| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898739
Identifier: 159898739
GI number: 159898739
Start: 2818053
End: 2818493
Strand: Reverse
Name: 159898739
Synonym: Haur_2218
Alternate gene names: NA
Gene position: 2818493-2818053 (Counterclockwise)
Preceding gene: 159898740
Following gene: 159898733
Centisome position: 44.41
GC content: 49.89
Gene sequence:
>441_bases ATGCAGATGCTACGTTGTGTCCCCCATCAACGAGTGCTTTTAGCAACCACGCCAGCTCAACCTAGCTGGCGTTTAAAACA GACCATCATTGAATATGAACGTTATGTGCGCCAAATTCCCAACACTGAGCGCTTTGCAATTGTGGGCATGCGGCTGATTC CGCAACCCAATCGTTTGATTAGCTTTCGTGATTTAGCTTTGCGTGATGGGCGCTTTTTGGCCTTCGATGAATTACGTTGG GCAGTGCATGTGGTTGGCCAAACCTTAATCAACGTGTTGGCCGAACAACAAGTCCAAGGCCGCTTGATTACGGGCTTGCA CTGCGATATTACGGCCTGTGTGGTGCATCCGGTCGATTCGGCTGAGCGCCATTTTGTGCAAACAACCCGCACTATTTTAG AGCGCTGCTTTAACGATGCGCAGCTTGAGCAGTTTGAGTGA
Upstream 100 bases:
>100_bases CGGCAGTGCCATTGGCTTGCTGGTTGGGGCTAGCTTGATTGGTGGCTTAGTGGGCTATGTCTATGCCATGCGCCAACAAG CCAAGGTTTAGAGGTGCAGC
Downstream 100 bases:
>100_bases TTGATCTGCTTTATCTCCTGCTCACAACGCTCAAGCCGATTGACATTCAACAAGGTTTAAACCTGCAACAAGCCAATAAT GCGCCCTAGATCTGGCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MQMLRCVPHQRVLLATTPAQPSWRLKQTIIEYERYVRQIPNTERFAIVGMRLIPQPNRLISFRDLALRDGRFLAFDELRW AVHVVGQTLINVLAEQQVQGRLITGLHCDITACVVHPVDSAERHFVQTTRTILERCFNDAQLEQFE
Sequences:
>Translated_146_residues MQMLRCVPHQRVLLATTPAQPSWRLKQTIIEYERYVRQIPNTERFAIVGMRLIPQPNRLISFRDLALRDGRFLAFDELRW AVHVVGQTLINVLAEQQVQGRLITGLHCDITACVVHPVDSAERHFVQTTRTILERCFNDAQLEQFE >Mature_146_residues MQMLRCVPHQRVLLATTPAQPSWRLKQTIIEYERYVRQIPNTERFAIVGMRLIPQPNRLISFRDLALRDGRFLAFDELRW AVHVVGQTLINVLAEQQVQGRLITGLHCDITACVVHPVDSAERHFVQTTRTILERCFNDAQLEQFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17020; Mature: 17020
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMLRCVPHQRVLLATTPAQPSWRLKQTIIEYERYVRQIPNTERFAIVGMRLIPQPNRLI CCCHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEE SFRDLALRDGRFLAFDELRWAVHVVGQTLINVLAEQQVQGRLITGLHCDITACVVHPVDS HHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEEECCCC AERHFVQTTRTILERCFNDAQLEQFE HHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MQMLRCVPHQRVLLATTPAQPSWRLKQTIIEYERYVRQIPNTERFAIVGMRLIPQPNRLI CCCHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEE SFRDLALRDGRFLAFDELRWAVHVVGQTLINVLAEQQVQGRLITGLHCDITACVVHPVDS HHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEEECCCC AERHFVQTTRTILERCFNDAQLEQFE HHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA