| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898811
Identifier: 159898811
GI number: 159898811
Start: 2929250
End: 2931430
Strand: Direct
Name: 159898811
Synonym: Haur_2290
Alternate gene names: NA
Gene position: 2929250-2931430 (Clockwise)
Preceding gene: 159898810
Following gene: 159898812
Centisome position: 46.15
GC content: 46.72
Gene sequence:
>2181_bases ATGCGTTCTACTATCCGCTTATTAATCGGTCTAGCTATTGCGGGAGTGCTCTTGCTCGGCTCACGCTTGGGGGTGAATGC CTACCAACCAGCTAGAGGCTTACCAATTGCAGGAACATGGGACACCACATTTGCCCAAAACTTGCAGCAACCAGCAACAA TCTCCTCATTGACGATCGACCAAAACGGAGATTTGTATGTGCTGGGGGATTTTCACTATGTTAATGGTCAAGCAATTAAT GGATTAACCAAATGGGATGGGACAACGTGGGAAACCTTTAACTTGGAACCCGATGATATTAATAAAATTCGCGCAGTTAC GACCTATAGCGATACGCTCTATATCGCTGGACGATTTAAGACCCTTCAACAGCAGATCCTCAATGGGGTTGCGGCTTGGA ATGACACGACCTTCCAAGCCTTAGGTTCAGGCCTCAGCGGAACGCTTGAAGAAGCCGCAGCCGAACCAATCGCCTATGCC CTGCACGTTTATAGCGATACATTGTATATTGGAGGGAACTTTAGTTTTTTTAATGGTGGTGAGTCCTATGGGATTGCCCA ATGGAATGGAGCCGGGATTGCCCAATCTGTTGAATTCAATAGTACTGTTGGCAGCTTCATCAGCACACCAGAAGGAATAA TTGCTGCTGGAGAATTCTGGACTGTTAACTTTGAACCTGCCCAGCTTGCTCGGCGTGAATACAATCGCTGGACTCCGATC AATTTTGGCTGGCCCAGCATGACACTACAAGCCTATACCATTCATGACACGCCGTATCTTGTAACACGATCACGGTATGC ACCCTATCCAAGCCAACTGTATCGTTGGCAGAATAGTCAAAGACAGCTAATTGGGCCAACTCATCCTGGGGCAATTGATA TGCTGGTTGGCTTTGATGATACGTTTTATATGCAAAGCGGGAATAAACTTTGGTTCTTAAATCAAAATCAATGGGTTCCA GCTCAATTGCCTTTCGAGATATCAAAACTTACTGCGTTAGCATCGGATGGGGAAACGCTGTACCTGGCTGGCGATTTAAC CGTTGATGGTCAATCGCGCCAATTGGTTGCGTGGGATGGCTCCACCACCCAATCACTTGGGAGCTTTGTTGGTAAACAGA ATGTACAGAGCATAACTGGGGATTTTGGGCAACCCATGATCGCGACCAAGCCGATAACTGTTAGCAATTCAGGCACGATT CAACGCTGGAATGGCAGCCAATGGAATACACTAGCCTTTGGCGATACAACTATCAGTGAAGCCCAGCTGCAAACGTTGGG ACAACGGGCGTATGTGTTGTTGAACGTTCCCCGTGCATTGAATAGTGCTGCTCCGGCCAGCAATATTTGGCATTGGGAGA ATGAGAGCTGGCAAAGTGGTGTGCTCAGCACTACTAGCTCTATTAAATGGCATCGATCGGGCCAACAATTGTTTACCGTT CTTCTTCCACTCCAATCGAATCTCCCAATTACTGGGGTAGTGGAGTTTGACGGAGAAACCTTGACCCAACGACTAGCTAT TAACTCGCTCTCGCCCTATGAGGAACAAGTTTTTGTCCATCACAATGAGTTTTACTTGCTGATTATTGCGCCATGGCAGT GGGTTGATTTTCTCCATATTTACAAATGGGATGGAATTTATTGGCAATCGCTGCCAACCCAAAGCTTAGCCAAAATTGAT