Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898793

Identifier: 159898793

GI number: 159898793

Start: 2907598

End: 2908737

Strand: Reverse

Name: 159898793

Synonym: Haur_2272

Alternate gene names: NA

Gene position: 2908737-2907598 (Counterclockwise)

Preceding gene: 159898800

Following gene: 159898792

Centisome position: 45.83

GC content: 52.89

Gene sequence:

>1140_bases
ATGGATGGACTGAACAAACCTCATTCACGGCGAAAGTTTCTGACGACGAGCGGCTTGGCGGCAGTTGCAGCTGGTAGCGT
GTTGGGCAAGCACGGGCAGGCCGCAGCGGCTCCAGCGAGTGCCCCCAATTCAGGCTTAACCGCAACCAATGCGATGGAAT
TGCCACCAAGTGCCAAAATCAGTATTCGCTGCTTGCGCTCACTGACCATGCTAACCATGAGTTCGCAGCTAACTGATCCC
GCATTTAGTGCCGAAGTCTACGAAATTGGCCTCAAAGATCTCGAAAGTAACCTACAAGAGCTAATCGGACTGGGCACCAG
CGATCTGGTGAGCTATCGGCCAAACCCCGAAGAGAGTTTGCCGACGCGGCCATGGTGGTGGCCCAAACGACGTGTTCGCC
ATTATCGCGGCCAACTCAGCCATGAATCGATCCCCGACGCTGGCCAACTTATCTTGGATATTATACGCAGCCTTGATGGC
TATACGGTAGCATTTTATTCGCAACAGCTTGAATTTGCCGAATTGAGCCAACATTTGGCCTTGGTTGAAATGCAAACCCA
GTTCCAACGCTTGATCAATGCGCCAAGTTTGGCGGGCTTATTCCCTGATGACGATGATATTTGCCCGTGGTGGTGGCCGT
ATCCCCAGCCGAATTGGCTGCATTTGCACGACCGTGATTGGCCTGTACCACCAATTCCGATTCCTCCCTGCGATTTACGC
GAGTTGGCGGTGAATGTGCAGCGCGGTTTAATTCAACTGGCAGTTGCTGAGCGCTATAGCGATAGCGAACAAGCCAGCTA
TCGGCGTGACAGTATCCGCCCAACCATTCACGATCTGGCCAATCAGCTGTCGGCCTATGCTGGCACACTAACAGGTTGGC
TTGAGCATGATATCGTCGATCGACCACCACCAGATCCTAACGATCCTTATCCATGGCCATTCCACGATGGTTTAATTGAT
GAATTGGTTGATTTTGCCGATCGTCCGCCACCACAACCCTATCGAATTAAACTTGGCGACCAAATTATGCGAGCGAGCCA
CTTGGTTGGCGTGGCCTGCCACATTCGGGAACGGCACTTGGCTGGGCGGTTGCAGGATGCCAGTCTGACCCAAATTAAGG
ATCTCGCCTACCAAATCTAA

Upstream 100 bases:

>100_bases
CCATCGGAAAAGCCTTCAATAGGTTGGTAGAAAATGTCAAGTTTTAAGCAATATATTGAGCTAAGCTAGCGCCATCGAAT
TAACCAACAGGAGTTGTGTG

Downstream 100 bases:

>100_bases
ACTGGACGTGCTTAGATTTAGCCCTTTTTCCAGATTATGGAAGAAGGGCTTTTGGTTGTTACTCTCATACCATCGCCTAT
CGCAACACCATGATTTAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MDGLNKPHSRRKFLTTSGLAAVAAGSVLGKHGQAAAAPASAPNSGLTATNAMELPPSAKISIRCLRSLTMLTMSSQLTDP
AFSAEVYEIGLKDLESNLQELIGLGTSDLVSYRPNPEESLPTRPWWWPKRRVRHYRGQLSHESIPDAGQLILDIIRSLDG
YTVAFYSQQLEFAELSQHLALVEMQTQFQRLINAPSLAGLFPDDDDICPWWWPYPQPNWLHLHDRDWPVPPIPIPPCDLR
ELAVNVQRGLIQLAVAERYSDSEQASYRRDSIRPTIHDLANQLSAYAGTLTGWLEHDIVDRPPPDPNDPYPWPFHDGLID
ELVDFADRPPPQPYRIKLGDQIMRASHLVGVACHIRERHLAGRLQDASLTQIKDLAYQI

