Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is ylxW [H]

Identifier: 159898804

GI number: 159898804

Start: 2923750

End: 2924499

Strand: Reverse

Name: ylxW [H]

Synonym: Haur_2283

Alternate gene names: 159898804

Gene position: 2924499-2923750 (Counterclockwise)

Preceding gene: 159898805

Following gene: 159898803

Centisome position: 46.08

GC content: 51.87

Gene sequence:

>750_bases
ATGCGTCAACTATTACCTCAGCATCGTGCCATTTTGTCGCTGTTCGCTTTGCTCTTTGGCGGGTTGTTTGTCGGCATGCT
CATGTCGGTACGACCCCAAGTGGCACTTTCGAGTAGTAGTAGTTCGCGCAATAGCTCAGCTAGTTTGAGCGTCGATCGCA
TCGGTACGCTGCGTGAGCATCAGCAAGAATTAAATGCTGAACTCAGCCGTTTACGCGATGAACAAGCTGAGTTGCAACAA
CAATCAACCTCCAGCCAAAGCAACTTTGAAGAAATTCGCACCCAAATCGATCAGCAGCAACAAATGGCAGCCTTGGTGGC
GATGCGCGGGCCAGGCGTGGTTGTGACTCTCAACGATAGCAACGCCAATTCGTTACCCGATGAAGTTGCCGACGTGAATC
GCTATATCATTCATCAGCAACAGCTGGTGACCTTGGTTGGCGTGCTGTGGAGCAACGGCGCTGAGGCAATTTCGATCAAC
GATCAGCGCATCACCGATCAAACCTCGATCTATTGTGTTGGCTCAACGATTTTGATCAACCAAGAGTTAATGGCCCCGCC
GTTTACGATTCGCGCAATCGGCGACCCCAACACCCTAGCTAATGCCGCCAGTAATTCGCCCTTGCTCAGCGATTTATGGA
ATCGCCAGCGCGAATTTGGCATTGGTGTCGATGTTAAGCAAAAAGCCCAAGTGCAAGTGCCAGCCTACACTGGCCCCTTG
GCCAATCGCCATCTGGAGGTTGCGCCATGA

Upstream 100 bases:

>100_bases
CCTGGTTGTGCGGGCTGAACCACTAAGCCAAGAAACTCTGACTAGCAATAATACGCGCGAATTTACCATCCGCGTCGAGC
CATAGTCTGCGGGAGCACCT

Downstream 100 bases:

>100_bases
ACCGCTTTCGCATTCGGCGCGGGATTTTGCGCCAAAGCTTGTTGACCTTGATGTGTATGTTGATTGGCTTTGCGGTAGTG
ACCCAACTGCGCACCTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRQLLPQHRAILSLFALLFGGLFVGMLMSVRPQVALSSSSSSRNSSASLSVDRIGTLREHQQELNAELSRLRDEQAELQQ
QSTSSQSNFEEIRTQIDQQQQMAALVAMRGPGVVVTLNDSNANSLPDEVADVNRYIIHQQQLVTLVGVLWSNGAEAISIN
DQRITDQTSIYCVGSTILINQELMAPPFTIRAIGDPNTLANAASNSPLLSDLWNRQREFGIGVDVKQKAQVQVPAYTGPL
ANRHLEVAP

Sequences:

>Translated_249_residues
MRQLLPQHRAILSLFALLFGGLFVGMLMSVRPQVALSSSSSSRNSSASLSVDRIGTLREHQQELNAELSRLRDEQAELQQ
QSTSSQSNFEEIRTQIDQQQQMAALVAMRGPGVVVTLNDSNANSLPDEVADVNRYIIHQQQLVTLVGVLWSNGAEAISIN
DQRITDQTSIYCVGSTILINQELMAPPFTIRAIGDPNTLANAASNSPLLSDLWNRQREFGIGVDVKQKAQVQVPAYTGPL
ANRHLEVAP
>Mature_249_residues
MRQLLPQHRAILSLFALLFGGLFVGMLMSVRPQVALSSSSSSRNSSASLSVDRIGTLREHQQELNAELSRLRDEQAELQQ
QSTSSQSNFEEIRTQIDQQQQMAALVAMRGPGVVVTLNDSNANSLPDEVADVNRYIIHQQQLVTLVGVLWSNGAEAISIN
DQRITDQTSIYCVGSTILINQELMAPPFTIRAIGDPNTLANAASNSPLLSDLWNRQREFGIGVDVKQKAQVQVPAYTGPL
ANRHLEVAP

Specific function: May be involved in cell division and sporulation [H]

COG id: COG3879

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0749 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010273 [H]

Pfam domain/function: PF05949 DUF881 [H]

EC number: NA

Molecular weight: Translated: 27300; Mature: 27300

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQLLPQHRAILSLFALLFGGLFVGMLMSVRPQVALSSSSSSRNSSASLSVDRIGTLREH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEHHHHHHHHHH
QQELNAELSRLRDEQAELQQQSTSSQSNFEEIRTQIDQQQQMAALVAMRGPGVVVTLNDS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
NANSLPDEVADVNRYIIHQQQLVTLVGVLWSNGAEAISINDQRITDQTSIYCVGSTILIN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCEEEEECCEEEEC
QELMAPPFTIRAIGDPNTLANAASNSPLLSDLWNRQREFGIGVDVKQKAQVQVPAYTGPL
HHHCCCCEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC
ANRHLEVAP
CCCEEECCC
>Mature Secondary Structure
MRQLLPQHRAILSLFALLFGGLFVGMLMSVRPQVALSSSSSSRNSSASLSVDRIGTLREH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEHHHHHHHHHH
QQELNAELSRLRDEQAELQQQSTSSQSNFEEIRTQIDQQQQMAALVAMRGPGVVVTLNDS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
NANSLPDEVADVNRYIIHQQQLVTLVGVLWSNGAEAISINDQRITDQTSIYCVGSTILIN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCEEEEECCEEEEC
QELMAPPFTIRAIGDPNTLANAASNSPLLSDLWNRQREFGIGVDVKQKAQVQVPAYTGPL
HHHCCCCEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC
ANRHLEVAP
CCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2556375; 9384377; 12207695 [H]