CATTATTTTGCTGCATGGAACAATCAGTTGTATATGGCCAATACCGATGGTCAATTGTATCGCTTTGATCAAGCGATGCA ACCAATTCAAATCGCCCAATTTGACGGGCCGATTACTACCATGCAAAGCCTCGAAGGTGGTGGTTTATATATCGGTGGCG ATTTTATGCAGGTCGATGGCGTAACAACTGGCCCAATCGCTCGTTTTGATGGCACAACCTTTCGTGGCTTGCCAAGCTAT CCCAATGGTACAGTGCGTAAACTTGCCGTCGATTATAACCAGTTATATATAGTTGGCGACTTTAGCAAAGTCGGCCAAGT TGATTCATTAGGCGTTGCCGTATTCAGCTTTGCTACGCCAGAATTAACCCCAACACCGACCAATACGCCAACGCCCACCA GCACGCCAACGCCAACACCAACAGCGACTATTTCACCTACACCAGCAGAAATATCATATCGAGTTTATGCACCGCTTACA TGGGCTAAGCCAGAAGAATAA
Upstream 100 bases:
>100_bases TGATTAAATAGGTCGCGTGATAAGTCTGTGCGCACATTTTGTGCATAGCTTAGTATGGTAGAACTTAATTACTTGCTTAA TTGAGAGGATATCAGCAGCG
Downstream 100 bases:
>100_bases TCAAGCAGAAAGAGATCGGGCAATGAAGTTTCGCTTTCAGCCAATTGAATGTGGTGCGATTACAGCATTGATCGTTAATT ATTACAACCAACTACCCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MRSTIRLLIGLAIAGVLLLGSRLGVNAYQPARGLPIAGTWDTTFAQNLQQPATISSLTIDQNGDLYVLGDFHYVNGQAIN GLTKWDGTTWETFNLEPDDINKIRAVTTYSDTLYIAGRFKTLQQQILNGVAAWNDTTFQALGSGLSGTLEEAAAEPIAYA LHVYSDTLYIGGNFSFFNGGESYGIAQWNGAGIAQSVEFNSTVGSFISTPEGIIAAGEFWTVNFEPAQLARREYNRWTPI NFGWPSMTLQAYTIHDTPYLVTRSRYAPYPSQLYRWQNSQRQLIGPTHPGAIDMLVGFDDTFYMQSGNKLWFLNQNQWVP AQLPFEISKLTALASDGETLYLAGDLTVDGQSRQLVAWDGSTTQSLGSFVGKQNVQSITGDFGQPMIATKPITVSNSGTI QRWNGSQWNTLAFGDTTISEAQLQTLGQRAYVLLNVPRALNSAAPASNIWHWENESWQSGVLSTTSSIKWHRSGQQLFTV LLPLQSNLPITGVVEFDGETLTQRLAINSLSPYEEQVFVHHNEFYLLIIAPWQWVDFLHIYKWDGIYWQSLPTQSLAKID HYFAAWNNQLYMANTDGQLYRFDQAMQPIQIAQFDGPITTMQSLEGGGLYIGGDFMQVDGVTTGPIARFDGTTFRGLPSY PNGTVRKLAVDYNQLYIVGDFSKVGQVDSLGVAVFSFATPELTPTPTNTPTPTSTPTPTPTATISPTPAEISYRVYAPLT WAKPEE
Sequences:
>Translated_726_residues MRSTIRLLIGLAIAGVLLLGSRLGVNAYQPARGLPIAGTWDTTFAQNLQQPATISSLTIDQNGDLYVLGDFHYVNGQAIN GLTKWDGTTWETFNLEPDDINKIRAVTTYSDTLYIAGRFKTLQQQILNGVAAWNDTTFQALGSGLSGTLEEAAAEPIAYA LHVYSDTLYIGGNFSFFNGGESYGIAQWNGAGIAQSVEFNSTVGSFISTPEGIIAAGEFWTVNFEPAQLARREYNRWTPI NFGWPSMTLQAYTIHDTPYLVTRSRYAPYPSQLYRWQNSQRQLIGPTHPGAIDMLVGFDDTFYMQSGNKLWFLNQNQWVP AQLPFEISKLTALASDGETLYLAGDLTVDGQSRQLVAWDGSTTQSLGSFVGKQNVQSITGDFGQPMIATKPITVSNSGTI QRWNGSQWNTLAFGDTTISEAQLQTLGQRAYVLLNVPRALNSAAPASNIWHWENESWQSGVLSTTSSIKWHRSGQQLFTV LLPLQSNLPITGVVEFDGETLTQRLAINSLSPYEEQVFVHHNEFYLLIIAPWQWVDFLHIYKWDGIYWQSLPTQSLAKID HYFAAWNNQLYMANTDGQLYRFDQAMQPIQIAQFDGPITTMQSLEGGGLYIGGDFMQVDGVTTGPIARFDGTTFRGLPSY PNGTVRKLAVDYNQLYIVGDFSKVGQVDSLGVAVFSFATPELTPTPTNTPTPTSTPTPTPTATISPTPAEISYRVYAPLT WAKPEE >Mature_726_residues MRSTIRLLIGLAIAGVLLLGSRLGVNAYQPARGLPIAGTWDTTFAQNLQQPATISSLTIDQNGDLYVLGDFHYVNGQAIN GLTKWDGTTWETFNLEPDDINKIRAVTTYSDTLYIAGRFKTLQQQILNGVAAWNDTTFQALGSGLSGTLEEAAAEPIAYA LHVYSDTLYIGGNFSFFNGGESYGIAQWNGAGIAQSVEFNSTVGSFISTPEGIIAAGEFWTVNFEPAQLARREYNRWTPI NFGWPSMTLQAYTIHDTPYLVTRSRYAPYPSQLYRWQNSQRQLIGPTHPGAIDMLVGFDDTFYMQSGNKLWFLNQNQWVP AQLPFEISKLTALASDGETLYLAGDLTVDGQSRQLVAWDGSTTQSLGSFVGKQNVQSITGDFGQPMIATKPITVSNSGTI QRWNGSQWNTLAFGDTTISEAQLQTLGQRAYVLLNVPRALNSAAPASNIWHWENESWQSGVLSTTSSIKWHRSGQQLFTV LLPLQSNLPITGVVEFDGETLTQRLAINSLSPYEEQVFVHHNEFYLLIIAPWQWVDFLHIYKWDGIYWQSLPTQSLAKID HYFAAWNNQLYMANTDGQLYRFDQAMQPIQIAQFDGPITTMQSLEGGGLYIGGDFMQVDGVTTGPIARFDGTTFRGLPSY PNGTVRKLAVDYNQLYIVGDFSKVGQVDSLGVAVFSFATPELTPTPTNTPTPTSTPTPTPTATISPTPAEISYRVYAPLT WAKPEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80255; Mature: 80255
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS50912 EAR L=rr
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTIRLLIGLAIAGVLLLGSRLGVNAYQPARGLPIAGTWDTTFAQNLQQPATISSLTID CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEE QNGDLYVLGDFHYVNGQAINGLTKWDGTTWETFNLEPDDINKIRAVTTYSDTLYIAGRFK CCCCEEEEEEEEEECCEEECCEECCCCCEEEEECCCCCCCCCEEEEEEECCEEEEEEHHH TLQQQILNGVAAWNDTTFQALGSGLSGTLEEAAAEPIAYALHVYSDTLYIGGNFSFFNGG HHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHCCCEEEEEEEEECEEEECCCEEEECCC ESYGIAQWNGAGIAQSVEFNSTVGSFISTPEGIIAAGEFWTVNFEPAQLARREYNRWTPI CCCCEEEECCCCCEEEEECCCHHHHHHCCCCCEEEECCEEEEECCHHHHHHHHCCCCCCC NFGWPSMTLQAYTIHDTPYLVTRSRYAPYPSQLYRWQNSQRQLIGPTHPGAIDMLVGFDD CCCCCCCEEEEEEEECCCEEEECCCCCCCHHHHHHHCCCCCEECCCCCCCEEEEEEECCC TFYMQSGNKLWFLNQNQWVPAQLPFEISKLTALASDGETLYLAGDLTVDGQSRQLVAWDG EEEEECCCEEEEECCCCCCCCCCCCCHHHEEEEECCCCEEEEEEEEEECCCCCEEEEECC STTQSLGSFVGKQNVQSITGDFGQPMIATKPITVSNSGTIQRWNGSQWNTLAFGDTTISE CCHHHHHHHHCCCHHHHHHCCCCCCEEEECCEEECCCCCEEECCCCCCCEEEECCCCCCH AQLQTLGQRAYVLLNVPRALNSAAPASNIWHWENESWQSGVLSTTSSIKWHRSGQQLFTV HHHHHHCCCEEEEEECCHHHCCCCCCCCCEECCCCCCCCCCEECCCCEEEECCCCEEEEE LLPLQSNLPITGVVEFDGETLTQRLAINSLSPYEEQVFVHHNEFYLLIIAPWQWVDFLHI EEECCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCCEEEE YKWDGIYWQSLPTQSLAKIDHYFAAWNNQLYMANTDGQLYRFDQAMQPIQIAQFDGPITT EEECCEEEECCCHHHHHHHHHHHEEECCEEEEECCCCCEEEEHHHCCCEEEEECCCCHHH MQSLEGGGLYIGGDFMQVDGVTTGPIARFDGTTFRGLPSYPNGTVRKLAVDYNQLYIVGD HHHCCCCCEEECCCEEEECCCCCCCEEECCCCEECCCCCCCCCCEEEEEEECCEEEEEEC FSKVGQVDSLGVAVFSFATPELTPTPTNTPTPTSTPTPTPTATISPTPAEISYRVYAPLT HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEE WAKPEE CCCCCC >Mature Secondary Structure MRSTIRLLIGLAIAGVLLLGSRLGVNAYQPARGLPIAGTWDTTFAQNLQQPATISSLTID CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEE QNGDLYVLGDFHYVNGQAINGLTKWDGTTWETFNLEPDDINKIRAVTTYSDTLYIAGRFK CCCCEEEEEEEEEECCEEECCEECCCCCEEEEECCCCCCCCCEEEEEEECCEEEEEEHHH TLQQQILNGVAAWNDTTFQALGSGLSGTLEEAAAEPIAYALHVYSDTLYIGGNFSFFNGG HHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHCCCEEEEEEEEECEEEECCCEEEECCC ESYGIAQWNGAGIAQSVEFNSTVGSFISTPEGIIAAGEFWTVNFEPAQLARREYNRWTPI CCCCEEEECCCCCEEEEECCCHHHHHHCCCCCEEEECCEEEEECCHHHHHHHHCCCCCCC NFGWPSMTLQAYTIHDTPYLVTRSRYAPYPSQLYRWQNSQRQLIGPTHPGAIDMLVGFDD CCCCCCCEEEEEEEECCCEEEECCCCCCCHHHHHHHCCCCCEECCCCCCCEEEEEEECCC TFYMQSGNKLWFLNQNQWVPAQLPFEISKLTALASDGETLYLAGDLTVDGQSRQLVAWDG EEEEECCCEEEEECCCCCCCCCCCCCHHHEEEEECCCCEEEEEEEEEECCCCCEEEEECC STTQSLGSFVGKQNVQSITGDFGQPMIATKPITVSNSGTIQRWNGSQWNTLAFGDTTISE CCHHHHHHHHCCCHHHHHHCCCCCCEEEECCEEECCCCCEEECCCCCCCEEEECCCCCCH AQLQTLGQRAYVLLNVPRALNSAAPASNIWHWENESWQSGVLSTTSSIKWHRSGQQLFTV HHHHHHCCCEEEEEECCHHHCCCCCCCCCEECCCCCCCCCCEECCCCEEEECCCCEEEEE LLPLQSNLPITGVVEFDGETLTQRLAINSLSPYEEQVFVHHNEFYLLIIAPWQWVDFLHI EEECCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCCEEEE YKWDGIYWQSLPTQSLAKIDHYFAAWNNQLYMANTDGQLYRFDQAMQPIQIAQFDGPITT EEECCEEEECCCHHHHHHHHHHHEEECCEEEEECCCCCEEEEHHHCCCEEEEECCCCHHH MQSLEGGGLYIGGDFMQVDGVTTGPIARFDGTTFRGLPSYPNGTVRKLAVDYNQLYIVGD HHHCCCCCEEECCCEEEECCCCCCCEEECCCCEECCCCCCCCCCEEEEEEECCEEEEEEC FSKVGQVDSLGVAVFSFATPELTPTPTNTPTPTSTPTPTPTATISPTPAEISYRVYAPLT HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEE WAKPEE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA