| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898677
Identifier: 159898677
GI number: 159898677
Start: 2717011
End: 2718216
Strand: Direct
Name: 159898677
Synonym: Haur_2156
Alternate gene names: NA
Gene position: 2717011-2718216 (Clockwise)
Preceding gene: 159898675
Following gene: 159898682
Centisome position: 42.81
GC content: 51.16
Gene sequence:
>1206_bases TTGAAGCGTCTATGGCTAAGTACGTTGGTTGTCGGCTGTTTGCTTGGTTTGGCTACTCCTACAAACACTGCTGGGCAGAC TCGTTTGAAAGAAAAAACACCTGAACAATTGGCTGAGGCCGAAGCACCCGCAGTTGCCGGCCAATACCTGATTAAATTTA AGCCTGCGCTGAATACAGCATCTCGCAGCACCACCCTTAAAAACCTCGGAGCCGATCATCTCCAACATCTCGCTAGCCTT GATCTTGAGTTAATTGAATTTGCTCCACTCAAGCAGAACGCTACTCCAGAGCAAACTGAACGAGTGCTGGCCGAGCTAAA AAACCATCCAGCAATTGAATATGTTGAGCCAAACTACCTCTATGCCCCACTGTATACGCCGAACGATCCTGGGTTGGGCC AACAATGGGCTTGGGGAGTCATCAAAGCCTATGATGGTTGGAATATTACCCAAGGTAGCTCTAGCGTGATCATCGCGATT GTTGACACTGGCATCCAAACCAACCACCCTGATCTTGATGCCAAAATTGTGGCTGGCTACGATTTTGTTGATAACGATAC CAACGCGATGGATGGCAATGGTCATGGTACGCACTTAGCAGGCACAGCCGCCGCTGAAACCAACAATAGCACTGGTGGCG CAGGGTTATGCCCCAATTGTCGCTTGATGCCAATCCGTGTTTTCAACAATAATGGCAGTGGTACCCTGGCTGCTGTGGCC CAAGGCATTACTTTTGCTGCCAACAACGGAGCCAAAGTGATCAACTTAGGCTTGGGTGGCAGTGCCTCAACAACCCTGCA AAATGCAGTTAATTACGCGTGGAACAAAGGTGCCTTCTTGACCTGTGCGGTTGGTGGCAGTAACTCGGGCACGCCAACCT ATCCAGCAGCCTACCCCAACTGCTTCCCCGTGGCGGCTAGCGGCAAAACCGATATTAAAACACCTTCCTCAGGCTATGGC ACATGGGTCAAAGTGGCGGCTCCCGGGGCAAGCATCTATTCAACCTGGCTCAACGGCGGCTATACCACAATTAGCGGTAC CTCAACCGCTACCGCCCATGTTTCAGGTTTAGCAGGCTTGTTGGCCTCGCAAAACCGTACCAATGCCCAAATTCGCGATC GCATTTGCGCCACCGCTGATCCAATTGCGGGCACTGGAACTTACTGGTCATGTGGCCGGATTAATGTTTATGCCGCTGTG CAATAA
Upstream 100 bases:
>100_bases TTGTGGTCAACATTGTTGCTCAGGTGCAGGTACGACCGCCAGTTGGAAGCGTACTGGATAACCGTTTGTTGCAACCATTT CATTTGTTGAGGAGGCTCTC
Downstream 100 bases:
>100_bases ACCCATTTTATATTGGATTAACGGCAGCTAGGTGGTCGATGTAATGGGTTAACACCTTGTCACCGTCCCTCACCCCAAGC CTCTCGCCCACGACGACGCA
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKRLWLSTLVVGCLLGLATPTNTAGQTRLKEKTPEQLAEAEAPAVAGQYLIKFKPALNTASRSTTLKNLGADHLQHLASL DLELIEFAPLKQNATPEQTERVLAELKNHPAIEYVEPNYLYAPLYTPNDPGLGQQWAWGVIKAYDGWNITQGSSSVIIAI VDTGIQTNHPDLDAKIVAGYDFVDNDTNAMDGNGHGTHLAGTAAAETNNSTGGAGLCPNCRLMPIRVFNNNGSGTLAAVA QGITFAANNGAKVINLGLGGSASTTLQNAVNYAWNKGAFLTCAVGGSNSGTPTYPAAYPNCFPVAASGKTDIKTPSSGYG TWVKVAAPGASIYSTWLNGGYTTISGTSTATAHVSGLAGLLASQNRTNAQIRDRICATADPIAGTGTYWSCGRINVYAAV Q
Sequences:
>Translated_401_residues MKRLWLSTLVVGCLLGLATPTNTAGQTRLKEKTPEQLAEAEAPAVAGQYLIKFKPALNTASRSTTLKNLGADHLQHLASL DLELIEFAPLKQNATPEQTERVLAELKNHPAIEYVEPNYLYAPLYTPNDPGLGQQWAWGVIKAYDGWNITQGSSSVIIAI VDTGIQTNHPDLDAKIVAGYDFVDNDTNAMDGNGHGTHLAGTAAAETNNSTGGAGLCPNCRLMPIRVFNNNGSGTLAAVA QGITFAANNGAKVINLGLGGSASTTLQNAVNYAWNKGAFLTCAVGGSNSGTPTYPAAYPNCFPVAASGKTDIKTPSSGYG TWVKVAAPGASIYSTWLNGGYTTISGTSTATAHVSGLAGLLASQNRTNAQIRDRICATADPIAGTGTYWSCGRINVYAAV Q >Mature_401_residues MKRLWLSTLVVGCLLGLATPTNTAGQTRLKEKTPEQLAEAEAPAVAGQYLIKFKPALNTASRSTTLKNLGADHLQHLASL DLELIEFAPLKQNATPEQTERVLAELKNHPAIEYVEPNYLYAPLYTPNDPGLGQQWAWGVIKAYDGWNITQGSSSVIIAI VDTGIQTNHPDLDAKIVAGYDFVDNDTNAMDGNGHGTHLAGTAAAETNNSTGGAGLCPNCRLMPIRVFNNNGSGTLAAVA QGITFAANNGAKVINLGLGGSASTTLQNAVNYAWNKGAFLTCAVGGSNSGTPTYPAAYPNCFPVAASGKTDIKTPSSGYG TWVKVAAPGASIYSTWLNGGYTTISGTSTATAHVSGLAGLLASQNRTNAQIRDRICATADPIAGTGTYWSCGRINVYAAV Q
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI31317307, Length=253, Percent_Identity=28.0632411067194, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI76443679, Length=177, Percent_Identity=27.1186440677966, Blast_Score=66, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6320775, Length=283, Percent_Identity=30.0353356890459, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6324576, Length=219, Percent_Identity=31.9634703196347, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6319893, Length=218, Percent_Identity=32.1100917431193, Blast_Score=83, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 41862; Mature: 41862
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLWLSTLVVGCLLGLATPTNTAGQTRLKEKTPEQLAEAEAPAVAGQYLIKFKPALNTA CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHCCCHHCCEEEEEEECCCCCC SRSTTLKNLGADHLQHLASLDLELIEFAPLKQNATPEQTERVLAELKNHPAIEYVEPNYL HHHHHHHHCCHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEE YAPLYTPNDPGLGQQWAWGVIKAYDGWNITQGSSSVIIAIVDTGIQTNHPDLDAKIVAGY EEEEECCCCCCCCCCCCCEEEEEECCCCEECCCCCEEEEEEECCCCCCCCCCCEEEEECC DFVDNDTNAMDGNGHGTHLAGTAAAETNNSTGGAGLCPNCRLMPIRVFNNNGSGTLAAVA EEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEHHHHH QGITFAANNGAKVINLGLGGSASTTLQNAVNYAWNKGAFLTCAVGGSNSGTPTYPAAYPN CCEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCC CFPVAASGKTDIKTPSSGYGTWVKVAAPGASIYSTWLNGGYTTISGTSTATAHVSGLAGL CEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHH LASQNRTNAQIRDRICATADPIAGTGTYWSCGRINVYAAVQ HHCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCEEEEEEEC >Mature Secondary Structure MKRLWLSTLVVGCLLGLATPTNTAGQTRLKEKTPEQLAEAEAPAVAGQYLIKFKPALNTA CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHCCCHHCCEEEEEEECCCCCC SRSTTLKNLGADHLQHLASLDLELIEFAPLKQNATPEQTERVLAELKNHPAIEYVEPNYL HHHHHHHHCCHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEE YAPLYTPNDPGLGQQWAWGVIKAYDGWNITQGSSSVIIAIVDTGIQTNHPDLDAKIVAGY EEEEECCCCCCCCCCCCCEEEEEECCCCEECCCCCEEEEEEECCCCCCCCCCCEEEEECC DFVDNDTNAMDGNGHGTHLAGTAAAETNNSTGGAGLCPNCRLMPIRVFNNNGSGTLAAVA EEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEHHHHH QGITFAANNGAKVINLGLGGSASTTLQNAVNYAWNKGAFLTCAVGGSNSGTPTYPAAYPN CCEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCC CFPVAASGKTDIKTPSSGYGTWVKVAAPGASIYSTWLNGGYTTISGTSTATAHVSGLAGL CEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHH LASQNRTNAQIRDRICATADPIAGTGTYWSCGRINVYAAVQ HHCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]