Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898679

Identifier: 159898679

GI number: 159898679

Start: 2719882

End: 2722452

Strand: Reverse

Name: 159898679

Synonym: Haur_2158

Alternate gene names: NA

Gene position: 2722452-2719882 (Counterclockwise)

Preceding gene: 159898680

Following gene: 159898678

Centisome position: 42.9

GC content: 42.75

Gene sequence:

>2571_bases
ATGACGCAATCAACTCTTCAATGGAACGACGCAGTGGTGCATGATCTGTTGCATTATCCTCAGCGGCTTTTACAGCACCA
TGCTTGGTCGGCAGTGATCGCCGAGGCAGGCGGTTTACAGCAGATGCGTCAGCAATTGCTTGATTTTCCGCTAAAAGCCA
AGGAACGGCGGGTTTTAGAAGTTATTTTGAACAACCCTGAAGATTCGGTGGTGCGCTACACCGACCTGCTAGCGATCCAT
CATGCCACCTTTCATCGGCAGCAAAATGCCCTTTGTCGAAGTTTAAGTCAGTTTCTTAATACAGTGCAAGCTCCAGCTGA
ACCGCAAGTGTTGGCTACTCCAGTGGCGAACCCAGTGAGTTTTGTGGTGCCATGGACGAGTTTTATTGGGCGACATGCGG
CGTTAACGACCTTAAAGACGCTTTTAGCAGACGACCATCGCTGGATAACGTTAATTGGTGCTGGTGGCGTAGGCAAAACC
CGCTTGGCGATGGAGTTGGCCCAACAGAGCATTGGTTCGTGCTGTGATGAAGTGCATATGCTACGCTTTGCCGATGTGCA
ACGGGTTGAAGATGTGGGTTTGGCTTGTATCCAGCAATTGCAATTGGTCATTACGGAAGCCCAATCACTCGAGCAGACGC
TGCAACAATTTTTTCAGCAACGGCGCAGCTTGGTGATCGTCGATAATTTGGAGCATATTCCAGCAGCAGGCTTGTGGCTT
GCCCAAGTATTTCAAGCAGTACCGCAGCAACAGGTGATTGCAACGAGTCGGGTGCGCCTGAATGTACCCAACGAACAGCT
TTATGAAGTTGCCGTATTGGATTGTCCTGCGGAAAAAGCTTCGTTCGAGCAGCTTAATCAATCGCCAGCAGTCCAATTGT
GCCTTGATCGCATGGAAGCTGTGCGACTGGTGGATCGTACAAACCATCAATTGCTTGACCTTGTTGGCCAAATTTGTCGG
CAGGTAGCAGGCCTGCCTTTAGCGATTGAGTTGGTTGCCGCTCGAACCGCCGAGTATTCCTTGGAAACGATTCTCGCAGC
GATTACCACCGATCTTGAATTTATTGCTGAAGGCCCGCTGGATTTGGATGCGCGGCAGCAGACGATGGCTGCGACTATTG
GTTGGAGCTATCAACTGTTGCCGGCTCAATCGCAACATATCATGCAGCAACTGGCGGTGTTTCGCGCCGGATGGGATGCA
GCCGCAGCAGCGGCCATTTGTGGGCTTGAGCCTGAGTTGATGGAAGATCATCTAGCCTTATTATTGGATAACCACTTAAT
TAGTTATCGCCTGGATTCTGAGCAGCAGCCATATACGATCTTAGAGCCAATTCGTCAATATGCTTGGCAATTATCGCCTG
CTGAACAACAACACCAACTTCGTTCGCAGCATTGCGATTACTATATTATTTGGGTTGCACCAAGCGAGGAGATCATGCTT
GGGCCGGATGCGGCATTTTGGCATTGTGCGTTCTTGCAATCGTACCCAAATGTGCAATTGGCCTTGCATACGGCCAAAGC
CGATCCAACCCCGCGCCGTTTTTGGCAATTGCTGGGTTCGTTATATCGTTGTTGGTGGAATTTTCAATTAATTGCTGAAG
CCCAATCATGGCTCGAACCCACAATTCCAGTGGTGCTGCAACCAACCAGCGAGCCATATCTGCAATGCCGTGTATTGTAT
TCAATTTTGTTGTTTTGTGCTAAGGATACTGCAAGTTATTCGCGTTTGGCGACTTATCATTATTTAATTAACCTTGCTCA
TCATAATCAATTCTATGTACTCGAAGCAAAAGCCAAAAATTTCTATGCTTTGATCTTAATGGAACAAAATAAATTAGTTG
AAGCCGGTGATTTATTATTAGATGCAGCTACTATCTATCGCCAAATTGGCGATGAGGATAATTTTCTAACACCTATGCTG
AATTATGCCAATCTTCTGTATAAAACAAAAAGATTTGAGCAAGCATGTGATATTTATGATGAATTAATAATTAAATTTGA
GGCAATTAAAGACTATGATGGAATGTATTCGAGTATTAAGAATGTTGCTGTAATTTATGTTTGCCAAGAGAAATATTATG
AAGCCGAGGAGAAATTTCTTTACCTCATTAAACAAGCTGAGGATCGGAAAAATATCGATATTTACCTTGGAGACTTCGAC
ATTTATTTGCGATTAATTAAAATCTATTCTTTTTTAAGAAGAGCCGATGATATAGATATTTATGTGCATAAATTGTATCC
TATATCGATGGGAAGTTTGTTTTTTATTGAACAAGTATTTACACTTTGTGAGACGATTATCTATATAGCTATATTTAAAG
AATATTATTTAGTTGCATATTCAGCATATATATATCTCTTAAATATATTATATCTTGAACATTATGAAATGCGTTGGTAC
GAATCTGAATTTCTAGAACGAACAAAAATTATTCTTAATCAATACTGTGAGGATTTTGATGCACTGATCGATGCTGATTT
CTATTGGGATTTGAATAGTTTTAATGATACAATGAATTATTTTTTGCGAATAATCTATGGATTTCACTCAAACTCCTATA
GTATTAATTGA

Upstream 100 bases:

>100_bases
TAGGGCATTGGTATGCAATTCCAGGGAGTATCCAACGCTTTATCGCTGGTTAGTTAGGTTCGCCGCAGTTTCGCGCAGCA
TGAAAGAATGAGATACCCCT

Downstream 100 bases:

>100_bases
TGGAGATTGGAATACCTATGCCATTTACTGAAGAACAAATTGCAGATTTAATTTATGCACCGGAAAAAGTCATCGATCAA
CCTCAAATTGCTCAACTGAT

Product: ATPase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 856; Mature: 855

Protein sequence:

>856_residues
MTQSTLQWNDAVVHDLLHYPQRLLQHHAWSAVIAEAGGLQQMRQQLLDFPLKAKERRVLEVILNNPEDSVVRYTDLLAIH
HATFHRQQNALCRSLSQFLNTVQAPAEPQVLATPVANPVSFVVPWTSFIGRHAALTTLKTLLADDHRWITLIGAGGVGKT
RLAMELAQQSIGSCCDEVHMLRFADVQRVEDVGLACIQQLQLVITEAQSLEQTLQQFFQQRRSLVIVDNLEHIPAAGLWL
AQVFQAVPQQQVIATSRVRLNVPNEQLYEVAVLDCPAEKASFEQLNQSPAVQLCLDRMEAVRLVDRTNHQLLDLVGQICR
QVAGLPLAIELVAARTAEYSLETILAAITTDLEFIAEGPLDLDARQQTMAATIGWSYQLLPAQSQHIMQQLAVFRAGWDA
AAAAAICGLEPELMEDHLALLLDNHLISYRLDSEQQPYTILEPIRQYAWQLSPAEQQHQLRSQHCDYYIIWVAPSEEIML
GPDAAFWHCAFLQSYPNVQLALHTAKADPTPRRFWQLLGSLYRCWWNFQLIAEAQSWLEPTIPVVLQPTSEPYLQCRVLY
SILLFCAKDTASYSRLATYHYLINLAHHNQFYVLEAKAKNFYALILMEQNKLVEAGDLLLDAATIYRQIGDEDNFLTPML
NYANLLYKTKRFEQACDIYDELIIKFEAIKDYDGMYSSIKNVAVIYVCQEKYYEAEEKFLYLIKQAEDRKNIDIYLGDFD
IYLRLIKIYSFLRRADDIDIYVHKLYPISMGSLFFIEQVFTLCETIIYIAIFKEYYLVAYSAYIYLLNILYLEHYEMRWY
ESEFLERTKIILNQYCEDFDALIDADFYWDLNSFNDTMNYFLRIIYGFHSNSYSIN

Sequences:

>Translated_856_residues
MTQSTLQWNDAVVHDLLHYPQRLLQHHAWSAVIAEAGGLQQMRQQLLDFPLKAKERRVLEVILNNPEDSVVRYTDLLAIH
HATFHRQQNALCRSLSQFLNTVQAPAEPQVLATPVANPVSFVVPWTSFIGRHAALTTLKTLLADDHRWITLIGAGGVGKT
RLAMELAQQSIGSCCDEVHMLRFADVQRVEDVGLACIQQLQLVITEAQSLEQTLQQFFQQRRSLVIVDNLEHIPAAGLWL
AQVFQAVPQQQVIATSRVRLNVPNEQLYEVAVLDCPAEKASFEQLNQSPAVQLCLDRMEAVRLVDRTNHQLLDLVGQICR
QVAGLPLAIELVAARTAEYSLETILAAITTDLEFIAEGPLDLDARQQTMAATIGWSYQLLPAQSQHIMQQLAVFRAGWDA
AAAAAICGLEPELMEDHLALLLDNHLISYRLDSEQQPYTILEPIRQYAWQLSPAEQQHQLRSQHCDYYIIWVAPSEEIML
GPDAAFWHCAFLQSYPNVQLALHTAKADPTPRRFWQLLGSLYRCWWNFQLIAEAQSWLEPTIPVVLQPTSEPYLQCRVLY
SILLFCAKDTASYSRLATYHYLINLAHHNQFYVLEAKAKNFYALILMEQNKLVEAGDLLLDAATIYRQIGDEDNFLTPML
NYANLLYKTKRFEQACDIYDELIIKFEAIKDYDGMYSSIKNVAVIYVCQEKYYEAEEKFLYLIKQAEDRKNIDIYLGDFD
IYLRLIKIYSFLRRADDIDIYVHKLYPISMGSLFFIEQVFTLCETIIYIAIFKEYYLVAYSAYIYLLNILYLEHYEMRWY
ESEFLERTKIILNQYCEDFDALIDADFYWDLNSFNDTMNYFLRIIYGFHSNSYSIN
>Mature_855_residues
TQSTLQWNDAVVHDLLHYPQRLLQHHAWSAVIAEAGGLQQMRQQLLDFPLKAKERRVLEVILNNPEDSVVRYTDLLAIHH
ATFHRQQNALCRSLSQFLNTVQAPAEPQVLATPVANPVSFVVPWTSFIGRHAALTTLKTLLADDHRWITLIGAGGVGKTR
LAMELAQQSIGSCCDEVHMLRFADVQRVEDVGLACIQQLQLVITEAQSLEQTLQQFFQQRRSLVIVDNLEHIPAAGLWLA
QVFQAVPQQQVIATSRVRLNVPNEQLYEVAVLDCPAEKASFEQLNQSPAVQLCLDRMEAVRLVDRTNHQLLDLVGQICRQ
VAGLPLAIELVAARTAEYSLETILAAITTDLEFIAEGPLDLDARQQTMAATIGWSYQLLPAQSQHIMQQLAVFRAGWDAA
AAAAICGLEPELMEDHLALLLDNHLISYRLDSEQQPYTILEPIRQYAWQLSPAEQQHQLRSQHCDYYIIWVAPSEEIMLG
PDAAFWHCAFLQSYPNVQLALHTAKADPTPRRFWQLLGSLYRCWWNFQLIAEAQSWLEPTIPVVLQPTSEPYLQCRVLYS
ILLFCAKDTASYSRLATYHYLINLAHHNQFYVLEAKAKNFYALILMEQNKLVEAGDLLLDAATIYRQIGDEDNFLTPMLN
YANLLYKTKRFEQACDIYDELIIKFEAIKDYDGMYSSIKNVAVIYVCQEKYYEAEEKFLYLIKQAEDRKNIDIYLGDFDI
YLRLIKIYSFLRRADDIDIYVHKLYPISMGSLFFIEQVFTLCETIIYIAIFKEYYLVAYSAYIYLLNILYLEHYEMRWYE
SEFLERTKIILNQYCEDFDALIDADFYWDLNSFNDTMNYFLRIIYGFHSNSYSIN

Specific function: Unknown

COG id: COG3903

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR016032
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 98764; Mature: 98633

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSTLQWNDAVVHDLLHYPQRLLQHHAWSAVIAEAGGLQQMRQQLLDFPLKAKERRVLE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH
VILNNPEDSVVRYTDLLAIHHATFHRQQNALCRSLSQFLNTVQAPAEPQVLATPVANPVS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHH
FVVPWTSFIGRHAALTTLKTLLADDHRWITLIGAGGVGKTRLAMELAQQSIGSCCDEVHM
EEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LRFADVQRVEDVGLACIQQLQLVITEAQSLEQTLQQFFQQRRSLVIVDNLEHIPAAGLWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH
AQVFQAVPQQQVIATSRVRLNVPNEQLYEVAVLDCPAEKASFEQLNQSPAVQLCLDRMEA
HHHHHHCCHHHHHHHCEEEEECCCHHHEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHH
VRLVDRTNHQLLDLVGQICRQVAGLPLAIELVAARTAEYSLETILAAITTDLEFIAEGPL
HHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLDARQQTMAATIGWSYQLLPAQSQHIMQQLAVFRAGWDAAAAAAICGLEPELMEDHLAL
CCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
LLDNHLISYRLDSEQQPYTILEPIRQYAWQLSPAEQQHQLRSQHCDYYIIWVAPSEEIML
HHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCEEE
GPDAAFWHCAFLQSYPNVQLALHTAKADPTPRRFWQLLGSLYRCWWNFQLIAEAQSWLEP
CCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TIPVVLQPTSEPYLQCRVLYSILLFCAKDTASYSRLATYHYLINLAHHNQFYVLEAKAKN
CCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCEEEEEEECCCC
FYALILMEQNKLVEAGDLLLDAATIYRQIGDEDNFLTPMLNYANLLYKTKRFEQACDIYD
EEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELIIKFEAIKDYDGMYSSIKNVAVIYVCQEKYYEAEEKFLYLIKQAEDRKNIDIYLGDFD
HHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH
IYLRLIKIYSFLRRADDIDIYVHKLYPISMGSLFFIEQVFTLCETIIYIAIFKEYYLVAY
HHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAYIYLLNILYLEHYEMRWYESEFLERTKIILNQYCEDFDALIDADFYWDLNSFNDTMNY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
FLRIIYGFHSNSYSIN
HHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TQSTLQWNDAVVHDLLHYPQRLLQHHAWSAVIAEAGGLQQMRQQLLDFPLKAKERRVLE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH
VILNNPEDSVVRYTDLLAIHHATFHRQQNALCRSLSQFLNTVQAPAEPQVLATPVANPVS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHH
FVVPWTSFIGRHAALTTLKTLLADDHRWITLIGAGGVGKTRLAMELAQQSIGSCCDEVHM
EEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LRFADVQRVEDVGLACIQQLQLVITEAQSLEQTLQQFFQQRRSLVIVDNLEHIPAAGLWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH
AQVFQAVPQQQVIATSRVRLNVPNEQLYEVAVLDCPAEKASFEQLNQSPAVQLCLDRMEA
HHHHHHCCHHHHHHHCEEEEECCCHHHEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHH
VRLVDRTNHQLLDLVGQICRQVAGLPLAIELVAARTAEYSLETILAAITTDLEFIAEGPL
HHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLDARQQTMAATIGWSYQLLPAQSQHIMQQLAVFRAGWDAAAAAAICGLEPELMEDHLAL
CCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
LLDNHLISYRLDSEQQPYTILEPIRQYAWQLSPAEQQHQLRSQHCDYYIIWVAPSEEIML
HHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCEEE
GPDAAFWHCAFLQSYPNVQLALHTAKADPTPRRFWQLLGSLYRCWWNFQLIAEAQSWLEP
CCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TIPVVLQPTSEPYLQCRVLYSILLFCAKDTASYSRLATYHYLINLAHHNQFYVLEAKAKN
CCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCEEEEEEECCCC
FYALILMEQNKLVEAGDLLLDAATIYRQIGDEDNFLTPMLNYANLLYKTKRFEQACDIYD
EEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELIIKFEAIKDYDGMYSSIKNVAVIYVCQEKYYEAEEKFLYLIKQAEDRKNIDIYLGDFD
HHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH
IYLRLIKIYSFLRRADDIDIYVHKLYPISMGSLFFIEQVFTLCETIIYIAIFKEYYLVAY
HHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAYIYLLNILYLEHYEMRWYESEFLERTKIILNQYCEDFDALIDADFYWDLNSFNDTMNY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
FLRIIYGFHSNSYSIN
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]