCCCCCCC
>Mature Secondary Structure
MHHSSTNDDIAAIQQAALDYLESQHNLDPAQMQRSIHPRMVKRTFWTHRGTGKQYLREAS
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCC
AEEMILLAASYNRDGDKFPATPRKTVEILDVQASVASVKLTADEWIDYMHLVKINDQWTV
CCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHEEEECHHHHHCEEEEEEECCCEEE
INVLWAYHDQDLHR
EHHEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA