| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898834
Identifier: 159898834
GI number: 159898834
Start: 2953399
End: 2955843
Strand: Reverse
Name: 159898834
Synonym: Haur_2313
Alternate gene names: NA
Gene position: 2955843-2953399 (Counterclockwise)
Preceding gene: 159898835
Following gene: 159898831
Centisome position: 46.57
GC content: 50.96
Gene sequence:
>2445_bases ATGCGACGTATTTCAAGTTTGATCTTGCTGATGATTCTGGTCGGCTGTGGGGTGGCTGCTCCAGCGCCCACGAACCCTGC CGTAACCAGTGTGAGCGGCGAGGCCACCAATTTGCCGCCCGATTCAACCAAAACCAGTTTGCCAGTGATCATGACCGGTG ATCCGAATGCTCACCCACGTTTATGGCTAACTCAAGCCGATTTGCCGCGATTGCGAGCGTGGGCCAGTGATTCCAACCCA ATGTATCGTGATGGCTTGAAGTTGGTGGCTGAAGAGGCCAAAATTACCATGGATGCTGGCGATGTGCCAATCCGTGATTG TGGCAGCACCGAATACGAAGAGTTTCCAACCGAAATGTATGCTGAACTCTTCGCTTTTATGTCGTTGATTGATCCCAATG AGGCGGCTCGCGCCGATTATGCGCAACGAGCGCGAACCCTGTTGATGTACATCATTAATATTGCGGCGCAAGGCCCAGCT GAAAATGATGATTATCTGTGCCCTGAAACTCAATCGACAGGCTACCCGCCATTTCGTAGCCCACGCTTTTTTACCGAGGA TTCAAACCGCGCCCGTTGGCATGGCGAGGCCTTTCCCTTGGTCGTCGATTGGATTTACCCAGTCTTGAGTGCTAGCGATA AAGCGGCGATTCGCGGGGTCTTTTTACGCTGGTCAGATGAAATTGTCCAACGTGCCTATCATCATCCCGAGCCAGTTGGC GTGATCAACGATCCAAGTTTGATTGCCGATACAGCTCAAGTACGTTGGTCTGGCAATAACTATTTTGTGGCCCATATGCG CAATTTGGGCATGATGGCACTAGCATTTGATGCCAATGACGACCCAAATAATCAACTGCGCGATTATTTGAACAACGCCA CCGGTGCTTGGCTGTATATTTTTGATCATCTGACCCGTACCGATAGCAAGGGTGGCCTATTGCCGGAAGGCTTTGAGTAT AGCCCACAAACCGCCAGCTATGCGATTCAATTTCTGTTGGCTTTGCAAACCGCAGGCAAAGATACCTGTGGCCCGCACTG CAAACTGACCGAAAATCCATTTTGGGATGATTTTGTTACCAGCTACTTACACTCGTTGAGTTCCAACCCAACCGAAGATC CTAATCATGGTTTGGTCTATCAGCCAGCCTGGTATGGCGATGCCCAGAGCTATCACTTGGTCGATTTTATCAATGCCTTT GGTTCATTGGGGATTTACGATCAACGGACTGGCAATGCTGCCCGTTTGGCCAAAGTGCGCTGGATCGAAACCGTCACCCC GCCAGGTGGAGCTGAGGGCTTGATCGAACGAGTTGGCAACCCCAATGATTTTCGCGATGCCATTATCTATTTCATGCTGT TTGATCCGACGGCTGCTGTGGCAAGCGACCCACGGCCAAGCCTACCGCTGGATTTCTACGCTGAAGGCATGCACAAAATT TTCTCGCGTACCAGTTGGGCCGATGATACAGGTTGGTTCAATTTCAGCCTAAGTTGGAATTTTATCGACCATCAACAGGC CGATGGCAATCATTTTGAGTGGTTTCGCAACGGCGAATGGCTAACCAAAGCTCGCACTGGCTACGCTGATATCGCCGAGG GCATCGCCAGCTCCGAGTTTCGCAACCTGATCGCACTCGAAAATGATCAGCCTGATCGTGATCCATCCGATTGGCGGATC GATCTATGGCAACGTGGCTCACAATGGAATTTAGTGCCAACTGGTGATCCAAACTTAGTTGCACATAGCCTTGATAGCCG TTTTACCTATGCTTTGGGCGATGCAACCAACCTCTACAATAGCGAAAACGAGGCAACGACCGATATTAGCCACGCTAGTC GTTCGATTGTCTGGCTCAAACCCGACACGATTGTGACCTATGATCGTGGCACATCGCAAACCGCCAACCGCTTCAAACGC TGGTGGCTACAATTGCCCACACCAGCAACCGTTAACGGCAACCGCGCTACGATGACAACTGCTGGTGGACAGACGTTGAA TGTAACCAGTTTATTGCCAGCGGGTGCGACATTAAGCGCCGTCAACATTGCCGACCAACAATCGGAGAATACTGCGGCCA GCGACGACCCCATGAAAGTGCGATTGCGAATTGATGCTCCTGGCAACCCACAGGATGTACGCTTTTTGCAGGTATTGCAA GCTGCTAACAGTGGAGTCACGCCAGCCAACGTCAGCCTCATTCAGGCTAGTTCTGGCAATTATGCTGGGGCACAAATTGG CTCGCAGGTGGTGCTCTTCCCAATTAATCTTGATCAGGCTTTTGCCACAATCGAATATAGCACCGCGAACGCTGCCAACC TGCAATTAATCACAGGATTGCAACCAAACACGGGCTACACCGTCCAGCGCAATGGCAATAATGTCAGTATCAGCCAAGGT GGCTCGCAAATGAGCGATAGCGGTGGAGTTTTGGTAATAGAGTAA
Upstream 100 bases:
>100_bases ACGAGTGGCTGGCTGTGATGTTGGCGCGGTCGAAGCGGCGGTGCAATTACCCCAAGTTTATTTGCCATTAGCAATCCGTT AATTGATTGTGGAGGAACCT
Downstream 100 bases:
>100_bases GCCCTGATCGAACTGCCTGCGGCGTTTGCTAATGCGTTAAGCTGGGCTGGACGGAGACGAAATCTACCTGCATCGTGTGC TATGAGTGTTGTCACGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 814; Mature: 814
Protein sequence:
>814_residues MRRISSLILLMILVGCGVAAPAPTNPAVTSVSGEATNLPPDSTKTSLPVIMTGDPNAHPRLWLTQADLPRLRAWASDSNP MYRDGLKLVAEEAKITMDAGDVPIRDCGSTEYEEFPTEMYAELFAFMSLIDPNEAARADYAQRARTLLMYIINIAAQGPA ENDDYLCPETQSTGYPPFRSPRFFTEDSNRARWHGEAFPLVVDWIYPVLSASDKAAIRGVFLRWSDEIVQRAYHHPEPVG VINDPSLIADTAQVRWSGNNYFVAHMRNLGMMALAFDANDDPNNQLRDYLNNATGAWLYIFDHLTRTDSKGGLLPEGFEY SPQTASYAIQFLLALQTAGKDTCGPHCKLTENPFWDDFVTSYLHSLSSNPTEDPNHGLVYQPAWYGDAQSYHLVDFINAF GSLGIYDQRTGNAARLAKVRWIETVTPPGGAEGLIERVGNPNDFRDAIIYFMLFDPTAAVASDPRPSLPLDFYAEGMHKI FSRTSWADDTGWFNFSLSWNFIDHQQADGNHFEWFRNGEWLTKARTGYADIAEGIASSEFRNLIALENDQPDRDPSDWRI DLWQRGSQWNLVPTGDPNLVAHSLDSRFTYALGDATNLYNSENEATTDISHASRSIVWLKPDTIVTYDRGTSQTANRFKR WWLQLPTPATVNGNRATMTTAGGQTLNVTSLLPAGATLSAVNIADQQSENTAASDDPMKVRLRIDAPGNPQDVRFLQVLQ AANSGVTPANVSLIQASSGNYAGAQIGSQVVLFPINLDQAFATIEYSTANAANLQLITGLQPNTGYTVQRNGNNVSISQG GSQMSDSGGVLVIE
Sequences:
>Translated_814_residues MRRISSLILLMILVGCGVAAPAPTNPAVTSVSGEATNLPPDSTKTSLPVIMTGDPNAHPRLWLTQADLPRLRAWASDSNP MYRDGLKLVAEEAKITMDAGDVPIRDCGSTEYEEFPTEMYAELFAFMSLIDPNEAARADYAQRARTLLMYIINIAAQGPA ENDDYLCPETQSTGYPPFRSPRFFTEDSNRARWHGEAFPLVVDWIYPVLSASDKAAIRGVFLRWSDEIVQRAYHHPEPVG VINDPSLIADTAQVRWSGNNYFVAHMRNLGMMALAFDANDDPNNQLRDYLNNATGAWLYIFDHLTRTDSKGGLLPEGFEY SPQTASYAIQFLLALQTAGKDTCGPHCKLTENPFWDDFVTSYLHSLSSNPTEDPNHGLVYQPAWYGDAQSYHLVDFINAF GSLGIYDQRTGNAARLAKVRWIETVTPPGGAEGLIERVGNPNDFRDAIIYFMLFDPTAAVASDPRPSLPLDFYAEGMHKI FSRTSWADDTGWFNFSLSWNFIDHQQADGNHFEWFRNGEWLTKARTGYADIAEGIASSEFRNLIALENDQPDRDPSDWRI DLWQRGSQWNLVPTGDPNLVAHSLDSRFTYALGDATNLYNSENEATTDISHASRSIVWLKPDTIVTYDRGTSQTANRFKR WWLQLPTPATVNGNRATMTTAGGQTLNVTSLLPAGATLSAVNIADQQSENTAASDDPMKVRLRIDAPGNPQDVRFLQVLQ AANSGVTPANVSLIQASSGNYAGAQIGSQVVLFPINLDQAFATIEYSTANAANLQLITGLQPNTGYTVQRNGNNVSISQG GSQMSDSGGVLVIE >Mature_814_residues MRRISSLILLMILVGCGVAAPAPTNPAVTSVSGEATNLPPDSTKTSLPVIMTGDPNAHPRLWLTQADLPRLRAWASDSNP MYRDGLKLVAEEAKITMDAGDVPIRDCGSTEYEEFPTEMYAELFAFMSLIDPNEAARADYAQRARTLLMYIINIAAQGPA ENDDYLCPETQSTGYPPFRSPRFFTEDSNRARWHGEAFPLVVDWIYPVLSASDKAAIRGVFLRWSDEIVQRAYHHPEPVG VINDPSLIADTAQVRWSGNNYFVAHMRNLGMMALAFDANDDPNNQLRDYLNNATGAWLYIFDHLTRTDSKGGLLPEGFEY SPQTASYAIQFLLALQTAGKDTCGPHCKLTENPFWDDFVTSYLHSLSSNPTEDPNHGLVYQPAWYGDAQSYHLVDFINAF GSLGIYDQRTGNAARLAKVRWIETVTPPGGAEGLIERVGNPNDFRDAIIYFMLFDPTAAVASDPRPSLPLDFYAEGMHKI FSRTSWADDTGWFNFSLSWNFIDHQQADGNHFEWFRNGEWLTKARTGYADIAEGIASSEFRNLIALENDQPDRDPSDWRI DLWQRGSQWNLVPTGDPNLVAHSLDSRFTYALGDATNLYNSENEATTDISHASRSIVWLKPDTIVTYDRGTSQTANRFKR WWLQLPTPATVNGNRATMTTAGGQTLNVTSLLPAGATLSAVNIADQQSENTAASDDPMKVRLRIDAPGNPQDVRFLQVLQ AANSGVTPANVSLIQASSGNYAGAQIGSQVVLFPINLDQAFATIEYSTANAANLQLITGLQPNTGYTVQRNGNNVSISQG GSQMSDSGGVLVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89760; Mature: 89760
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRISSLILLMILVGCGVAAPAPTNPAVTSVSGEATNLPPDSTKTSLPVIMTGDPNAHPR CHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCE LWLTQADLPRLRAWASDSNPMYRDGLKLVAEEAKITMDAGDVPIRDCGSTEYEEFPTEMY EEEECCCCCHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHCCHHHH AELFAFMSLIDPNEAARADYAQRARTLLMYIINIAAQGPAENDDYLCPETQSTGYPPFRS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCC PRFFTEDSNRARWHGEAFPLVVDWIYPVLSASDKAAIRGVFLRWSDEIVQRAYHHPEPVG CCEECCCCCCCEECCCCCCHHHHHHHHHHCCCCCHHEEEEEEECCHHHHHHHHCCCCCCC VINDPSLIADTAQVRWSGNNYFVAHMRNLGMMALAFDANDDPNNQLRDYLNNATGAWLYI CCCCCCCEECCEEEEECCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEE FDHLTRTDSKGGLLPEGFEYSPQTASYAIQFLLALQTAGKDTCGPHCKLTENPFWDDFVT EEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHH SYLHSLSSNPTEDPNHGLVYQPAWYGDAQSYHLVDFINAFGSLGIYDQRTGNAARLAKVR HHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHEEEEE WIETVTPPGGAEGLIERVGNPNDFRDAIIYFMLFDPTAAVASDPRPSLPLDFYAEGMHKI EEEEECCCCCHHHHHHHCCCCCCHHCEEEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHH FSRTSWADDTGWFNFSLSWNFIDHQQADGNHFEWFRNGEWLTKARTGYADIAEGIASSEF HHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEECCCCEEECCCCCHHHHHHHHHHHHH RNLIALENDQPDRDPSDWRIDLWQRGSQWNLVPTGDPNLVAHSLDSRFTYALGDATNLYN HCEEEECCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEECCCCCEEEEECCCHHHCC SENEATTDISHASRSIVWLKPDTIVTYDRGTSQTANRFKRWWLQLPTPATVNGNRATMTT CCCCCHHHHHHCCCEEEEECCCEEEEECCCCCHHHHHHHHHEEECCCCCEECCCEEEEEE AGGQTLNVTSLLPAGATLSAVNIADQQSENTAASDDPMKVRLRIDAPGNPQDVRFLQVLQ CCCCEEEEHEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH AANSGVTPANVSLIQASSGNYAGAQIGSQVVLFPINLDQAFATIEYSTANAANLQLITGL HHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEECC QPNTGYTVQRNGNNVSISQGGSQMSDSGGVLVIE CCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEC >Mature Secondary Structure MRRISSLILLMILVGCGVAAPAPTNPAVTSVSGEATNLPPDSTKTSLPVIMTGDPNAHPR CHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCE LWLTQADLPRLRAWASDSNPMYRDGLKLVAEEAKITMDAGDVPIRDCGSTEYEEFPTEMY EEEECCCCCHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHCCHHHH AELFAFMSLIDPNEAARADYAQRARTLLMYIINIAAQGPAENDDYLCPETQSTGYPPFRS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCC PRFFTEDSNRARWHGEAFPLVVDWIYPVLSASDKAAIRGVFLRWSDEIVQRAYHHPEPVG CCEECCCCCCCEECCCCCCHHHHHHHHHHCCCCCHHEEEEEEECCHHHHHHHHCCCCCCC VINDPSLIADTAQVRWSGNNYFVAHMRNLGMMALAFDANDDPNNQLRDYLNNATGAWLYI CCCCCCCEECCEEEEECCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEE FDHLTRTDSKGGLLPEGFEYSPQTASYAIQFLLALQTAGKDTCGPHCKLTENPFWDDFVT EEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHH SYLHSLSSNPTEDPNHGLVYQPAWYGDAQSYHLVDFINAFGSLGIYDQRTGNAARLAKVR HHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHEEEEE WIETVTPPGGAEGLIERVGNPNDFRDAIIYFMLFDPTAAVASDPRPSLPLDFYAEGMHKI EEEEECCCCCHHHHHHHCCCCCCHHCEEEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHH FSRTSWADDTGWFNFSLSWNFIDHQQADGNHFEWFRNGEWLTKARTGYADIAEGIASSEF HHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEECCCCEEECCCCCHHHHHHHHHHHHH RNLIALENDQPDRDPSDWRIDLWQRGSQWNLVPTGDPNLVAHSLDSRFTYALGDATNLYN HCEEEECCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEECCCCCEEEEECCCHHHCC SENEATTDISHASRSIVWLKPDTIVTYDRGTSQTANRFKRWWLQLPTPATVNGNRATMTT CCCCCHHHHHHCCCEEEEECCCEEEEECCCCCHHHHHHHHHEEECCCCCEECCCEEEEEE AGGQTLNVTSLLPAGATLSAVNIADQQSENTAASDDPMKVRLRIDAPGNPQDVRFLQVLQ CCCCEEEEHEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH AANSGVTPANVSLIQASSGNYAGAQIGSQVVLFPINLDQAFATIEYSTANAANLQLITGL HHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEECC QPNTGYTVQRNGNNVSISQGGSQMSDSGGVLVIE CCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA