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The map label for this gene is yesN [H]

Identifier: 159898644

GI number: 159898644

Start: 2666628

End: 2667872

Strand: Reverse

Name: yesN [H]

Synonym: Haur_2123

Alternate gene names: 159898644

Gene position: 2667872-2666628 (Counterclockwise)

Preceding gene: 159898647

Following gene: 159898643

Centisome position: 42.04

GC content: 55.74

Gene sequence:

>1245_bases
ATGACCTACAAAGTCTTTTTAGTCGAGGACGAGATCATCGCTCGTGAAGGGATTCGCGATGCGATTGACTGGGCAGCGGC
AGGCTATCAGTTTTGCGGCGAGGCATCGGATGGCGAAATCGCACTGCCGCTCATCCGTGAGCGACGACCCGATATCCTTA
TCACCGATATTAAGATGCCGTTTATGGATGGCTTACAGCTGTGTCGAATTGTGAAGGAAACGCTGCCAACCACGAAGATT
ATAATCCTTAGCGGTCATGATGAGTTTCGCTATGCCCAAGAAGCAATGCAAATCGGGGTTACGCAGTACTTGCTGAAGCC
GATTGTTGCCCAAGATCTGCTGGCGGCATTGCGCAAGATCGCCAGCCAGATCGATGGGGAGCGTCAAGCCAAGGCACAAT
TGGAGACGCTCCAAGCGCAGATGTTCGATCACCAACCAATGTTGCGTGAACGCTGCCTGCTTGATCTGGTCTCTGGCAGT
AGCTCGGCAGCCGATTTCATGGAGCAAGCCCGCAACCTTGAAATCGACCTGCTGGCACCATGGTATCAGGTGTTGGTGAT
GCACGCCATGCCACCGAGCGCCGCTACAGCGCCGCTGTATACGCTCTATCAGCAGGTCGATGTGACTGTCGCTGCCAGCT
TAAACCAATCACCGTTGGTCGTGGCCTTTAAGCATGGCCTCGAAGATACCATCTTGATCGTCAGGGGCGAGACTCGCGCT
GATATGACCCAGCAGGCGGAGCGACTAGCCACTGCAATGCGCCAGCGCGTGGCTGAGCAGCTTGGCTGTCGCGCGATTAT
TGGGATCGGCGACCCCACCGAGCGACTCAGCCTGATCCCCCAATCGTTTGCTGAGGCATTGGCGCAGATCAGTAGCTTCG
AGCGCCCAGCGGAGTCTGATCCATCCGATCAGGGACAATTCCACGGCGGGGCGATTATGCTGAAAGCCCTCGCCTATATC
GATACCAATTATGCCGATCCTGCGATGTCGTTGGGCCAAGCGGCGGCCCATGTGTTGCTTAGCCCGACCTATTTTAGTGC
GCTCTTCCGTCGCGAGGTTGGCGAGACCTTTATCGACTACCTGACCCAAGTTCGCATTCGCAAAGCCATCGAACTGCTAC
GCTCGACTTCCCTAACGGCCAGCGAGATCGCTTATCGTATTGGCTATCAGAACCCGCGCTACTTCTACTCGGTGTTTCGC
AAGGTTGTCGGTCAGCCACCCAACGAGTTCCGTCAGCGCTTCTAG

Upstream 100 bases:

>100_bases
TGCATGGCGTATATGGCCTTGGGAGCGTGCACGTCAAGCGAGCTATCTGAGACGCTCAACTATGACGATGGTCGTGCAAC
GAAGCATGCGAGGCGCAACG

Downstream 100 bases:

>100_bases
CACCAACTGTCGCCTCCAGATTACCAGAGGGTTTGTATCATGGATGAAAAGCTGCCAAATCATGAGCCGATGGGAGTTGT
GCTGGCTAGGTGGGCGGCTG

Product: two component AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTYKVFLVEDEIIAREGIRDAIDWAAAGYQFCGEASDGEIALPLIRERRPDILITDIKMPFMDGLQLCRIVKETLPTTKI
IILSGHDEFRYAQEAMQIGVTQYLLKPIVAQDLLAALRKIASQIDGERQAKAQLETLQAQMFDHQPMLRERCLLDLVSGS
SSAADFMEQARNLEIDLLAPWYQVLVMHAMPPSAATAPLYTLYQQVDVTVAASLNQSPLVVAFKHGLEDTILIVRGETRA
DMTQQAERLATAMRQRVAEQLGCRAIIGIGDPTERLSLIPQSFAEALAQISSFERPAESDPSDQGQFHGGAIMLKALAYI
DTNYADPAMSLGQAAAHVLLSPTYFSALFRREVGETFIDYLTQVRIRKAIELLRSTSLTASEIAYRIGYQNPRYFYSVFR
KVVGQPPNEFRQRF

