| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898741
Identifier: 159898741
GI number: 159898741
Start: 2819493
End: 2820467
Strand: Reverse
Name: 159898741
Synonym: Haur_2220
Alternate gene names: NA
Gene position: 2820467-2819493 (Counterclockwise)
Preceding gene: 159898744
Following gene: 159898740
Centisome position: 44.44
GC content: 48.72
Gene sequence:
>975_bases ATGAATTTGACTGAGCCATTCGATGATCAAGCGCAATATCAGGCGGTTTGTCGCTTAATCGAGGTCGATTTGGCGGCCTT GCCTGAAGCGTTGGCCCAGGCCTTACAAGCAGCGTTTGCTGAATTCAAACAGGGCAAATTTAGCCAAATTGCGGCTTTAT TGCCAGCTTGGTTGGGCCAACAATTTCCAGTCGCAACGCCAGTGTATGCCCAACTTGGCGCGGCTCAATTGTATGGCTGG TGGTATTATTGGGCGCAAGATCAGCTGTTGGATGGCGATGGGGCGGCTGATTTGCTGCTTGGGGCGCATCTGGCATTGTT GCGTCAGATTGAGTTGTATACTGAATTGGGTGTGACCCAAAGCCCAATCTGGCCCTTGTTTCGCCAATTAACGGTGCAAT CAGCCTTGGGGCATCAGCAGGAATTACGCTATCGTTTAAGCGAATTAAGCGTGTTAGGCTTTGAGCAGTTGGCAACCTTT GATCAAACGGTGTTGTTGGCTCGTGCTCAGCCGTTTTTCTTTTGTAGCCGTGCGCAGGCTTGGCTAGCAGGCGCTGATCC ATTTGGTGCTGCGGCGAATCTGGTGATTGAAGCACTTGAAATCTTGACCCTCGCCCGCCAACTGAGCGACGATGCCAGCG ATTGGATTGATGAACTCAAGCAGGATAAACTCAATAGTGTGGCCTGTCGCTTTTTGGGCTATTTGCAGCAACAGGCGGTT TTTACTGATTTTAGCCAATTGACGGCGGCCCAAGTCGCTGGACAACAAATTTTGCATGAAGCGTTTTGGCCTGCGCTTGA ACAGCAAAATCAGCGTTTGATTGAGCAAACATTGCAAAAATTAGATGCAGCAAATCAGCAGCAATTGGCTGGTTTGTTGC GCCATCAAGCCAAATTGAATCATGATCTTTGGGAAAATCATGCGATCTATCGCCAACAATTACGTGGTTTTTTTGGTTTA GCAGCGAGTGAATAA
Upstream 100 bases:
>100_bases AATCTGCTGTACTGTACTAGGCCTTGAGGGCTAAAGTTCAATGCTTAGCCTGGTGTATGCTCCAAGGCAGCAATAACCTT GTAGCAATAAAGGAACTCCA
Downstream 100 bases:
>100_bases TTCTTTATGAAAACGCACTACGAGGTGCTAGGGGTTGCCAGCAACGCCGATGCCGCCACAATCGACGCAGCATTTCGGCG TTTGGCCCGCCAATATCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MNLTEPFDDQAQYQAVCRLIEVDLAALPEALAQALQAAFAEFKQGKFSQIAALLPAWLGQQFPVATPVYAQLGAAQLYGW WYYWAQDQLLDGDGAADLLLGAHLALLRQIELYTELGVTQSPIWPLFRQLTVQSALGHQQELRYRLSELSVLGFEQLATF DQTVLLARAQPFFFCSRAQAWLAGADPFGAAANLVIEALEILTLARQLSDDASDWIDELKQDKLNSVACRFLGYLQQQAV FTDFSQLTAAQVAGQQILHEAFWPALEQQNQRLIEQTLQKLDAANQQQLAGLLRHQAKLNHDLWENHAIYRQQLRGFFGL AASE
Sequences:
>Translated_324_residues MNLTEPFDDQAQYQAVCRLIEVDLAALPEALAQALQAAFAEFKQGKFSQIAALLPAWLGQQFPVATPVYAQLGAAQLYGW WYYWAQDQLLDGDGAADLLLGAHLALLRQIELYTELGVTQSPIWPLFRQLTVQSALGHQQELRYRLSELSVLGFEQLATF DQTVLLARAQPFFFCSRAQAWLAGADPFGAAANLVIEALEILTLARQLSDDASDWIDELKQDKLNSVACRFLGYLQQQAV FTDFSQLTAAQVAGQQILHEAFWPALEQQNQRLIEQTLQKLDAANQQQLAGLLRHQAKLNHDLWENHAIYRQQLRGFFGL AASE >Mature_324_residues MNLTEPFDDQAQYQAVCRLIEVDLAALPEALAQALQAAFAEFKQGKFSQIAALLPAWLGQQFPVATPVYAQLGAAQLYGW WYYWAQDQLLDGDGAADLLLGAHLALLRQIELYTELGVTQSPIWPLFRQLTVQSALGHQQELRYRLSELSVLGFEQLATF DQTVLLARAQPFFFCSRAQAWLAGADPFGAAANLVIEALEILTLARQLSDDASDWIDELKQDKLNSVACRFLGYLQQQAV FTDFSQLTAAQVAGQQILHEAFWPALEQQNQRLIEQTLQKLDAANQQQLAGLLRHQAKLNHDLWENHAIYRQQLRGFFGL AASE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36332; Mature: 36332
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTEPFDDQAQYQAVCRLIEVDLAALPEALAQALQAAFAEFKQGKFSQIAALLPAWLGQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC QFPVATPVYAQLGAAQLYGWWYYWAQDQLLDGDGAADLLLGAHLALLRQIELYTELGVTQ CCCCCCHHHHHHHHHHHHHHHHEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC SPIWPLFRQLTVQSALGHQQELRYRLSELSVLGFEQLATFDQTVLLARAQPFFFCSRAQA CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH WLAGADPFGAAANLVIEALEILTLARQLSDDASDWIDELKQDKLNSVACRFLGYLQQQAV HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTDFSQLTAAQVAGQQILHEAFWPALEQQNQRLIEQTLQKLDAANQQQLAGLLRHQAKLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH HDLWENHAIYRQQLRGFFGLAASE HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNLTEPFDDQAQYQAVCRLIEVDLAALPEALAQALQAAFAEFKQGKFSQIAALLPAWLGQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC QFPVATPVYAQLGAAQLYGWWYYWAQDQLLDGDGAADLLLGAHLALLRQIELYTELGVTQ CCCCCCHHHHHHHHHHHHHHHHEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC SPIWPLFRQLTVQSALGHQQELRYRLSELSVLGFEQLATFDQTVLLARAQPFFFCSRAQA CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH WLAGADPFGAAANLVIEALEILTLARQLSDDASDWIDELKQDKLNSVACRFLGYLQQQAV HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTDFSQLTAAQVAGQQILHEAFWPALEQQNQRLIEQTLQKLDAANQQQLAGLLRHQAKLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH HDLWENHAIYRQQLRGFFGLAASE HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA