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The map label for this gene is alsB [H]

Identifier: 159898725

GI number: 159898725

Start: 2800811

End: 2801818

Strand: Direct

Name: alsB [H]

Synonym: Haur_2204

Alternate gene names: 159898725

Gene position: 2800811-2801818 (Clockwise)

Preceding gene: 159898723

Following gene: 159898726

Centisome position: 44.13

GC content: 51.88

Gene sequence:

>1008_bases
ATGGAAAAGCCAACCAACAAGCCGCAAGTTCTGGTAAACTCCGTCGGATATTCCCGCCGTGATTTTCTGCGTTTCGGGGC
GTTTACCACTGTCGGGCTACTCGCTGGCTGTGGAACCACCAGCGCCACGCCGGTAAGCACCGCCACCCCAACTAAGCCCA
AAATTGGCTTGGTCATGAAATCGCTGAGCAACGAGTTTTTCCAACAAATGCAGGCTGGCGCTGAAGAATATGCCCGCCAA
AATGCAACCCGCTTTGATTTCACCGCCACCGGCATTAACGATGAGCGCGATTTCGCCACCCAAATTGCTTCATTCGAGCG
CTTAGTTAATGAGCAATATGATGTGATTGTGTTGGCTCCCGCCGATTCGATTGCCTTGGTTGCCCCGGTTGCCAAAGCGG
TCAAAGCTGGCATCGTCGTGATCAATATCGACGTTGCGCTTGATGAAGCAACCAAAAAAGCTGCTGGCATCGATCTGGCC
TTTTTTGGCCCCGATAATCGTGCCGGAGCCAAAATGTCGGGCGAGGTGCTGGCCAAAGCCTTAGGCGCAGGCGGCAAAGT
CGCAGTGCTCGAAGGCAATCCAGAGGCCGATAATGCCGTCCAACGCCGCTTAGGCTTCGACGATGCCATCGCCGATGGCA
GCTTAAATTTAGTTGTTGCTGAAAGTGGCCACTGGGAAACCAGCGAAGGCCAAAGCATTACCGCCGCATGGCTCAAAAAA
TATCCCGACTTACAAGGCATCATGTGCGCCAACGATTCAATGGCTTTTGGGGCAGTCCAAGCACTCGAAGCCGCCAATCT
GCTCGATAAAATCAAAGTCGTGGGCTTTGATAACATTCCTGCTGTGCAACCCTTGATCAAAGATGGTAAAATGCTGGCGA
CCGTTGAACAATACGGTGCGCAAATGGCAGCAATCGGTATGGATTATGGCTATCGCACGCTCAAAGGCGAGAAATTTAGC
GGCTGGATTCGCACCGAGCTAAAATTAATCACTAAAGATAATCTCTAG

Upstream 100 bases:

>100_bases
TGCTCGTAAATTTTGACGAATTTAATCAAGATTAATGTGAGAACACAGTAATTTCGTCTCAGGCCTGAATCGTGTTCCCC
ATGTGCAAAAGGATCATCCA

Downstream 100 bases:

>100_bases
ATAATTAGCCAGTTTTTTACTTACAACGAAACTCCAAGTTTAGCACTTGGAGTTTCGTTATGGCTGCAATTAAATGCATT
ATGAGGAGAAGACAAATGGT

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: ALBP [H]

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MEKPTNKPQVLVNSVGYSRRDFLRFGAFTTVGLLAGCGTTSATPVSTATPTKPKIGLVMKSLSNEFFQQMQAGAEEYARQ
NATRFDFTATGINDERDFATQIASFERLVNEQYDVIVLAPADSIALVAPVAKAVKAGIVVINIDVALDEATKKAAGIDLA
FFGPDNRAGAKMSGEVLAKALGAGGKVAVLEGNPEADNAVQRRLGFDDAIADGSLNLVVAESGHWETSEGQSITAAWLKK
YPDLQGIMCANDSMAFGAVQALEAANLLDKIKVVGFDNIPAVQPLIKDGKMLATVEQYGAQMAAIGMDYGYRTLKGEKFS
GWIRTELKLITKDNL

Sequences:

>Translated_335_residues
MEKPTNKPQVLVNSVGYSRRDFLRFGAFTTVGLLAGCGTTSATPVSTATPTKPKIGLVMKSLSNEFFQQMQAGAEEYARQ
NATRFDFTATGINDERDFATQIASFERLVNEQYDVIVLAPADSIALVAPVAKAVKAGIVVINIDVALDEATKKAAGIDLA
FFGPDNRAGAKMSGEVLAKALGAGGKVAVLEGNPEADNAVQRRLGFDDAIADGSLNLVVAESGHWETSEGQSITAAWLKK
YPDLQGIMCANDSMAFGAVQALEAANLLDKIKVVGFDNIPAVQPLIKDGKMLATVEQYGAQMAAIGMDYGYRTLKGEKFS
GWIRTELKLITKDNL
>Mature_335_residues
MEKPTNKPQVLVNSVGYSRRDFLRFGAFTTVGLLAGCGTTSATPVSTATPTKPKIGLVMKSLSNEFFQQMQAGAEEYARQ
NATRFDFTATGINDERDFATQIASFERLVNEQYDVIVLAPADSIALVAPVAKAVKAGIVVINIDVALDEATKKAAGIDLA
FFGPDNRAGAKMSGEVLAKALGAGGKVAVLEGNPEADNAVQRRLGFDDAIADGSLNLVVAESGHWETSEGQSITAAWLKK
YPDLQGIMCANDSMAFGAVQALEAANLLDKIKVVGFDNIPAVQPLIKDGKMLATVEQYGAQMAAIGMDYGYRTLKGEKFS
GWIRTELKLITKDNL

Specific function: Part of the binding-protein-dependent transport system AlsBAC for D-allose [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790526, Length=289, Percent_Identity=34.6020761245675, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1790192, Length=304, Percent_Identity=30.9210526315789, Blast_Score=132, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 35720; Mature: 35720

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKPTNKPQVLVNSVGYSRRDFLRFGAFTTVGLLAGCGTTSATPVSTATPTKPKIGLVMK
CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
SLSNEFFQQMQAGAEEYARQNATRFDFTATGINDERDFATQIASFERLVNEQYDVIVLAP
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC
ADSIALVAPVAKAVKAGIVVINIDVALDEATKKAAGIDLAFFGPDNRAGAKMSGEVLAKA
CCCHHHHHHHHHHHHCCEEEEEEEEEECHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHH
LGAGGKVAVLEGNPEADNAVQRRLGFDDAIADGSLNLVVAESGHWETSEGQSITAAWLKK
HCCCCEEEEECCCCCHHHHHHHHCCCCHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHH
YPDLQGIMCANDSMAFGAVQALEAANLLDKIKVVGFDNIPAVQPLIKDGKMLATVEQYGA
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCCEEEHHHHHCC
QMAAIGMDYGYRTLKGEKFSGWIRTELKLITKDNL
EEEEEECCCCCEECCCCCCCCEEEEEEEEEECCCC
>Mature Secondary Structure
MEKPTNKPQVLVNSVGYSRRDFLRFGAFTTVGLLAGCGTTSATPVSTATPTKPKIGLVMK
CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
SLSNEFFQQMQAGAEEYARQNATRFDFTATGINDERDFATQIASFERLVNEQYDVIVLAP
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC
ADSIALVAPVAKAVKAGIVVINIDVALDEATKKAAGIDLAFFGPDNRAGAKMSGEVLAKA
CCCHHHHHHHHHHHHCCEEEEEEEEEECHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHH
LGAGGKVAVLEGNPEADNAVQRRLGFDDAIADGSLNLVVAESGHWETSEGQSITAAWLKK
HCCCCEEEEECCCCCHHHHHHHHCCCCHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHH
YPDLQGIMCANDSMAFGAVQALEAANLLDKIKVVGFDNIPAVQPLIKDGKMLATVEQYGA
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCCEEEHHHHHCC
QMAAIGMDYGYRTLKGEKFSGWIRTELKLITKDNL
EEEEEECCCCCEECCCCCCCCEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 8576032; 9401019; 10064713 [H]