Sequences:

>Translated_414_residues
MTYKVFLVEDEIIAREGIRDAIDWAAAGYQFCGEASDGEIALPLIRERRPDILITDIKMPFMDGLQLCRIVKETLPTTKI
IILSGHDEFRYAQEAMQIGVTQYLLKPIVAQDLLAALRKIASQIDGERQAKAQLETLQAQMFDHQPMLRERCLLDLVSGS
SSAADFMEQARNLEIDLLAPWYQVLVMHAMPPSAATAPLYTLYQQVDVTVAASLNQSPLVVAFKHGLEDTILIVRGETRA
DMTQQAERLATAMRQRVAEQLGCRAIIGIGDPTERLSLIPQSFAEALAQISSFERPAESDPSDQGQFHGGAIMLKALAYI
DTNYADPAMSLGQAAAHVLLSPTYFSALFRREVGETFIDYLTQVRIRKAIELLRSTSLTASEIAYRIGYQNPRYFYSVFR
KVVGQPPNEFRQRF
>Mature_413_residues
TYKVFLVEDEIIAREGIRDAIDWAAAGYQFCGEASDGEIALPLIRERRPDILITDIKMPFMDGLQLCRIVKETLPTTKII
ILSGHDEFRYAQEAMQIGVTQYLLKPIVAQDLLAALRKIASQIDGERQAKAQLETLQAQMFDHQPMLRERCLLDLVSGSS
SAADFMEQARNLEIDLLAPWYQVLVMHAMPPSAATAPLYTLYQQVDVTVAASLNQSPLVVAFKHGLEDTILIVRGETRAD
MTQQAERLATAMRQRVAEQLGCRAIIGIGDPTERLSLIPQSFAEALAQISSFERPAESDPSDQGQFHGGAIMLKALAYID
TNYADPAMSLGQAAAHVLLSPTYFSALFRREVGETFIDYLTQVRIRKAIELLRSTSLTASEIAYRIGYQNPRYFYSVFRK
VVGQPPNEFRQRF

Specific function: Member of the two-component regulatory system yesM/yesN [H]

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788222, Length=119, Percent_Identity=33.6134453781513, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1786251, Length=97, Percent_Identity=34.020618556701, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790299, Length=128, Percent_Identity=30.46875, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1790559, Length=154, Percent_Identity=31.1688311688312, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 46356; Mature: 46225

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYKVFLVEDEIIAREGIRDAIDWAAAGYQFCGEASDGEIALPLIRERRPDILITDIKMP
CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHCCCCCEEEEECCCC
FMDGLQLCRIVKETLPTTKIIILSGHDEFRYAQEAMQIGVTQYLLKPIVAQDLLAALRKI
HHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASQIDGERQAKAQLETLQAQMFDHQPMLRERCLLDLVSGSSSAADFMEQARNLEIDLLAP
HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECH
WYQVLVMHAMPPSAATAPLYTLYQQVDVTVAASLNQSPLVVAFKHGLEDTILIVRGETRA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCEEEEEECCCHH
DMTQQAERLATAMRQRVAEQLGCRAIIGIGDPTERLSLIPQSFAEALAQISSFERPAESD
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PSDQGQFHGGAIMLKALAYIDTNYADPAMSLGQAAAHVLLSPTYFSALFRREVGETFIDY
CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LTQVRIRKAIELLRSTSLTASEIAYRIGYQNPRYFYSVFRKVVGQPPNEFRQRF
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCC
>Mature Secondary Structure 
TYKVFLVEDEIIAREGIRDAIDWAAAGYQFCGEASDGEIALPLIRERRPDILITDIKMP
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHCCCCCEEEEECCCC
FMDGLQLCRIVKETLPTTKIIILSGHDEFRYAQEAMQIGVTQYLLKPIVAQDLLAALRKI
HHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASQIDGERQAKAQLETLQAQMFDHQPMLRERCLLDLVSGSSSAADFMEQARNLEIDLLAP
HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECH
WYQVLVMHAMPPSAATAPLYTLYQQVDVTVAASLNQSPLVVAFKHGLEDTILIVRGETRA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCEEEEEECCCHH
DMTQQAERLATAMRQRVAEQLGCRAIIGIGDPTERLSLIPQSFAEALAQISSFERPAESD
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PSDQGQFHGGAIMLKALAYIDTNYADPAMSLGQAAAHVLLSPTYFSALFRREVGETFIDY
CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LTQVRIRKAIELLRSTSLTASEIAYRIGYQNPRYFYSVFRKVVGQPPNEFRQRF
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]