| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898810
Identifier: 159898810
GI number: 159898810
Start: 2928176
End: 2929102
Strand: Direct
Name: 159898810
Synonym: Haur_2289
Alternate gene names: NA
Gene position: 2928176-2929102 (Clockwise)
Preceding gene: 159898808
Following gene: 159898811
Centisome position: 46.14
GC content: 40.88
Gene sequence:
>927_bases ATGTCTGCTCCACTGCTACTTATGAATCAACGGGAACTTACAAAAGATGAATTAAACTTAATTCAGGCAACAATTGATCG AAAAACAGGCAATCAAACATTACAACAATCAAATACGTCAATCCAGCAACAATCAGCAAATAAAAATACATCCAATCAAG CGACCCATTCTTCAATCTCTAATCCTAAATTGAAACTCAACGAACCAAGAGCTATTATCATAGGTGCGATAATCACCGCC TTGGCAACCATTTTAGTGATACTTAAACCTTTCGGGTTAGGTTCAAACGATACATTTAATTATCAAGTTGAGGTATTAGA TACTTCAACCAACAAGCCAATTGGCCTAGCTAAAGTGACGATAACCTTGCCAAATCTAGCACCGCTTGAGGCCTTTAGCG ATAATAACGGTTTTGCCCGACTATCCATTGGTGATCAATATAATGATCAAGCAGGAATTTTGAGGCTTGAAAAAACTGGT TACGATTCAGTAATATTTAATGTCGATATTCAAGCTGATCGCTTACCAAAACAAATCAAGCTTACTCCAAATCAATCAAA TACCCCTCAACCTACCGCGACCGAGGCAGCGGCAGCAGCAACCCCAGAGACAGGATCAGGTATACCAACAGCAGGAGGCG CTACAGCACCACTATTAATCGGCTGTTGGAATAATGATAGCAAACCGCGTAACATTACAAATATCAATATTCGCGAAAGT GCTGACGGAATTAAAATTGGGTTCAAGGCCAATTGTGCCGATAGCGCAATTACCGATGAGCAAGATGCAGTCATTTCTGC CGAGAATGAAATTAGGCTGAGCCAGGTTGATGAAACTTGGACTTTTAGCCTCAGGCCAGATGGAACCCTGCGGCTCGCAA TCGAAGGCCAAACTGGTTTTGAGGAATTAACATTTTACAAGAAATAG
Upstream 100 bases:
>100_bases ATATGACCAATTAAATCTTGAACAACTTGAAGAGTTACTAATCCAAAATCGGCGTAACCTCCATAAGCTTGAAATTCAAA TTGCCCAATATGGAGGATTA
Downstream 100 bases:
>100_bases ACACCCGCAGACTATTTATTAAGTGACTACGGCTCAATAACCACCCATGATTAAATAGGTCGCGTGATAAGTCTGTGCGC ACATTTTGTGCATAGCTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSAPLLLMNQRELTKDELNLIQATIDRKTGNQTLQQSNTSIQQQSANKNTSNQATHSSISNPKLKLNEPRAIIIGAIITA LATILVILKPFGLGSNDTFNYQVEVLDTSTNKPIGLAKVTITLPNLAPLEAFSDNNGFARLSIGDQYNDQAGILRLEKTG YDSVIFNVDIQADRLPKQIKLTPNQSNTPQPTATEAAAAATPETGSGIPTAGGATAPLLIGCWNNDSKPRNITNINIRES ADGIKIGFKANCADSAITDEQDAVISAENEIRLSQVDETWTFSLRPDGTLRLAIEGQTGFEELTFYKK
Sequences:
>Translated_308_residues MSAPLLLMNQRELTKDELNLIQATIDRKTGNQTLQQSNTSIQQQSANKNTSNQATHSSISNPKLKLNEPRAIIIGAIITA LATILVILKPFGLGSNDTFNYQVEVLDTSTNKPIGLAKVTITLPNLAPLEAFSDNNGFARLSIGDQYNDQAGILRLEKTG YDSVIFNVDIQADRLPKQIKLTPNQSNTPQPTATEAAAAATPETGSGIPTAGGATAPLLIGCWNNDSKPRNITNINIRES ADGIKIGFKANCADSAITDEQDAVISAENEIRLSQVDETWTFSLRPDGTLRLAIEGQTGFEELTFYKK >Mature_307_residues SAPLLLMNQRELTKDELNLIQATIDRKTGNQTLQQSNTSIQQQSANKNTSNQATHSSISNPKLKLNEPRAIIIGAIITAL ATILVILKPFGLGSNDTFNYQVEVLDTSTNKPIGLAKVTITLPNLAPLEAFSDNNGFARLSIGDQYNDQAGILRLEKTGY DSVIFNVDIQADRLPKQIKLTPNQSNTPQPTATEAAAAATPETGSGIPTAGGATAPLLIGCWNNDSKPRNITNINIRESA DGIKIGFKANCADSAITDEQDAVISAENEIRLSQVDETWTFSLRPDGTLRLAIEGQTGFEELTFYKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33268; Mature: 33137
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLLLMNQRELTKDELNLIQATIDRKTGNQTLQQSNTSIQQQSANKNTSNQATHSSIS CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHCCCCCCCCHHHCCCC NPKLKLNEPRAIIIGAIITALATILVILKPFGLGSNDTFNYQVEVLDTSTNKPIGLAKVT CCCEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCEEEEEEE ITLPNLAPLEAFSDNNGFARLSIGDQYNDQAGILRLEKTGYDSVIFNVDIQADRLPKQIK EECCCCCCCCEECCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCEEE LTPNQSNTPQPTATEAAAAATPETGSGIPTAGGATAPLLIGCWNNDSKPRNITNINIRES ECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEC ADGIKIGFKANCADSAITDEQDAVISAENEIRLSQVDETWTFSLRPDGTLRLAIEGQTGF CCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCEEEEEECCCCEEEEEEECCCCH EELTFYKK HHHEEECC >Mature Secondary Structure SAPLLLMNQRELTKDELNLIQATIDRKTGNQTLQQSNTSIQQQSANKNTSNQATHSSIS CCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHCCCCCCCCHHHCCCC NPKLKLNEPRAIIIGAIITALATILVILKPFGLGSNDTFNYQVEVLDTSTNKPIGLAKVT CCCEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCEEEEEEE ITLPNLAPLEAFSDNNGFARLSIGDQYNDQAGILRLEKTGYDSVIFNVDIQADRLPKQIK EECCCCCCCCEECCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCEEE LTPNQSNTPQPTATEAAAAATPETGSGIPTAGGATAPLLIGCWNNDSKPRNITNINIRES ECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEC ADGIKIGFKANCADSAITDEQDAVISAENEIRLSQVDETWTFSLRPDGTLRLAIEGQTGF CCCEEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCEEEEEECCCCEEEEEEECCCCH EELTFYKK HHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA