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The map label for this gene is ybjT [H]

Identifier: 159898723

GI number: 159898723

Start: 2798141

End: 2799001

Strand: Direct

Name: ybjT [H]

Synonym: Haur_2202

Alternate gene names: 159898723

Gene position: 2798141-2799001 (Clockwise)

Preceding gene: 159898722

Following gene: 159898725

Centisome position: 44.09

GC content: 50.87

Gene sequence:

>861_bases
ATGCGCATTTTTCTGACTGGAGCGAGTGGTTTTATTGGGCGGCATGTAGCAGAGGAATTGCACCAAGCAGGCCATCAATT
AACCTGCTTGGTGCGCCAAAAACCAACCACGCCAATCAACTCAGCCACGCAATATGTGGCAGCCGAATGGCTTAAACCGA
CAACGTGGCTCGATCAACTTGCTGAGCATGACATGGTGATTAATTGCGTTGGAATGTTGCGCGAAAGCCGCCAAGCCAGT
TTCCAAGCAGTGCATACCAGCGTGCCAATTGCGCTATTCAAGGCGGCAGCACAATACGGGCTGCAAAAAATTATCCAGAT
TAGTGCCTTGGGAGCCGATGTTGCCGCACCACAAGCGTTTGTGCGCAGCAAAGCGCTGGCTGATCAAGCCCTGAGCCAAC
AATCTGTTCCTTGGGTAGTGTTGCGTCCGAGCTTTGTCTATGGGGCAGGCTGCTATTCGATGGAGCTATTTCGACGCTTA
GCCCGCTTGCCAATCACCCCAATTTTGGGCGATGGCAGTTATCAAGTTCAGCCGATTCAGATCGGCGATCTCGTTCGCGC
AATCAGGCAAGCTGTCGAAGATCCAACAATCACCAATTGCCTAATTGAGGCTGGTGGTAGTGAGCAACTGAGTTTTCGGC
AATTACTTGAGCGCTTGGCTGCTAGCCAAAATCGCCAATTACGCCCGTGGTTTGTGCCAAACTGGTTAACCCAGATCATT
GCACAAATTGGCACAACCACAGGATTAGGGCCAATTAATCGGGCTGAGTTAAGCCTCTTGCTGCAAGGCAACACCTGCGA
TTTAAGTGATTTTCGGCAGCATTTTGGCTTTGAACCACGCCGATTTGAGCCAAACGCCTAA

Upstream 100 bases:

>100_bases
CAGTGCAACCCGAAATTTGCTATGAAATTCAGCCAATTGCCTATCGCTGGTTACGCGGGTATCGACGCAAGGTCTTATTG
AACCAGCACTGAGGTGAGCA

Downstream 100 bases:

>100_bases
AATCAAAAGCCCATGGTCTAGCTAGTCCCATGGGCTTTTGATCTGATAGGTTGCTTAGGTTTTTACAGGATCAATTGAAC
ACTTCCACACACCAAGCGGT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MRIFLTGASGFIGRHVAEELHQAGHQLTCLVRQKPTTPINSATQYVAAEWLKPTTWLDQLAEHDMVINCVGMLRESRQAS
FQAVHTSVPIALFKAAAQYGLQKIIQISALGADVAAPQAFVRSKALADQALSQQSVPWVVLRPSFVYGAGCYSMELFRRL
ARLPITPILGDGSYQVQPIQIGDLVRAIRQAVEDPTITNCLIEAGGSEQLSFRQLLERLAASQNRQLRPWFVPNWLTQII
AQIGTTTGLGPINRAELSLLLQGNTCDLSDFRQHFGFEPRRFEPNA

Sequences:

>Translated_286_residues
MRIFLTGASGFIGRHVAEELHQAGHQLTCLVRQKPTTPINSATQYVAAEWLKPTTWLDQLAEHDMVINCVGMLRESRQAS
FQAVHTSVPIALFKAAAQYGLQKIIQISALGADVAAPQAFVRSKALADQALSQQSVPWVVLRPSFVYGAGCYSMELFRRL
ARLPITPILGDGSYQVQPIQIGDLVRAIRQAVEDPTITNCLIEAGGSEQLSFRQLLERLAASQNRQLRPWFVPNWLTQII
AQIGTTTGLGPINRAELSLLLQGNTCDLSDFRQHFGFEPRRFEPNA
>Mature_286_residues
MRIFLTGASGFIGRHVAEELHQAGHQLTCLVRQKPTTPINSATQYVAAEWLKPTTWLDQLAEHDMVINCVGMLRESRQAS
FQAVHTSVPIALFKAAAQYGLQKIIQISALGADVAAPQAFVRSKALADQALSQQSVPWVVLRPSFVYGAGCYSMELFRRL
ARLPITPILGDGSYQVQPIQIGDLVRAIRQAVEDPTITNCLIEAGGSEQLSFRQLLERLAASQNRQLRPWFVPNWLTQII
AQIGTTTGLGPINRAELSLLLQGNTCDLSDFRQHFGFEPRRFEPNA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=227, Percent_Identity=23.7885462555066, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI87081793, Length=274, Percent_Identity=25.9124087591241, Blast_Score=69, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24667554, Length=243, Percent_Identity=22.6337448559671, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 31661; Mature: 31661

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIFLTGASGFIGRHVAEELHQAGHQLTCLVRQKPTTPINSATQYVAAEWLKPTTWLDQL
CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHH
AEHDMVINCVGMLRESRQASFQAVHTSVPIALFKAAAQYGLQKIIQISALGADVAAPQAF
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VRSKALADQALSQQSVPWVVLRPSFVYGAGCYSMELFRRLARLPITPILGDGSYQVQPIQ
HHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHHHCCCCEEECCCCEEEEEEE
IGDLVRAIRQAVEDPTITNCLIEAGGSEQLSFRQLLERLAASQNRQLRPWFVPNWLTQII
HHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
AQIGTTTGLGPINRAELSLLLQGNTCDLSDFRQHFGFEPRRFEPNA
HHHCCCCCCCCCCHHHEEEEEECCCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRIFLTGASGFIGRHVAEELHQAGHQLTCLVRQKPTTPINSATQYVAAEWLKPTTWLDQL
CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHH
AEHDMVINCVGMLRESRQASFQAVHTSVPIALFKAAAQYGLQKIIQISALGADVAAPQAF
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VRSKALADQALSQQSVPWVVLRPSFVYGAGCYSMELFRRLARLPITPILGDGSYQVQPIQ
HHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHHHCCCCEEECCCCEEEEEEE
IGDLVRAIRQAVEDPTITNCLIEAGGSEQLSFRQLLERLAASQNRQLRPWFVPNWLTQII
HHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
AQIGTTTGLGPINRAELSLLLQGNTCDLSDFRQHFGFEPRRFEPNA
HHHCCCCCCCCCCHHHEEEEEECCCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]