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The map label for this gene is yedY [H]

Identifier: 159898655

GI number: 159898655

Start: 2682249

End: 2683157

Strand: Direct

Name: yedY [H]

Synonym: Haur_2134

Alternate gene names: 159898655

Gene position: 2682249-2683157 (Clockwise)

Preceding gene: 159898654

Following gene: 159898656

Centisome position: 42.26

GC content: 49.83

Gene sequence:

>909_bases
ATGAAAAAGATTCCTTCCTCGGAGATAACACCCGAAGCGTTGTTCTACTCACGTCGCCAATTTATCAAGGGAGCGGCAGC
CTTGGTTGGTAGCGCCACCGTTCTAGCCGCCTGTGGCAGCGAGACCAGTGAAACCAGCGACCTGCCAGCGGGCGTTGATG
TGCAAACACCCTATGAATCAATCATCAATTACAACAATTTTTATGAATTTACCACCAACAAAGAAGCAGTTGCCGATGCT
TCGAAGAATTTTACGACCAACCCATGGACAGTCGAAGTCAGCGGCTTGGTCAACAAACCGCAAACCTTTGCAATCGAAGA
TTTGCTCAAGCAATTTACCCAAGAAGAACGGGTGTATCGGTTGCGCTGTGTTGAAGGCTGGTCGATGGTCATTCCATGGA
CGGGTTTTAGCCTCGCTGGCTTGTTGAAACAAGTCGAGCCAACCAGCGCCGCCAAATATGTGCGCTTTGAAACGGTGATG
CGCCCCGAAGAAATGCCAGGCCAAAGCAGTAGTTATTACACATGGCCGTATGTCGAGGGTTTGCGGCTCGATGAAGCCAT
GCACGATTTAACCTTGATGGCAACTGGCGTGTATGGCAAGCCAATTTTGCCCCAAAATGGCGCACCCTTGCGGCTGGCAG
TGCCATGGAAATATGGATTCAAAAGCATCAAATCAATCGTTAAAATTGAGCTGGTGGCCGAGCAACCAACCAGTTTATGG
ATGAACGCAGCACCTGATGAATATGGGTTTTATGCCAATGTTAATCCCGATGTGCCGCATCCACGCTGGTCGCAAGCCAC
CGAACGCCGCATTGGTGAGGCTGGTCGGCGACGAACCTTGGCCTTCAATGGTTATGCCGATGAAGTTGCTGCGCTCTACA
AAGATCTGGATTTGAAAGCTAACTATTAA

Upstream 100 bases:

>100_bases
TTAATATCTCAGCGCTATACTAACAACAGCAACTTGGATCTATTTGGGCTAGCCAGACGTAGGTTGGGTTAGTGGTTGTT
AATTAATAAGGATGCTGAGC

Downstream 100 bases:

>100_bases
TCTCTCACTAGCCCAAAACGGGCGAGGGATGCATGCTCGATGATTGAAGCGAAGCAGCTTTGATCAGCAACTGGTAAATC
ATAGCAATATCATTAATTAA

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKKIPSSEITPEALFYSRRQFIKGAAALVGSATVLAACGSETSETSDLPAGVDVQTPYESIINYNNFYEFTTNKEAVADA
SKNFTTNPWTVEVSGLVNKPQTFAIEDLLKQFTQEERVYRLRCVEGWSMVIPWTGFSLAGLLKQVEPTSAAKYVRFETVM
RPEEMPGQSSSYYTWPYVEGLRLDEAMHDLTLMATGVYGKPILPQNGAPLRLAVPWKYGFKSIKSIVKIELVAEQPTSLW
MNAAPDEYGFYANVNPDVPHPRWSQATERRIGEAGRRRTLAFNGYADEVAALYKDLDLKANY

Sequences:

>Translated_302_residues
MKKIPSSEITPEALFYSRRQFIKGAAALVGSATVLAACGSETSETSDLPAGVDVQTPYESIINYNNFYEFTTNKEAVADA
SKNFTTNPWTVEVSGLVNKPQTFAIEDLLKQFTQEERVYRLRCVEGWSMVIPWTGFSLAGLLKQVEPTSAAKYVRFETVM
RPEEMPGQSSSYYTWPYVEGLRLDEAMHDLTLMATGVYGKPILPQNGAPLRLAVPWKYGFKSIKSIVKIELVAEQPTSLW
MNAAPDEYGFYANVNPDVPHPRWSQATERRIGEAGRRRTLAFNGYADEVAALYKDLDLKANY
>Mature_302_residues
MKKIPSSEITPEALFYSRRQFIKGAAALVGSATVLAACGSETSETSDLPAGVDVQTPYESIINYNNFYEFTTNKEAVADA
SKNFTTNPWTVEVSGLVNKPQTFAIEDLLKQFTQEERVYRLRCVEGWSMVIPWTGFSLAGLLKQVEPTSAAKYVRFETVM
RPEEMPGQSSSYYTWPYVEGLRLDEAMHDLTLMATGVYGKPILPQNGAPLRLAVPWKYGFKSIKSIVKIELVAEQPTSLW
MNAAPDEYGFYANVNPDVPHPRWSQATERRIGEAGRRRTLAFNGYADEVAALYKDLDLKANY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=334, Percent_Identity=50, Blast_Score=317, Evalue=6e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 33842; Mature: 33842

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIPSSEITPEALFYSRRQFIKGAAALVGSATVLAACGSETSETSDLPAGVDVQTPYES
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCHHH
IINYNNFYEFTTNKEAVADASKNFTTNPWTVEVSGLVNKPQTFAIEDLLKQFTQEERVYR
HCCCCCEEEEECCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEE
LRCVEGWSMVIPWTGFSLAGLLKQVEPTSAAKYVRFETVMRPEEMPGQSSSYYTWPYVEG
EEEECCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCCCCCEEECCCCCC
LRLDEAMHDLTLMATGVYGKPILPQNGAPLRLAVPWKYGFKSIKSIVKIELVAEQPTSLW
CCHHHHHHHHHHEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHEEEEEECCCCHHE
MNAAPDEYGFYANVNPDVPHPRWSQATERRIGEAGRRRTLAFNGYADEVAALYKDLDLKA
ECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCC
NY
CC
>Mature Secondary Structure
MKKIPSSEITPEALFYSRRQFIKGAAALVGSATVLAACGSETSETSDLPAGVDVQTPYES
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCHHH
IINYNNFYEFTTNKEAVADASKNFTTNPWTVEVSGLVNKPQTFAIEDLLKQFTQEERVYR
HCCCCCEEEEECCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEE
LRCVEGWSMVIPWTGFSLAGLLKQVEPTSAAKYVRFETVMRPEEMPGQSSSYYTWPYVEG
EEEECCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCCCCCEEECCCCCC
LRLDEAMHDLTLMATGVYGKPILPQNGAPLRLAVPWKYGFKSIKSIVKIELVAEQPTSLW
CCHHHHHHHHHHEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHEEEEEECCCCHHE
MNAAPDEYGFYANVNPDVPHPRWSQATERRIGEAGRRRTLAFNGYADEVAALYKDLDLKA
ECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCC
NY
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]