Sequences:

>Translated_379_residues
MDGLNKPHSRRKFLTTSGLAAVAAGSVLGKHGQAAAAPASAPNSGLTATNAMELPPSAKISIRCLRSLTMLTMSSQLTDP
AFSAEVYEIGLKDLESNLQELIGLGTSDLVSYRPNPEESLPTRPWWWPKRRVRHYRGQLSHESIPDAGQLILDIIRSLDG
YTVAFYSQQLEFAELSQHLALVEMQTQFQRLINAPSLAGLFPDDDDICPWWWPYPQPNWLHLHDRDWPVPPIPIPPCDLR
ELAVNVQRGLIQLAVAERYSDSEQASYRRDSIRPTIHDLANQLSAYAGTLTGWLEHDIVDRPPPDPNDPYPWPFHDGLID
ELVDFADRPPPQPYRIKLGDQIMRASHLVGVACHIRERHLAGRLQDASLTQIKDLAYQI
>Mature_379_residues
MDGLNKPHSRRKFLTTSGLAAVAAGSVLGKHGQAAAAPASAPNSGLTATNAMELPPSAKISIRCLRSLTMLTMSSQLTDP
AFSAEVYEIGLKDLESNLQELIGLGTSDLVSYRPNPEESLPTRPWWWPKRRVRHYRGQLSHESIPDAGQLILDIIRSLDG
YTVAFYSQQLEFAELSQHLALVEMQTQFQRLINAPSLAGLFPDDDDICPWWWPYPQPNWLHLHDRDWPVPPIPIPPCDLR
ELAVNVQRGLIQLAVAERYSDSEQASYRRDSIRPTIHDLANQLSAYAGTLTGWLEHDIVDRPPPDPNDPYPWPFHDGLID
ELVDFADRPPPQPYRIKLGDQIMRASHLVGVACHIRERHLAGRLQDASLTQIKDLAYQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42525; Mature: 42525

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGLNKPHSRRKFLTTSGLAAVAAGSVLGKHGQAAAAPASAPNSGLTATNAMELPPSAKI
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
SIRCLRSLTMLTMSSQLTDPAFSAEVYEIGLKDLESNLQELIGLGTSDLVSYRPNPEESL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
PTRPWWWPKRRVRHYRGQLSHESIPDAGQLILDIIRSLDGYTVAFYSQQLEFAELSQHLA
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
LVEMQTQFQRLINAPSLAGLFPDDDDICPWWWPYPQPNWLHLHDRDWPVPPIPIPPCDLR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHH
ELAVNVQRGLIQLAVAERYSDSEQASYRRDSIRPTIHDLANQLSAYAGTLTGWLEHDIVD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
RPPPDPNDPYPWPFHDGLIDELVDFADRPPPQPYRIKLGDQIMRASHLVGVACHIRERHL
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
AGRLQDASLTQIKDLAYQI
HCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDGLNKPHSRRKFLTTSGLAAVAAGSVLGKHGQAAAAPASAPNSGLTATNAMELPPSAKI
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
SIRCLRSLTMLTMSSQLTDPAFSAEVYEIGLKDLESNLQELIGLGTSDLVSYRPNPEESL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
PTRPWWWPKRRVRHYRGQLSHESIPDAGQLILDIIRSLDGYTVAFYSQQLEFAELSQHLA
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
LVEMQTQFQRLINAPSLAGLFPDDDDICPWWWPYPQPNWLHLHDRDWPVPPIPIPPCDLR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHH
ELAVNVQRGLIQLAVAERYSDSEQASYRRDSIRPTIHDLANQLSAYAGTLTGWLEHDIVD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
RPPPDPNDPYPWPFHDGLIDELVDFADRPPPQPYRIKLGDQIMRASHLVGVACHIRERHL
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
AGRLQDASLTQIKDLAYQI
HCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA