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The map label for this gene is yfaL [C]

Identifier: 159898835

GI number: 159898835

Start: 2955862

End: 2957487

Strand: Reverse

Name: yfaL [C]

Synonym: Haur_2314

Alternate gene names: 159898835

Gene position: 2957487-2955862 (Counterclockwise)

Preceding gene: 159898836

Following gene: 159898834

Centisome position: 46.6

GC content: 51.23

Gene sequence:

>1626_bases
ATGCACTTTTTAAAGGTTTTGTTGATCGTTTGTTGTACGTTAGTTGCGGCAATTCAGGTTCAGGCTGCGCCCTCTGCTGG
CGTGGTTGGCACTGGTACGCCCGCTAGTTGTACCGAAGCTGCTCTGGATGCGGCGCTAACCAACGGCGGCATTATTAGCT
TTAATTGTGGTGGCGCAGCCACGATCAATCTTACAAGCGATAAAATTTTGGTTAGTTCTACCACGATTGATGGGGCAAAT
CAAATCACGCTGAGCGGGCGCAATCTCAATCGCTTGTTTGTAGCCAACGGCGCAATTCAGCTAAATCTCCGAAATTTGAC
CCTAGAAGCAGGGTTTTCGGCGGTTGGCGGCGGGGCATTGGAGTTGGTTGGAGCCGAGGTTGTGCTCGATAAGGTGATTC
TCAAAAATCATCAAGCAACCGATCAAGGCGGGGCGATCTATTGCTTTCAAGGCAGCGGCGGTAGTTTAACGATTCGCAAT
AGCAGTTTTCAGGGCAATCGCTCAGCTTCGGGCGGCGCGATTTATAACGATGGCTGCGATTTGGCTATTGACAATAGCGA
TTTTACTGCCAATATAGCTCCGACCAACACCGTTACTTCATTTGGGGGAGCGATTTATAGCGTTGGCCCAACCACGATCA
CCAACAGCCGTTTTTATCGCAATCAAGCCCGTGATGGCGGTGCGATCTTCATTCACACTCAAGCCTCAGCAACCATTCGT
TATAGCAACTTTCTCGAAAATACTGGTGGTTATGGCGGTGCGCTCGAAAACACTGGCGGACTGACGATCACCGATAGTTT
ATTGCAAGCCAACACGGTTAGTGGCACTGGCGGCGCAATTTGGAATAGCGGTGGGCGCTTGTTGCTCAAACGCTCACGCC
TGCTGGGCAATCAGGCCGATGAGGGTGGCGCAATTAGTAGCTATGGTACACACGCCGAACTCGTCGATCTATTGATCGAG
GCGAATCAAGCAACTGGCACAAATGGCGGTGGAGCAATTTACCATTCTAGCGGCACACTGTTTATCAGCAATGCTAGCCT
AATTCGTAACCAAGCAAGTGCTGGCCATGGTGGCGCAATCTACCAAAATTCCGACGACAACTTGACCCTGACCAACGTGA
CAGTCGCCGAAAATCAGGCCGATCAATTTGGTGGTGGCCTTTATCACAAAGCGCGTTATGCGGTGATTACCAACAGCACT
TTTTACAACAACACCGCTTTGGCTGGCAACGAATGGTACGAGGATTCGCCGCTGACCAGTGAGCAACCAGGCATTATTCA
AATTGGCAATAGTGTCGTGGCTGGCGCTAGCAATAATTGTGGCGGCAGCGCTGTCCAATCGTTGGGCTTCAATTTTAGCG
ATGGTACATGCGCTGGGCTCGATACGGCCAGCGATCAGCAAAATACCAATAATCTGCTGCTTTCGGCGCTCCAAGTGAAT
GGCGGGCGCGTGGCCATGCCAGTTTATACGCCGCTGACGGGCAGCCCATTAATTGATAGTGCCGATCCTAATCTTTGTCC
AACGACTGATCAACGGGGCGCGACACGAGTGGCTGGCTGTGATGTTGGCGCGGTCGAAGCGGCGGTGCAATTACCCCAAG
TTTATTTGCCATTAGCAATCCGTTAA

Upstream 100 bases:

>100_bases
ATTGCACTTTGGTTAGATTTGGTAGGAAATGTCAAGTTTTCTATCGGTGGAGCTGCTATAACTCCTTCAGAATGAGTCAA
AGCCAACTCTGGAGGAAATT

Downstream 100 bases:

>100_bases
TTGATTGTGGAGGAACCTATGCGACGTATTTCAAGTTTGATCTTGCTGATGATTCTGGTCGGCTGTGGGGTGGCTGCTCC
AGCGCCCACGAACCCTGCCG

Product: polymorphic outer membrane protein

Products: NA

Alternate protein names: Adhesin-Like Protein; Outer Membrane Adhesin Like Proteiin; Asn/Thr-Rich Large Protein Family Protein; Cadherin

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MHFLKVLLIVCCTLVAAIQVQAAPSAGVVGTGTPASCTEAALDAALTNGGIISFNCGGAATINLTSDKILVSSTTIDGAN
QITLSGRNLNRLFVANGAIQLNLRNLTLEAGFSAVGGGALELVGAEVVLDKVILKNHQATDQGGAIYCFQGSGGSLTIRN
SSFQGNRSASGGAIYNDGCDLAIDNSDFTANIAPTNTVTSFGGAIYSVGPTTITNSRFYRNQARDGGAIFIHTQASATIR
YSNFLENTGGYGGALENTGGLTITDSLLQANTVSGTGGAIWNSGGRLLLKRSRLLGNQADEGGAISSYGTHAELVDLLIE
ANQATGTNGGGAIYHSSGTLFISNASLIRNQASAGHGGAIYQNSDDNLTLTNVTVAENQADQFGGGLYHKARYAVITNST
FYNNTALAGNEWYEDSPLTSEQPGIIQIGNSVVAGASNNCGGSAVQSLGFNFSDGTCAGLDTASDQQNTNNLLLSALQVN
GGRVAMPVYTPLTGSPLIDSADPNLCPTTDQRGATRVAGCDVGAVEAAVQLPQVYLPLAIR

Sequences:

>Translated_541_residues
MHFLKVLLIVCCTLVAAIQVQAAPSAGVVGTGTPASCTEAALDAALTNGGIISFNCGGAATINLTSDKILVSSTTIDGAN
QITLSGRNLNRLFVANGAIQLNLRNLTLEAGFSAVGGGALELVGAEVVLDKVILKNHQATDQGGAIYCFQGSGGSLTIRN
SSFQGNRSASGGAIYNDGCDLAIDNSDFTANIAPTNTVTSFGGAIYSVGPTTITNSRFYRNQARDGGAIFIHTQASATIR
YSNFLENTGGYGGALENTGGLTITDSLLQANTVSGTGGAIWNSGGRLLLKRSRLLGNQADEGGAISSYGTHAELVDLLIE
ANQATGTNGGGAIYHSSGTLFISNASLIRNQASAGHGGAIYQNSDDNLTLTNVTVAENQADQFGGGLYHKARYAVITNST
FYNNTALAGNEWYEDSPLTSEQPGIIQIGNSVVAGASNNCGGSAVQSLGFNFSDGTCAGLDTASDQQNTNNLLLSALQVN
GGRVAMPVYTPLTGSPLIDSADPNLCPTTDQRGATRVAGCDVGAVEAAVQLPQVYLPLAIR
>Mature_541_residues
MHFLKVLLIVCCTLVAAIQVQAAPSAGVVGTGTPASCTEAALDAALTNGGIISFNCGGAATINLTSDKILVSSTTIDGAN
QITLSGRNLNRLFVANGAIQLNLRNLTLEAGFSAVGGGALELVGAEVVLDKVILKNHQATDQGGAIYCFQGSGGSLTIRN
SSFQGNRSASGGAIYNDGCDLAIDNSDFTANIAPTNTVTSFGGAIYSVGPTTITNSRFYRNQARDGGAIFIHTQASATIR
YSNFLENTGGYGGALENTGGLTITDSLLQANTVSGTGGAIWNSGGRLLLKRSRLLGNQADEGGAISSYGTHAELVDLLIE
ANQATGTNGGGAIYHSSGTLFISNASLIRNQASAGHGGAIYQNSDDNLTLTNVTVAENQADQFGGGLYHKARYAVITNST
FYNNTALAGNEWYEDSPLTSEQPGIIQIGNSVVAGASNNCGGSAVQSLGFNFSDGTCAGLDTASDQQNTNNLLLSALQVN
GGRVAMPVYTPLTGSPLIDSADPNLCPTTDQRGATRVAGCDVGAVEAAVQLPQVYLPLAIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55370; Mature: 55370

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFLKVLLIVCCTLVAAIQVQAAPSAGVVGTGTPASCTEAALDAALTNGGIISFNCGGAA
CHHHHHHHHHHHHHHHHEEEEECCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCEE
TINLTSDKILVSSTTIDGANQITLSGRNLNRLFVANGAIQLNLRNLTLEAGFSAVGGGAL
EEEEECCEEEEEEEECCCCCEEEEECCCCCEEEEECCEEEEEEEEEEEECCCCCCCCCEE
ELVGAEVVLDKVILKNHQATDQGGAIYCFQGSGGSLTIRNSSFQGNRSASGGAIYNDGCD
EEEHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCC
LAIDNSDFTANIAPTNTVTSFGGAIYSVGPTTITNSRFYRNQARDGGAIFIHTQASATIR
EEECCCCCEEEECCCCCCHHCCCEEEECCCCEEECCHHHHCCCCCCCEEEEEECCCEEEE
YSNFLENTGGYGGALENTGGLTITDSLLQANTVSGTGGAIWNSGGRLLLKRSRLLGNQAD
EHHHHHCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCEEECCCCEEEEEEHHHCCCCCC
EGGAISSYGTHAELVDLLIEANQATGTNGGGAIYHSSGTLFISNASLIRNQASAGHGGAI
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECHHHHHCCCCCCCCCEE
YQNSDDNLTLTNVTVAENQADQFGGGLYHKARYAVITNSTFYNNTALAGNEWYEDSPLTS
EECCCCCEEEEEEEEECCCHHHHCCCCEEEEEEEEEECCEEECCEEECCCCCCCCCCCCC
EQPGIIQIGNSVVAGASNNCGGSAVQSLGFNFSDGTCAGLDTASDQQNTNNLLLSALQVN
CCCCEEEECCEEEECCCCCCCHHHHHHCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEEC
GGRVAMPVYTPLTGSPLIDSADPNLCPTTDQRGATRVAGCDVGAVEAAVQLPQVYLPLAI
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCEEEEEEEE
R
C
>Mature Secondary Structure
MHFLKVLLIVCCTLVAAIQVQAAPSAGVVGTGTPASCTEAALDAALTNGGIISFNCGGAA
CHHHHHHHHHHHHHHHHEEEEECCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCEE
TINLTSDKILVSSTTIDGANQITLSGRNLNRLFVANGAIQLNLRNLTLEAGFSAVGGGAL
EEEEECCEEEEEEEECCCCCEEEEECCCCCEEEEECCEEEEEEEEEEEECCCCCCCCCEE
ELVGAEVVLDKVILKNHQATDQGGAIYCFQGSGGSLTIRNSSFQGNRSASGGAIYNDGCD
EEEHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCC
LAIDNSDFTANIAPTNTVTSFGGAIYSVGPTTITNSRFYRNQARDGGAIFIHTQASATIR
EEECCCCCEEEECCCCCCHHCCCEEEECCCCEEECCHHHHCCCCCCCEEEEEECCCEEEE
YSNFLENTGGYGGALENTGGLTITDSLLQANTVSGTGGAIWNSGGRLLLKRSRLLGNQAD
EHHHHHCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCEEECCCCEEEEEEHHHCCCCCC
EGGAISSYGTHAELVDLLIEANQATGTNGGGAIYHSSGTLFISNASLIRNQASAGHGGAI
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECHHHHHCCCCCCCCCEE
YQNSDDNLTLTNVTVAENQADQFGGGLYHKARYAVITNSTFYNNTALAGNEWYEDSPLTS
EECCCCCEEEEEEEEECCCHHHHCCCCEEEEEEEEEECCEEECCEEECCCCCCCCCCCCC
EQPGIIQIGNSVVAGASNNCGGSAVQSLGFNFSDGTCAGLDTASDQQNTNNLLLSALQVN
CCCCEEEECCEEEECCCCCCCHHHHHHCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEEC
GGRVAMPVYTPLTGSPLIDSADPNLCPTTDQRGATRVAGCDVGAVEAAVQLPQVYLPLAI
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCEEEEEEEE
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA